Basic Information

Insect: Vanessa atalanta
Gene Symbol: -
Assembly: GCA_905147765.1
Location: LR990578.1:246523-252695[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0021 0.17 12.8 4.4 2 21 172 191 171 192 0.94

2 28 0.99 76 4.4 1.6 1 23 225 248 225 248 0.95

3 28 0.11 8.7 7.3 1.4 3 23 253 275 252 275 0.91

4 28 0.26 20 6.2 1.5 2 21 279 298 278 299 0.91

5 28 0.0024 0.19 12.6 1.1 2 23 343 365 342 365 0.95

6 28 1.6 1.3e+02 3.7 0.5 3 23 373 392 372 392 0.93

7 28 0.029 2.2 9.2 1.6 1 23 398 420 398 420 0.98

8 28 0.0014 0.11 13.3 0.1 1 23 426 449 426 449 0.97

9 28 0.0099 0.76 10.7 0.8 3 23 460 481 459 481 0.95

10 28 1.1e-05 0.00084 20.0 0.5 1 21 600 620 600 621 0.95

11 28 0.059 4.6 8.2 0.1 3 23 627 647 626 647 0.96

12 28 0.00077 0.059 14.2 0.1 2 23 653 675 652 675 0.94

13 28 2.5e-05 0.0019 18.8 1.6 1 23 680 702 680 702 0.99

14 28 2.5 1.9e+02 3.1 4.8 1 21 705 725 705 726 0.94

15 28 0.0006 0.046 14.5 0.3 1 23 738 761 738 761 0.93

16 28 0.017 1.3 9.9 3.1 1 23 767 789 767 789 0.96

17 28 5.9 4.5e+02 1.9 0.3 1 23 823 846 823 846 0.87

18 28 0.00027 0.02 15.6 1.9 1 23 853 876 853 876 0.97

19 28 0.00092 0.071 13.9 1.2 2 21 990 1009 989 1010 0.94

20 28 5.2 4e+02 2.1 0.1 3 23 1017 1038 1016 1038 0.95

21 28 0.4 31 5.6 3.0 1 23 1043 1066 1043 1066 0.94

22 28 3.3e-05 0.0026 18.5 0.1 2 23 1072 1093 1071 1093 0.97

23 28 2.8 2.2e+02 3.0 0.9 2 21 1097 1116 1097 1117 0.90

24 28 9e-05 0.0069 17.1 2.0 1 23 1143 1166 1143 1166 0.95

25 28 0.0013 0.1 13.4 0.4 1 23 1172 1194 1172 1194 0.92

26 28 0.098 7.6 7.5 0.1 1 23 1200 1222 1200 1222 0.97

27 28 0.0052 0.41 11.5 0.8 1 23 1228 1251 1228 1251 0.94

28 28 3.3e-05 0.0026 18.4 3.2 2 23 1258 1280 1257 1280 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0021	0.17	12.8	4.4	2	21	172	191	171	192	0.94
2	28	0.99	76	4.4	1.6	1	23	225	248	225	248	0.95
3	28	0.11	8.7	7.3	1.4	3	23	253	275	252	275	0.91
4	28	0.26	20	6.2	1.5	2	21	279	298	278	299	0.91
5	28	0.0024	0.19	12.6	1.1	2	23	343	365	342	365	0.95
6	28	1.6	1.3e+02	3.7	0.5	3	23	373	392	372	392	0.93
7	28	0.029	2.2	9.2	1.6	1	23	398	420	398	420	0.98
8	28	0.0014	0.11	13.3	0.1	1	23	426	449	426	449	0.97
9	28	0.0099	0.76	10.7	0.8	3	23	460	481	459	481	0.95
