Basic Information

Insect: Vanessa tameamea
Gene Symbol: -
Assembly: GCA_037043105.1
Location: CM073304.1:5896258-5902225[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0025 0.18 12.7 4.4 2 21 172 191 171 192 0.94

2 29 1.9 1.4e+02 3.7 1.9 1 23 225 248 225 248 0.95

3 29 0.13 9.7 7.3 1.4 3 23 253 275 252 275 0.91

4 29 0.31 23 6.2 1.5 2 21 279 298 278 299 0.91

5 29 0.0028 0.21 12.6 1.1 2 23 343 365 342 365 0.95

6 29 1.9 1.4e+02 3.7 0.5 3 23 373 392 372 392 0.93

7 29 0.034 2.5 9.2 1.6 1 23 398 420 398 420 0.98

8 29 0.0017 0.12 13.3 0.1 1 23 426 449 426 449 0.97

9 29 0.0027 0.2 12.6 1.3 3 23 460 481 459 481 0.97

10 29 1.2 87 4.3 7.7 1 23 492 514 492 514 0.98

11 29 1.3e-05 0.00093 20.0 0.5 1 21 632 652 632 653 0.95

12 29 0.069 5.1 8.2 0.1 3 23 659 679 658 679 0.96

13 29 0.0009 0.066 14.1 0.1 2 23 685 707 684 707 0.94

14 29 2.9e-05 0.0021 18.8 1.6 1 23 712 734 712 734 0.99

15 29 4.6 3.4e+02 2.5 7.2 1 21 737 757 737 758 0.94

16 29 0.0007 0.051 14.5 0.3 1 23 770 793 770 793 0.93

17 29 0.036 2.6 9.1 3.1 1 23 799 821 799 821 0.96

18 29 1.8 1.3e+02 3.7 0.4 1 23 855 878 855 878 0.88

19 29 2.9 2.1e+02 3.1 0.2 1 16 885 900 885 901 0.89

20 29 0.0011 0.079 13.9 1.2 2 21 1005 1024 1004 1025 0.94

21 29 6 4.4e+02 2.1 0.1 3 23 1032 1053 1031 1053 0.95

22 29 0.47 35 5.6 3.0 1 23 1058 1081 1058 1081 0.94

23 29 3.9e-05 0.0028 18.4 0.1 2 23 1087 1108 1086 1108 0.97

24 29 3.3 2.4e+02 2.9 0.9 2 21 1112 1131 1112 1132 0.90

25 29 0.0001 0.0077 17.1 2.0 1 23 1158 1181 1158 1181 0.95

26 29 0.0015 0.11 13.4 0.4 1 23 1187 1209 1187 1209 0.92

27 29 0.11 8.4 7.5 0.1 1 23 1215 1237 1215 1237 0.97

28 29 0.0061 0.45 11.5 0.8 1 23 1243 1266 1243 1266 0.94

29 29 3.9e-05 0.0029 18.4 3.2 2 23 1273 1295 1272 1295 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0025	0.18	12.7	4.4	2	21	172	191	171	192	0.94
2	29	1.9	1.4e+02	3.7	1.9	1	23	225	248	225	248	0.95
3	29	0.13	9.7	7.3	1.4	3	23	253	275	252	275	0.91
4	29	0.31	23	6.2	1.5	2	21	279	298	278	299	0.91
5	29	0.0028	0.21	12.6	1.1	2	23	343	365	342	365	0.95
6	29	1.9	1.4e+02	3.7	0.5	3	23	373	392	372	392	0.93
7	29	0.034	2.5	9.2	1.6	1	23	398	420	398	420	0.98
8	29	0.0017	0.12	13.3	0.1	1	23	426	449	426	449	0.97
9	29	0.0027	0.2	12.6	1.3	3	23	460	481	459	481	0.97
10	29	1.2	87	4.3	7.7	1	23	492	514	492	514	0.98
11	29	1.3e-05	0.00093	20.0	0.5	1	21	632	652	632	653	0.95
12	29	0.069	5.1	8.2	0.1	3	23	659	679	658	679	0.96
13	29	0.0009	0.066	14.1	0.1	2	23	685	707	684	707	0.94
14	29	2.9e-05	0.0021	18.8	1.6	1	23	712	734	712	734	0.99
15	29	4.6	3.4e+02	2.5	7.2	1	21	737	757	737	758	0.94
16	29	0.0007	0.051	14.5	0.3	1	23	770	793	770	793	0.93
17	29	0.036	2.6	9.1	3.1	1	23	799	821	799	821	0.96
18	29	1.8	1.3e+02	3.7	0.4	1	23	855	878	855	878	0.88
19	29	2.9	2.1e+02	3.1	0.2	1	16	885	900	885	901	0.89
20	29	0.0011	0.079	13.9	1.2	2	21	1005	1024	1004	1025	0.94
21	29	6	4.4e+02	2.1	0.1	3	23	1032	1053	1031	1053	0.95
22	29	0.47	35	5.6	3.0	1	23	1058	1081	1058	1081	0.94
23	29	3.9e-05	0.0028	18.4	0.1	2	23	1087	1108	1086	1108	0.97
24	29	3.3	2.4e+02	2.9	0.9	2	21	1112	1131	1112	1132	0.90
25	29	0.0001	0.0077	17.1	2.0	1	23	1158	1181	1158	1181	0.95
26	29	0.0015	0.11	13.4	0.4	1	23	1187	1209	1187	1209	0.92
27	29	0.11	8.4	7.5	0.1	1	23	1215	1237	1215	1237	0.97
28	29	0.0061	0.45	11.5	0.8	1	23	1243	1266	1243	1266	0.94
29	29	3.9e-05	0.0029	18.4	3.2	2	23	1273	1295	1272	1295	0.95

