Ccur021407.1
Basic Information
- Insect
- Clostera curtula
- Gene Symbol
- clz9
- Assembly
- GCA_905475355.1
- Location
- FR997803.1:15976993-15978315[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-10 2e-07 31.6 0.0 1 36 10 45 10 48 0.92
Sequence Information
- Coding Sequence
- ATGGACAGAAAGAAACGCAAGTGTTATACTAATGCGCAAGTGGCTGAAGCACTTTTATCAATTCGACAAGGTATGAGTATTTACAAAGCCTCTAGACAATATAATGTACCTGAGACTACGTTACGGAGTAAACGAGATGAGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTACTTAACGTAAACGAAGAGAGACAAATCATTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTGACAAAAGATCAATTATTACACACTGTCTCTAAGTTAGTTGAAAACCTGCAGCGCCCTAATCCGTTTAAAGATGGAGTTCCAGGAAAAAAATGGTTTAATGGTTTTATGCTAAGACATCCAACAGTGTCAAAACGTGTGTCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGTATTGCGAGCGTGGTTTGGTCGTGTAGGATCATATTTTAAAGAAAACGATTTGCTACAAGTTTTTCAAGATCCGAAACGTATATTCAACTGTGATGAAACTGGGTTTTTTCTTTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATATAATCGCGTTGCAAATGACGAAAAAGAATGCTTGACCGTATTAGTCAATGTTTCAGCAGATGGTAATGTAGCTCCGCCAATGGTACTTTTCCCTTACAAGAGGCTTCCTAATAATATCAAGTCCACGGTTCCTTCGTGGTGGGGACTTGGTAACACAGAATCGGGCTGGATGAATATGGAGTCATTTTATGAATATATTGCAAATGTGTTTTACCCATGGCTTCGACAACAAAAAATTACACTGCCCGTTGTTTTATTTTTAGATGGCCATAGTTCGCATATATCTCTGCCGTTAACAACTTTTTGCAAGGAAAAAGGGATCGTGCTAGTTGCTTTGCTCCCAAATTCAACGCACATCTTACAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAGGGGACTTGGAGGGATATTGTGAGGGAATTCAGGGTTAAACATAATTATGCGAAGCTTAAGCGCACTGATTTTTCTAGAGAAGTGCAAAAATGTTTTGACAGAAGCCTCAAGCCTGATACCATAATGAGCGGATTCAAATGCTGCGGTCTTTACCCGTTTAATGAACTAAATATTGATTATGATAAACTTTTGTCAAAAGTGAAGAAACATCAATACAAACTATCTGAAGCCAATCAAAATACCCCATTAGAGACTCAACAGATAAGCCAAATAGATAGCAATGAGCAGTTCAAGAAACAATTTGAAAGCCGATTATCACAAGATACATTAAAATAA
- Protein Sequence
- MDRKKRKCYTNAQVAEALLSIRQGMSIYKASRQYNVPETTLRSKRDELYENEHCGKQPVLNVNEERQIIDWIHYLGKCGFPVTKDQLLHTVSKLVENLQRPNPFKDGVPGKKWFNGFMLRHPTVSKRVSQNLPTSRNQVTEVVLRAWFGRVGSYFKENDLLQVFQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNVAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMNMESFYEYIANVFYPWLRQQKITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHILQPLDVAVFRPVKGTWRDIVREFRVKHNYAKLKRTDFSREVQKCFDRSLKPDTIMSGFKCCGLYPFNELNIDYDKLLSKVKKHQYKLSEANQNTPLETQQISQIDSNEQFKKQFESRLSQDTLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334718;
- 90% Identity
- iTF_01525892;
- 80% Identity
- -