Xdes009509.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963582015.1
- Location
- OY757036.1:12492411-12503929[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-69 5.7e-65 220.1 21.0 1 270 124 383 124 398 0.90 2 2 1 2.7e+04 -6.7 12.1 1 38 401 438 401 446 0.82
Sequence Information
- Coding Sequence
- ATGGGGCATTGGCTAGAAATGGCAACTCCTGATAACAGCGACGACGAGAGTGGCGATGCCTTCACCGACGCTGACTTCGGTGACTCTGATGATGAAACTGCCCTTGAACACAATGAAAACAAACCCTCTAATATCCCCGTCAATGAAACTGCAAACGCAGAAGTGCAACAAAATTTGACCAATGGTAATTCTCACAGCAATGGATACAAGGAACTTCCAGAAGAATCAAAACTCAATGGACGGAGCAACGGTGAACACTTTTCGAGAGAGGTGGAAAATAGTATTGATTTAGCTGAAGAAGTGAGACGGGATTCACATGGTGATCAAAATCCTTCGATTGTCGGAATTATTGGGGATCAGCATAGTCATGCGGAGCAGCGGTTGGCGGCtcggcgggcggcgcgcgcggaGGCGAGAGAGATCCGCATGAGGGAGCTGGAGAGACAGCAGAGGGAACAGGAGGACCATGCGGACAAGGCGTATGACATGTACGCAGAGACAGTCGGCAGACGGGGTCCCCGGCTGGCAGCGCTCAGTCCGGCCGCCGTGCTTTCACCGCGGCGGAGCTCGGAAGATTCCGCGGATGACACCTTCAGCATCAAAGACTTGAGACATGAGCTAAAGGAGGTTGAGGAGAAGTTCCGCAAGGCGATGATCCTGAATGCCCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCGGGAGCTGCTCCAGGACCGCATCGACGAGCTGCTCGAGGAACACGCGCAACTACAGCGCGAGCACCGCGAGAAGTGTTCGGCTCACGAGCGTCTGCGTCGCGAGCATGTGTGCATAGAGCGGGAGTTGCGAGGCGCAAGAGACTCGGTGCGGGCGAGAGACGCCGCCGCCGCGGCCGCTGGCTTTGTCTTCGCGGAGGCGCCGCCCGCGGCGCACGCGACCGGCTTCGGCGACGTGCCGCCCTTGGCGCTGCTGTCGCAAGAGGCGGATATGCTGCTGGGAGAGGAGGAAGAAACATTAGACGTGCGGTTGCAGAAGCTGGTCAGCTCGAAGCAGGCGCTGGAGGGCGAGGTGCGGCGGCTGAAGCTCACGCTGCACGAGGAGCGCGCCGCGCGGCAGAACGGCGTCGCCAGCCACCACGACGATCTGATCGAGAGCGAACTGGATTCCCTCCGCAAGTCGACCGTGGAGGCGAAGGCCCGGGCGGCGCGCGGCGAGGCGGAGGCCGCGCTgcaggccgccgccgccgcccgcctCGAGGCGCAGCTGCAGCGTCTGCGCGCGCGGCAGGAGACACACGACGAGCTGGAGGAACAACTCAAGCACGAGCGACGCAAGCTGCAGCGAGAGGTCAGTCCACTCTAG
- Protein Sequence
- MGHWLEMATPDNSDDESGDAFTDADFGDSDDETALEHNENKPSNIPVNETANAEVQQNLTNGNSHSNGYKELPEESKLNGRSNGEHFSREVENSIDLAEEVRRDSHGDQNPSIVGIIGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAAVLSPRRSSEDSADDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQRELLQDRIDELLEEHAQLQREHREKCSAHERLRREHVCIERELRGARDSVRARDAAAAAAGFVFAEAPPAAHATGFGDVPPLALLSQEADMLLGEEEETLDVRLQKLVSSKQALEGEVRRLKLTLHEERAARQNGVASHHDDLIESELDSLRKSTVEAKARAARGEAEAALQAAAAARLEAQLQRLRARQETHDELEEQLKHERRKLQREVSPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909728;
- 90% Identity
- iTF_01529209; iTF_00267201;
- 80% Identity
- -