Xict017636.1
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- clz9
- Assembly
- GCA_949128155.2
- Location
- OX421942.2:17059477-17060775[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 1.1e-07 32.6 0.0 6 36 15 45 10 48 0.92
Sequence Information
- Coding Sequence
- atggacAGAAAGAAACGCAAGTGTTATACTAATGTCCAAGTGGCTGAAGCACTTTCATCAATTCGACAAGGTATGAGTATTTACAAAGCCTCGAGACAGTATAATATACCAGAGACTACATTACGGAGTAAACGAGATGAGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACCTAAACGAAGAAAGACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTTACTAAGAATCAATTATTACACACTGTCTCTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGATGGAGTTCCTGGAAAGAAATGGTTTTCAGGGTTTATGCTACGACATCCAGCAGTGTCAAAACGTGTGGCACAAAATCTTTCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCGTGGTTTGATAGAGTAGGatcatattttaaagaaaacgaTTTGCTGCAAGTTCTTCAAGATCCAAAACGTATATTCAACTGCGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGATAGTAAACGAGTATATAACCGCGTTGCAAATGATGAAAAAGAATGTTTGACCGTTTTAGTCAATGTGTCAGCAGATGGTAATGTAGCTCCGCCAATGGTACTTTTCCCCTACAAGAGGCTACCTAACAATATCAAGTCAACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCAGGCTGGATGACTATGGAATCGTTCTATGAATATGTTGCAAATGTGTTTTACCCATGGCTTCAACAACAGGAAATAACACTGcccgttgttttatttttagatggcCATAGTTCACATATATCTCTGCCTTTAACAACTTTTTGCAAGGAAAAAGGGATTGTACTGGTTGCTTTGCTCCCAAATTCAACGCACGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAGGGGACTTGGCGGGATATTGTGAGGGAATTCAGggttaaacataattatgcgaAGCTTAAGCGTACAGACTTTTGTAGAGAagtacaaaaatgttttcacagaAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGACTTTACCCGTTTGATGAACAAAATATTGACTATGATAAACTTTTGTCAAAAGTGAAAAAACACCAAGACAAACTATCTGAAGCCAATCAAAATACTCTATTTAATACTCAACAGATGAGCAATATAGATAACAATGAGCAGTTCAAGAAACAATTGACGAATtga
- Protein Sequence
- MDRKKRKCYTNVQVAEALSSIRQGMSIYKASRQYNIPETTLRSKRDELYENEHCGKQPVLNLNEERQIVDWIHYLGKCGFPVTKNQLLHTVSKLVENLQRPNPFKDGVPGKKWFSGFMLRHPAVSKRVAQNLSTSRNQVTEVALRAWFDRVGSYFKENDLLQVLQDPKRIFNCDETGFFLCPKDKQVLVKKDSKRVYNRVANDEKECLTVLVNVSADGNVAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMTMESFYEYVANVFYPWLQQQEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFCREVQKCFHRSLKPETIMSGFKCCGLYPFDEQNIDYDKLLSKVKKHQDKLSEANQNTLFNTQQMSNIDNNEQFKKQLTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334718;
- 90% Identity
- iTF_00345749; iTF_00358472; iTF_00771816; iTF_01264363; iTF_01367701; iTF_01361526;
- 80% Identity
- -