Cbil007932.1
Basic Information
- Insect
- Camptogramma bilineatum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958496255.1
- Location
- OY292456.1:16030395-16050624[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.18 5.1e+03 -2.9 0.5 246 280 72 104 36 106 0.61 2 3 4.5e-70 1.3e-65 222.4 22.9 1 269 123 380 123 400 0.90 3 3 0.64 1.8e+04 -4.7 12.6 207 265 397 458 378 473 0.51
Sequence Information
- Coding Sequence
- ATGGGGCATCGGCTAGAAATGGCGACTCCAGATAACAGCGACGACGAGAGTGGCGATGCCTTCACCGACGCTGACTTTGGAGACTCTGATGATGAAACTGCCCTTGAACATAATGAAAACAAAACCTCTAATATACCCGTCAATGAAACTGCAAATGCAGAAGTTCAACAAAAACTAACAAATGGTAGTTCTCACAGTAATGGATATAAGGAACTTCAAGAAGAATCAACATTCAATGGACGGAGCAACGGTGAACACCATGAAAGTGAGGTGGAAAATAGTGATATAGCAGCAGAAGTGAGACGAGATTCACATGGTGATCAAAACCCTTCGATTGTCGGAATTATGGGGGACCAGCATAGTCATGCGGAGCAGCGGCTGGCGGCTcggcgggcggcgcgcgcgGAGGCGAGAGAGATCCGCATGAGGGAGTTAGAGAGACAGCAGAGAGAACAAGAGGACCATGCGGACAAGGCGTATGACATGTACGCAGAGACAGTTGGTAGACGGGGTCCCCGGCTGGCGGCGCTCAGTCCGGCCGCCGTGCTGTCGCCGCGGCGGAGCTCAGAGGATTCGGATGACACCTTCAGCATCAAAGACTTAAGGCATGAGCTGAAGGAGGTAGAAGAGAAGTTCCGCAAGGCTATGATCCTGAACGCGCAGTTGGACAACGACAAGGCGGCGCTCGGATACCAACGCGAGCTGCTGCAGGACCGTATCGACGAGTTGCACGAAGAACACGCGCAGTTACAGCGCGAGCACCGCGAGAAATGCTCTGCGCACGAGCGCCTGCGTCGCGAGCACGTTTGCATCGAGCGGGAGTTGCGCGGCGCGAGGGACGCCGTGCGGGCGAGggacgccgccgccgccgccgcgggcTTCGTGTTCGCGGAGGCGCCGCCCGCGGCCCACGCGACCGGCTTCGGAGACGTGCCGCCTTTAGCGCTGCTGTCACAGGAGGCGGACATGCTACTGGGAGAGGAGGAGGAAACATTGGACGTGCGGTTGCAGAAGCTGGTTAGCTCTAAGCAATCGTTGGAGTCGGAGGTGCGTAAGCTGAAACTGACGCTTAACGAGGAGCGCGCCGCAAGACAGAACGGCGTCGCCAGCCATCACGACGACCAGCTCGAGTCAGAACTGGAGTCGCTGCGCAAGGCGGCCGTGGAGTCTAAGGCGCGGGCGGCGCGCGCCGAGGCGGAGGCCGCGCTGCAGTGCGCAGGCGCGGCGCGGCTCGAGGCGCAGTTACAGCGTCTGCGCGCCAGGCAGGACTCGCACGACGAACTGGAGGAACAACTCAAGCACGAACGACGCAAGCTGCAGAGAGAGGCGCGGGAGGCACTGAACCGGGTTGAAGAGTTGGAGACAGAGAACAGTCACCTCACAAAGAGACTCGACAAACTCAAGAACGCCAAATCTGCACTGCTCAAGGACCTGTGA
- Protein Sequence
- MGHRLEMATPDNSDDESGDAFTDADFGDSDDETALEHNENKTSNIPVNETANAEVQQKLTNGSSHSNGYKELQEESTFNGRSNGEHHESEVENSDIAAEVRRDSHGDQNPSIVGIMGDQHSHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAAVLSPRRSSEDSDDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQRELLQDRIDELHEEHAQLQREHREKCSAHERLRREHVCIERELRGARDAVRARDAAAAAAGFVFAEAPPAAHATGFGDVPPLALLSQEADMLLGEEEETLDVRLQKLVSSKQSLESEVRKLKLTLNEERAARQNGVASHHDDQLESELESLRKAAVESKARAARAEAEAALQCAGAARLEAQLQRLRARQDSHDELEEQLKHERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00909728;
- 90% Identity
- iTF_01528310;
- 80% Identity
- -