Sequence Information

Coding Sequence: ATGTCACGACAAGTGGATGTAAAGGCCCTAGTATCGCACGTAGTTCGCGGTGACGGTGTTAATAGGTGCCGAATATGTATGGGAGATACTACAGAAGGACAAGTACACTTAAACGATACGGTTATAATGGACGGTGAAAGACCTGTAACGCTTTCCGAACTCCTGGAGACTGTTACTGGAATCCAGATGCAGCTGGACACAGACGGAGACCTGCCAGCCGGAGTGTGTCCAGAATGCTCGAAATGCGCTTTAAACGCAGCGGAATTCAGAACACTATGCCACCATGCAATCAGCCAGTGGGAGTTAACTATTCAGCTCTTACAAAACTTACCCGGGCAATGTAATGAAAAAATCCAAACAATGTTTGCCATCATAGACAAAAGCCAAATGACTATCATCAATGATGACATGTCTGATGATTCATTCAGCATAAATTCAGCTGCTCAAAGATTAACAGAACACATAAACCCGCAAacgaatatcattaaaaaagataatcaTTTATCATTATGCAAATGTCCGAACTGCGGGAAAGAATTTCAGTATAGCCATCAATTAAGTCACCACTTAAAAGAATCAACGGATCTCAAACGTGCTTGCCATATTTGCTCAAAAATTATGTTACGTAATGATCTAGTCACGCACATGTTAGATGTTCATAAAAAGAATCCATATGATTGCAAAAAATGCCCCGCATTGCTGTATTCTCATAATCAATATATGAGACACTTAACGAAGGCACACACTCGTGGTGCATGTACGTGTATTGAATGTGGTCGTAATTTCCAATCGTCGAACGCTTATCATGCACATGTCTCGGTACACAGACCGAAAAGTTGTCCGAGCTGTGATAAATTGTTCCGCAATCAAACTTGTTACGTTTACCATGTGAAAGAATGTTGCAATTTAGATAGAAACAGAGAAGACACACATCACACAAAGAACAAAGTTACAGTAGACGTCAAGAATGAAAACAGCAAGAGAAATATAAAAGTAGGCCTCCGAGGGAGTGCGGCCAAGGAATGCATATGTGATCACTGTGGGAAGAAGTTTGCAGGGAAAAAGTTTGTCGCAGCACATATACAAATTGTTCACATGAAGAACACCCATCGCCCCTGTGTGTACTGTGGGAAGTTTCTAGCAGCAGCGCATATGACACAGCatgtaaaaaaacatgaatCAGATCCATCATACACATGTCAACATTGCAGTATAGTTCTCAAGACTCGGCTAGGATATATTCAACATTTACGCCTCCACACCGGAGAGAGACCGTACGCGTGTGATATTTGTGGTGAAACATTTTCGGCGTCTTCTAGACGGTCAGAACATATACGTAGAGTACATAAAAGCTCGGATATAATATTGAAGCAAGCGTGTCATTTGTGTCCAGCGAAATTTCGGCTCCCTTATAGATtgaaaaagcatttaaaaacaGTTCACAACGACGAAGGCGATGTGTCGCAATCGCAGTTCGAATGTCAAGTGTGCCACGATAAATTCAGTTCGTGCCGTGGGCTGTTACATCATAGCCGGAAACATCAAAACATAACAGCACCAGACTCATCAGTCATGTTCAAAGTCGAGGAGGAAATCGAACTACCCACGGGCCTGTGCTGCAACTGCACGAACAGCGCCATCTGTGGGTGGCAGTTCAAACAGCTATGTCTCGAATCGAACAAACATTGGAGAAGGACAACGCTGTTGTTATCTAAAACGAGATTTCAGCCAACAAGCAAAGATAAAACATTGTACATCGGCTGCAATACTTTAATAAGggataatattgaaaacaaacacCCAACGGATGCGATCGATAGACTCAACTCGCTCGTCggttcaaagaaaaaaaaaacgagatctaaatataagaaaaaagacGTAGATAACATTTATAAGTGTAAGGATTGTGGCAAAGATTTCACGGTTCCCTATTTCTTGAATCGTCATTTGCTAAGTACGAAAAAACGCGCCTGCACTCTCTGCGGTAAGATTTTACCGAGAGAAAATTTGGCGAGACATTTGAATAAAGTTCACGCTAAGTTTGTGTTGAATTGCAATATCTGCGAGAAATTATTCGATGATCAATTCGATTTGGAAAATCACCAGATAATATTACACGGAGACGGCTCGTATCAATGTAAAATCTGTAAGAATGGCTTTAAAAACGAGAGATCCCTCCGTGCCCACATGTACACACACACCCTGTTCAATTGTTCATCCTGTAACGctagttttgaaaatagaaaatgtTACACGCATCACAGAAAACACTGCGATGGTTCCAAACACACAACAGAAGGTATATACGAATGCAATGATTGCGGTAATATATACACGAAGAAGCCGTCGTTAAAGGTTCACATCGTTCAGAAACATCTGAACGTTCTGCCGTATGTTTGTCAGGTATGCGGAAAACGTAGTTCGACGAAAACTCATCACAAAGCCCATGAACTCATCCACAAAACGGAAAGGAAAGTCTACCAATGTTTCTGCGGTGCGAAGATGCTGACAGAGCTCGGTTTCAATATGCACCAGAGAATACATTCCGGCGAAAAGCCCTACGAATGCACCATATGTGGTGACAGGTTCCTGTCGGCTTCGAGGAGGTTGGATCACATCAAGAGAAGACATAGGAGCAAGGAGATGGCGCACCGTTGTGATCAATGTGAGGCTAGGTTCCCCCAAGAAGAATATTTATTCCCAAAGGGTTTTTGTATATCTTGTACGAGTGTTGCGATTGCATCGTACGAGTTCAGAGTATTTGTACGAAAGTCAGAGAAACTGTGGACAAACTGTATAGAGTCGCTTCAAACGGTACCAACTTTGACGACGTCCCAGAAATCTATTTACGCGATCGTACGCGATAACTTATTAATCCATACCGTCAATAACTTCGAGGGTAACGCGAAGGATTTATTAGACCATCTCACGAATAGATTCGTAGCGAGGAAGATTTTAATAGAGAGGAAACCAAGGCACCCGAGACACCCCAGGGCTGGACCGTCGTGTAGCTGCACGGATTGTGGGAAAAGTTTTCTCAGTCCGTATTACTTGAATATGCATTTGCGTAATAGCGGTCAGAAAGAGGCTTGCTGGCTCTGTGGTGCGATGGTGATAAGAGGGAAAGAGATGCACGAACATATGGCAAAAATACATAAGACCGATATGTTCTTATGTACCGAATGTCCAATGCTCTTTAAAAGTGAGATGGAACGCAAGCGACACGTAAAGAAGTGTCACGGGCCAGGAGTATTGACGTGCGCTGATTGCGGTAGAACATTCCAGAGACCCGGATCGTTCGAAGTGCATCTACAAATGCACGCAGTTAGGACGTGCCGAGCTTGTGGCGCGCAGTTCGCGAATCGCGGTTGTTACAGGGAACACAGGTCGAAATGTGAACCGAACGCTAAACCGGACTTGAAAACGATACCGAGGAATAAGAGATCGAACATTCGAGATCCGGCAACGTTCACTTGTGACTATTGTAATAAAACGTACCATTCGCGTCCGCAGCTAAAGAACCACATATTATGGATACATATGGACATACGACCACATCAGTGTCAATGGTGCGGCAAGCGTTTTTACACTCCAGCGCGTTTAGCTGAACATTCGGTTGTTCACACGCGCGTCAGGAACTTCGAATGTGATATTTGTGGCGCGAAATTAGTATCCAAAATGGCCGCCGTATACCATAGACGAAGGCATACGGGCGAAAGGCCGTACGAATGTCAGGATTGCGGTGAAAAGTTTATATCGTCGTCACGGAGATCAGAACACGCGAAACGTAGACATAATAGAGGTGCTCGGCTCCAATGTACGGAGTGTCATGCGAGTTTTGTTAGGAATCATgagttaaaaaaacatatggATAAAGTTCATAATCCAGATAATCACTTgatggttaaaataaaaaaggaaaagttTTTCCCAATCACGAAAACTGAAAAgctttaa
Protein Sequence: MSRQVDVKALVSHVVRGDGVNRCRICMGDTTEGQVHLNDTVIMDGERPVTLSELLETVTGIQMQLDTDGDLPAGVCPECSKCALNAAEFRTLCHHAISQWELTIQLLQNLPGQCNEKIQTMFAIIDKSQMTIINDDMSDDSFSINSAAQRLTEHINPQTNIIKKDNHLSLCKCPNCGKEFQYSHQLSHHLKESTDLKRACHICSKIMLRNDLVTHMLDVHKKNPYDCKKCPALLYSHNQYMRHLTKAHTRGACTCIECGRNFQSSNAYHAHVSVHRPKSCPSCDKLFRNQTCYVYHVKECCNLDRNREDTHHTKNKVTVDVKNENSKRNIKVGLRGSAAKECICDHCGKKFAGKKFVAAHIQIVHMKNTHRPCVYCGKFLAAAHMTQHVKKHESDPSYTCQHCSIVLKTRLGYIQHLRLHTGERPYACDICGETFSASSRRSEHIRRVHKSSDIILKQACHLCPAKFRLPYRLKKHLKTVHNDEGDVSQSQFECQVCHDKFSSCRGLLHHSRKHQNITAPDSSVMFKVEEEIELPTGLCCNCTNSAICGWQFKQLCLESNKHWRRTTLLLSKTRFQPTSKDKTLYIGCNTLIRDNIENKHPTDAIDRLNSLVGSKKKKTRSKYKKKDVDNIYKCKDCGKDFTVPYFLNRHLLSTKKRACTLCGKILPRENLARHLNKVHAKFVLNCNICEKLFDDQFDLENHQIILHGDGSYQCKICKNGFKNERSLRAHMYTHTLFNCSSCNASFENRKCYTHHRKHCDGSKHTTEGIYECNDCGNIYTKKPSLKVHIVQKHLNVLPYVCQVCGKRSSTKTHHKAHELIHKTERKVYQCFCGAKMLTELGFNMHQRIHSGEKPYECTICGDRFLSASRRLDHIKRRHRSKEMAHRCDQCEARFPQEEYLFPKGFCISCTSVAIASYEFRVFVRKSEKLWTNCIESLQTVPTLTTSQKSIYAIVRDNLLIHTVNNFEGNAKDLLDHLTNRFVARKILIERKPRHPRHPRAGPSCSCTDCGKSFLSPYYLNMHLRNSGQKEACWLCGAMVIRGKEMHEHMAKIHKTDMFLCTECPMLFKSEMERKRHVKKCHGPGVLTCADCGRTFQRPGSFEVHLQMHAVRTCRACGAQFANRGCYREHRSKCEPNAKPDLKTIPRNKRSNIRDPATFTCDYCNKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECQDCGEKFISSSRRSEHAKRRHNRGARLQCTECHASFVRNHELKKHMDKVHNPDNHLMVKIKKEKFFPITKTEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01080912; iTF_01079248; iTF_01506545; iTF_01080088;
90% Identity: iTF_01506545;
80% Identity: -