Hdys015294.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- clz9
- Assembly
- GCA_905332915.1
- Location
- HG995298.1:17001149-17002369[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-11 3.8e-08 34.0 0.0 2 36 11 45 10 48 0.91
Sequence Information
- Coding Sequence
- ATGGACAGAAAGAAACGCAAGTGTTATACTAACGCGCAAGTGACTGAAGCGCTTTCAGCAATTCGACAAGGTATGAGTATTTACAAAGCCTCGAGACAATATAATGTACCAGAGACTACCTTACGGAGTAAACGAGATGAGCTTTACGAGAATGAACATTGTGGTAAGCAACCAGTGCTTAACCCAAACGAAGAGAGACAAATCGTTGATTGGATCCATTACCTTGGTAAATGTGGCTTTCCAGTGACAAAAGATCAATTATTATACACTGTCtataagttagttgaaaacctGCAGCGCCCTAATCCGTTTAAAGATGGAGTTCCAggaaaaaaatggtatttagGTTTTATGCAACGACATCCAGCAATGTCAAAACGTGTGTCACAAAATCTTCCAACAAGTAGAAACCAAGTCACGGAAGTTGCATTGCGAGCATGGTTTGATCGAGTAGGatcatattttaaagaaaacgatTTGCTACAAGTTTTTCAAGACCCAAAACGTATATTCAACTGTGATGAAACTGGGTTTTTTCTGTGTCCAAAAGACAAGCAAGTTTTGGTAAAAAAGGGTAGTAAACGAGTATATAATCGCGTTGCAAATGACGAGAAAGAATGCTTGACCGTATTAGTCAATGTGTCAGCAGATGGTAATGTAGCTCCGCCAATGGTACTATTCCCTTACAAGAGGCTACCTAATAATATCAAGTCAACGGTGCCTTCGTGGTGGGGACTTGGTAACACAGAATCGGGCTGGATGAATATGGAGTCATTCTACGAATATGTTGCAAATGTGTTTTACCCATGGCTTCGACAAAAAGAAATAACACTGcccgttgttttatttttagatggcCATAGTTCACATATATCTCTGCCTTTAACAACTTTTTGCAAGGAAAAAGGGATCGTGCTAGTTGCTTTGCTCCCAAATTCAACGCACGTCTTGCAGCCTCTTGATGTCGCCGTTTTCAGGCCCGTTAAAGGGACTTGGAGGGATATTGTGAGGGAATTCAGggttcaaaataattatgcGAAGCTTAAGCGCACAGACTTTTCTAGAGAAGTGCAAAAATGTTTTGACAGAAGCCTCAAGCCTGAAACAATAATGAGCGGATTCAAATGCTGCGGTCTTTACCCGTTTAatgaacaaaatattaattatgataaacttTTGTCAAAAGTGAAGAAACACCAATCAAAATACCCTATTAGATAG
- Protein Sequence
- MDRKKRKCYTNAQVTEALSAIRQGMSIYKASRQYNVPETTLRSKRDELYENEHCGKQPVLNPNEERQIVDWIHYLGKCGFPVTKDQLLYTVYKLVENLQRPNPFKDGVPGKKWYLGFMQRHPAMSKRVSQNLPTSRNQVTEVALRAWFDRVGSYFKENDLLQVFQDPKRIFNCDETGFFLCPKDKQVLVKKGSKRVYNRVANDEKECLTVLVNVSADGNVAPPMVLFPYKRLPNNIKSTVPSWWGLGNTESGWMNMESFYEYVANVFYPWLRQKEITLPVVLFLDGHSSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRVQNNYAKLKRTDFSREVQKCFDRSLKPETIMSGFKCCGLYPFNEQNINYDKLLSKVKKHQSKYPIR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01334718;
- 90% Identity
- iTF_01525892;
- 80% Identity
- -