Basic Information

Insect: Nymphalis io
Gene Symbol: zfh1
Assembly: GCA_905147045.1
Location: LR989924.1:4849544-4855693[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0021 0.19 12.7 4.4 2 21 177 196 176 197 0.94

2 28 1.3 1.2e+02 3.9 1.5 1 23 230 253 230 253 0.95

3 28 0.11 10 7.3 1.4 3 23 258 280 257 280 0.91

4 28 0.017 1.5 9.9 2.7 2 21 284 303 283 304 0.93

5 28 0.0023 0.21 12.6 1.1 2 23 348 370 347 370 0.95

6 28 1.6 1.5e+02 3.7 0.5 3 23 378 397 377 397 0.93

7 28 0.028 2.6 9.2 1.6 1 23 403 425 403 425 0.98

8 28 0.0033 0.3 12.1 0.2 1 23 431 454 431 454 0.97

9 28 0.0096 0.88 10.7 0.8 3 23 465 486 464 486 0.95

10 28 3.1e-05 0.0028 18.5 0.3 1 21 604 624 604 625 0.95

11 28 1.1 99 4.2 0.1 3 23 631 651 630 651 0.92

12 28 0.094 8.6 7.5 0.1 2 23 657 679 656 679 0.91

13 28 9.9e-05 0.009 16.9 2.3 1 23 684 706 684 706 0.99

14 28 0.53 48 5.2 4.8 1 21 709 729 709 730 0.94

15 28 0.0012 0.11 13.5 0.2 1 23 742 765 742 765 0.93

16 28 0.019 1.7 9.8 3.0 1 23 771 793 771 793 0.96

17 28 5.7 5.2e+02 1.9 0.3 1 23 827 850 827 850 0.87

18 28 0.00092 0.084 13.9 0.3 3 23 859 880 858 880 0.98

19 28 0.0009 0.082 13.9 1.2 2 21 994 1013 993 1014 0.94

20 28 4 3.6e+02 2.4 0.1 3 23 1021 1042 1020 1042 0.95

21 28 0.31 28 5.9 2.9 1 23 1047 1070 1047 1070 0.95

22 28 0.00022 0.02 15.9 0.2 2 23 1076 1097 1075 1097 0.96

23 28 2.7 2.5e+02 2.9 0.9 2 21 1101 1120 1101 1121 0.90

24 28 8.7e-05 0.008 17.1 2.0 1 23 1147 1170 1147 1170 0.95

25 28 0.0013 0.12 13.4 0.4 1 23 1176 1198 1176 1198 0.92

26 28 0.095 8.7 7.5 0.1 1 23 1204 1226 1204 1226 0.97

27 28 0.0051 0.47 11.5 0.8 1 23 1232 1255 1232 1255 0.94

28 28 3.3e-05 0.003 18.4 3.2 2 23 1262 1284 1261 1284 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0021	0.19	12.7	4.4	2	21	177	196	176	197	0.94
2	28	1.3	1.2e+02	3.9	1.5	1	23	230	253	230	253	0.95
3	28	0.11	10	7.3	1.4	3	23	258	280	257	280	0.91
4	28	0.017	1.5	9.9	2.7	2	21	284	303	283	304	0.93
5	28	0.0023	0.21	12.6	1.1	2	23	348	370	347	370	0.95
6	28	1.6	1.5e+02	3.7	0.5	3	23	378	397	377	397	0.93
7	28	0.028	2.6	9.2	1.6	1	23	403	425	403	425	0.98
8	28	0.0033	0.3	12.1	0.2	1	23	431	454	431	454	0.97
9	28	0.0096	0.88	10.7	0.8	3	23	465	486	464	486	0.95
10	28	3.1e-05	0.0028	18.5	0.3	1	21	604	624	604	625	0.95
11	28	1.1	99	4.2	0.1	3	23	631	651	630	651	0.92
12	28	0.094	8.6	7.5	0.1	2	23	657	679	656	679	0.91
13	28	9.9e-05	0.009	16.9	2.3	1	23	684	706	684	706	0.99
14	28	0.53	48	5.2	4.8	1	21	709	729	709	730	0.94
15	28	0.0012	0.11	13.5	0.2	1	23	742	765	742	765	0.93
16	28	0.019	1.7	9.8	3.0	1	23	771	793	771	793	0.96
17	28	5.7	5.2e+02	1.9	0.3	1	23	827	850	827	850	0.87
18	28	0.00092	0.084	13.9	0.3	3	23	859	880	858	880	0.98
19	28	0.0009	0.082	13.9	1.2	2	21	994	1013	993	1014	0.94
20	28	4	3.6e+02	2.4	0.1	3	23	1021	1042	1020	1042	0.95
21	28	0.31	28	5.9	2.9	1	23	1047	1070	1047	1070	0.95
22	28	0.00022	0.02	15.9	0.2	2	23	1076	1097	1075	1097	0.96
23	28	2.7	2.5e+02	2.9	0.9	2	21	1101	1120	1101	1121	0.90
24	28	8.7e-05	0.008	17.1	2.0	1	23	1147	1170	1147	1170	0.95
25	28	0.0013	0.12	13.4	0.4	1	23	1176	1198	1176	1198	0.92
26	28	0.095	8.7	7.5	0.1	1	23	1204	1226	1204	1226	0.97
27	28	0.0051	0.47	11.5	0.8	1	23	1232	1255	1232	1255	0.94
28	28	3.3e-05	0.003	18.4	3.2	2	23	1262	1284	1261	1284	0.95

Sequence Information

Coding Sequence: ATGAATTCAACCACAATGTCACGTCAAGTGGATGTAAAGGCCCTGGTATCACATGTAGTTCGCGGTGACGGTGTAAATAGGTGCCGAATATGTATGGGGGATACAACAGAAGGACAAGTACACTTAAGCGACACGGTTATAATGGATGGTGAAAAACCTGTAACGCTTTCTGAACTTCTGGAGACTGTTACTGGAATCCAGATGCAGCTGGATACAGATGGAGACCTGCCAGCGGGAATATGTCCAGAATGCTCAAAATGTGCATTAAATGCCGCCGAATTCAGAACACTGTGTCACCATGCAATCAAGCAATGGGACTTAACTATTCAGCTCTTACAGAATTTACCGGGACAATGTAATGATAAAATCAAAACAATGTTTGCCATAATTGATCAAAGTCAAATGATTATCATTAATGATGATATGTCAGAAGATTCATTCGGTACAAATTCAGCTGCTCAAAGGTTAACTGCGCATGTTAAACCTAAAACGATTGTGAATAAAAAAGATAATAATTTATCATTTTGCAAATGTCCGAACTGTGGAAAGGAATTTCAGTATAGCCATCAATTAAGTCACCACTTGAAAGAATCAACAGATATGAAACGGGCATGCCATATTTGCTCGGAAATCATGTTACGTAATGATTTGGTATCGCACATGTTAGATGTACATAAAAAGAATCCTTATGATTGCAAAAAATGTCCAGCACTGCTATATTCTCATAATCAATATATTAGACATTTAACGAAGGCACACACTCGTGGTGCGTGTACATGTATTGAATGTGGACGGAATTTTCAATCGTCGAATGCATATCATGCGCACGTCTCTGTACACAGACCAAAAAGTTGTCCGAGTTGTGACAAGATGTTCCGCAATCAAACATGCTATGTGCACCACGTGAAGGAATGTTGCAATTTAGATAAAAATAGAGAAGACACACATCACACAAAGAATAAAGTTACAGTAGATGTAATGAATGAAAACAGCAAGAAAAATATTAAAGTAGGTCTCCGCGGGAGTGCGGCTAAGGAATGCATATGTGATCACTGCGGGAAGAAGTTTGCTGGCAAAAAGTTTGTAGCTGCACATATACAAATAGTTCACATGAAGAACACGCATCGACCTTGTGTGTACTGTGGGAAGTTCCTGGCGGCAGCGCATATGACACAGCATGTTAAGAAACACGAAACAGACCCATCGTACACATGTCAGCATTGTAGTATTGTTCTCAAGACTCGACTAGGATATATTCAACATTTGCGCCTCCACACTGGAGAGAGACCGTACGCGTGTGATACTTGCGGAGAATCGTTTTCTGCTTCGTCCAGACGATCGGAACACATACGTAAAGTACATAAAAGCTCAGGTATAATATTGAAGCAAGCTTGTCATTTGTGTCCAGCGAAATTTCGGCTGCCTTACAGATTGAAGAAGCATTTAAAAGCGGTTCATAACGACGAAGGCGACAGCTCATTATCGCAATACGAATGTAAAGTCGAGGAGGAAATCGAACTACCCGCGGGCCTGTGCTGCAACTGCACGAACAGCGCCATCTCTGGGTGGCAGTTCAGACAGCTATGTCTCGAATCGAACAGAAATTGGATGAAAACAACACTATTACTGTCTAAAACGAAAATTCAGCCAACAAACAAAGATAAAACCATTTTCATAGGCTTTAACACTTTGATAAGAGACAACATTGAAAATAAACACACAACAGATGCTGTGGATAGACTTAATACACTCATCGGTTCAAAGAAAAAAACTAGATCTAAATACAAAAAAAATGATATAAGTAACATTTATATGTGTAAGGATTGTGGCAAAGATTTCACGGTTCCGTATTTCTTGAACCGTCATTTACTGAGTACGAAAAAACGCGCTTGCACTCTCTGCGGTAAGATTTTGCCGAGGGAACGTTTGGCTAGACATTTGAACAGAGTTCACGCTAAGTTTGTACTGAATTGCGATATCTGCGAGAAATTATTCGATGAACAACTCGAATTGGAAAAACACAAGATATTATTACACGGCGATGGCTCATATCAATGTAAAACGTGTAAGAATGGATTCAAAAACGAGAGATCTCTCCGTGCACATATGTACACGCACACGCTATTCAATTGCTCGTCCTGTAACGCTAGTTTTGAAAATAGAAAATGTTACACGCACCACAGAAAAATCTGCGACGGCTCTAAACACACAACGGAAGGTATATATGAATGCGACGAATGTGGTAATATATACACGAAGAAGCCATCGTTGAAGGTTCACATCGTTCAGAAACATTTGAACGTTCTGCCGTATGTTTGTCAAATATGCGGGAAACGTAGTTCGACGAAAAATCATCACAAGGCTCATGAACTAATCCACAAAACAGAAAGAAAAGTCTACCAATGTTTCTGCGGTGCGAAAATGCTCACAGAACTCGGTTTCAATATGCACCAGAGAATACATTCTGGGGAAAAGCCTTACGAATGCGGGGTATGTGGTGACAGGTTCCTGTCGGCTTCTAGAAGGTTGGATCACATCAAGAGAAGACACAGGAGTAAGGAGATGGCGCACGGTTGTGACCAATGCGAGGCTAGGTTCGTTAGGCCGTTTGAACTAAAAAAACATTACAAATCGGCGCATTTGATGAGCCCGCAAGAGGAATATTTATTCCCAAAGGGTTTTTGTTCTGATTGCACGAGGGTTGCGATTGCCTCGTACGAGTTCAGAGTGTTTGTACGAAAGTCCGAAAAACTATGGACAAACTGTATAGAATCGCTTCAAACTGTCCCAACTTTGATCACATCCCAAAAATCGATTTACGCTATCGTACGTAATAACTTACTAATTCATACGGTCAGTAACTTCGAGGGTAACGCAAAAGACTTGTTGAACCATCTGACGAATAGATTCGTAGCGAGGAAGATTTTAATAGAGAGGAAGCCGAGGCACCCGAGACACCCCAGGACTGGACCGTCGTGTAGCTGCACGGATTGTGGCAAAAGTTTCCTTAGTCCGTATTATTTAAACATGCACTTGCGTAATAGCGGTCAGAAAGAGGCGTGCTGGCTCTGTGGCGCGATGGTGATAAGAGGGAAGGAGATGCACGAACATATGTCCAAAATTCACAAGACCGACATGTTTTTGTGTACCGAATGCCCGATGCTGTTCAAAAGTGAGCTGGAACGGAAGAGACACATTAAGAAATGTCATGGACCGGGTGTACTGACGTGCGCTGATTGCGGGAGAACGTTCCAGAGGCCCGGATCGTTCGAAGTGCATTCACAAATGCACGCAGTGAGGACGTGCCGGGCTTGTGGCGCACAGTTCGCGAACCGTGGTTGTTACAGAGAACACAGGTCGAAATGCGAACCGAACGCAAAACCAGACTTGAAAACGATACCGAGAAATAAAAGATCGAACATTCGAGATCCCGCTACGTTCACTTGTGACTATTGTAATAAAACGTATCATTCACGTCCGCAGTTAAAAAACCACATTCTATGGATACATATGGACATAAGACCGCACCAGTGTCAATGGTGCGGGAAGCGTTTCTACACTCCAGCGCGTTTAGCTGAACATTCGGTTGTGCACACGCGCGTCAGGAATTTCGAATGCGATATTTGTGGCGCGAAATTAGTATCCAAAATGGCGGCCGTGTACCATAGAAGAAGGCATACGGGCGAAAGGCCATACGAGTGTCAGGATTGCGGTGAAAAGTTTATATCGTCGTCTCGAAGATCAGAACACGCGAAACGCAGGCACAACAGAGGTTCTCGTCTCCAATGTACTGAGTGTCACGCGAGTTTTGTTAGGAACCATGAATTAAAGAAACATATGGATAAAGTTCATAATCCAGATAATCACTTGTTGGTCAAAATAAAAAAAGAAAAGTTTTTCCCAATAGCGACAACTCAAAAACTTTGA
Protein Sequence: MNSTTMSRQVDVKALVSHVVRGDGVNRCRICMGDTTEGQVHLSDTVIMDGEKPVTLSELLETVTGIQMQLDTDGDLPAGICPECSKCALNAAEFRTLCHHAIKQWDLTIQLLQNLPGQCNDKIKTMFAIIDQSQMIIINDDMSEDSFGTNSAAQRLTAHVKPKTIVNKKDNNLSFCKCPNCGKEFQYSHQLSHHLKESTDMKRACHICSEIMLRNDLVSHMLDVHKKNPYDCKKCPALLYSHNQYIRHLTKAHTRGACTCIECGRNFQSSNAYHAHVSVHRPKSCPSCDKMFRNQTCYVHHVKECCNLDKNREDTHHTKNKVTVDVMNENSKKNIKVGLRGSAAKECICDHCGKKFAGKKFVAAHIQIVHMKNTHRPCVYCGKFLAAAHMTQHVKKHETDPSYTCQHCSIVLKTRLGYIQHLRLHTGERPYACDTCGESFSASSRRSEHIRKVHKSSGIILKQACHLCPAKFRLPYRLKKHLKAVHNDEGDSSLSQYECKVEEEIELPAGLCCNCTNSAISGWQFRQLCLESNRNWMKTTLLLSKTKIQPTNKDKTIFIGFNTLIRDNIENKHTTDAVDRLNTLIGSKKKTRSKYKKNDISNIYMCKDCGKDFTVPYFLNRHLLSTKKRACTLCGKILPRERLARHLNRVHAKFVLNCDICEKLFDEQLELEKHKILLHGDGSYQCKTCKNGFKNERSLRAHMYTHTLFNCSSCNASFENRKCYTHHRKICDGSKHTTEGIYECDECGNIYTKKPSLKVHIVQKHLNVLPYVCQICGKRSSTKNHHKAHELIHKTERKVYQCFCGAKMLTELGFNMHQRIHSGEKPYECGVCGDRFLSASRRLDHIKRRHRSKEMAHGCDQCEARFVRPFELKKHYKSAHLMSPQEEYLFPKGFCSDCTRVAIASYEFRVFVRKSEKLWTNCIESLQTVPTLITSQKSIYAIVRNNLLIHTVSNFEGNAKDLLNHLTNRFVARKILIERKPRHPRHPRTGPSCSCTDCGKSFLSPYYLNMHLRNSGQKEACWLCGAMVIRGKEMHEHMSKIHKTDMFLCTECPMLFKSELERKRHIKKCHGPGVLTCADCGRTFQRPGSFEVHSQMHAVRTCRACGAQFANRGCYREHRSKCEPNAKPDLKTIPRNKRSNIRDPATFTCDYCNKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECQDCGEKFISSSRRSEHAKRRHNRGSRLQCTECHASFVRNHELKKHMDKVHNPDNHLLVKIKKEKFFPIATTQKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01508261;
90% Identity: iTF_01506545;
80% Identity: -