10	28	1.1e-05	0.00084	20.0	0.5	1	21	600	620	600	621	0.95
11	28	0.059	4.6	8.2	0.1	3	23	627	647	626	647	0.96
12	28	0.00077	0.059	14.2	0.1	2	23	653	675	652	675	0.94
13	28	2.5e-05	0.0019	18.8	1.6	1	23	680	702	680	702	0.99
14	28	2.5	1.9e+02	3.1	4.8	1	21	705	725	705	726	0.94
15	28	0.0006	0.046	14.5	0.3	1	23	738	761	738	761	0.93
16	28	0.017	1.3	9.9	3.1	1	23	767	789	767	789	0.96
17	28	5.9	4.5e+02	1.9	0.3	1	23	823	846	823	846	0.87
18	28	0.00027	0.02	15.6	1.9	1	23	853	876	853	876	0.97
19	28	0.00092	0.071	13.9	1.2	2	21	990	1009	989	1010	0.94
20	28	5.2	4e+02	2.1	0.1	3	23	1017	1038	1016	1038	0.95
21	28	0.4	31	5.6	3.0	1	23	1043	1066	1043	1066	0.94
22	28	3.3e-05	0.0026	18.5	0.1	2	23	1072	1093	1071	1093	0.97
23	28	2.8	2.2e+02	3.0	0.9	2	21	1097	1116	1097	1117	0.90
24	28	9e-05	0.0069	17.1	2.0	1	23	1143	1166	1143	1166	0.95
25	28	0.0013	0.1	13.4	0.4	1	23	1172	1194	1172	1194	0.92
26	28	0.098	7.6	7.5	0.1	1	23	1200	1222	1200	1222	0.97
27	28	0.0052	0.41	11.5	0.8	1	23	1228	1251	1228	1251	0.94
28	28	3.3e-05	0.0026	18.4	3.2	2	23	1258	1280	1257	1280	0.95

Sequence Information

Coding Sequence: ATGTCACGACAAGTGGATGTAAAGGCCCTAGTATCGCACGTAGTTCGCGGTGACGGTGTTAATAGGTGCCGAATATGTATGGGGGATACTACAGAAGGACAAGTACACTTAAACGACACTGTTATAATGGACGGTGAAAGACCTGTAACGCTTTCCGAACTCCTGGAGACTGTTACTGGAATCCAGATGCAGCTGGACACAGACGGAGACCTGCCAGCCGGAGTGTGTCCAGAATGCTCGAAATGCGCTTTAAACGCTGCGGAATTCAGAACACTATGCCACCATGCAATCAGCCAGTGGGACTTAACTATTCAACTCTTACAAAACTTACCCGGGCAATGTAATGAAAAAATCAAAACAATGTTTGCCATCATAGACAAAAGCCAAATGACTATCATCAATGATGACATGTCTGATGATTCATTCGGCATAAATTCAGCTGCTCAAAGATTAACAGAACACATAAACCCACAAACGAATATCATAAAAAAAGATAATCATTTATCATTATGTAAATGTCCAAACTGCGGGAAAGAATTTCAGTATAGCCATCAATTAAGTCACCACTTAAAAGAATCAACGGATCTCAAACGTGCTTGCCATATTTGCTCAAAAATTATGTTACGTAATGATCTGGTCACGCACATGTTAGATGTTCATAAAAAGAATCCATATGATTGCAAAAAATGCCCTGCATTGCTGTATTCTCATAATCAATTTATTAGACATTTAACAAAGGCACACACTCGCGGTGCATGTACGTGTATTGAATGTGGACGGAATTTTCAATCATCGAATGCTTATCATGCACATGTTTCAGTACACAGACCGAAAAGTTGTCCGAGCTGTGATAAATTGTTCCGCAATCAAACTTGTTATGTTTACCATGTGAAAGAATGTTGCAATTTAGATAGAAACAGAGAAGACACTCATCACACAAAGAATAAAGTTACAGTAGACGTCAAGAATGAAAACAGCAAGAGAAACATAAAAGTAGGTCTCAGAGGGAGTGCGGCCAAGGAATGCATATGTGATCACTGCGGGAAGAAGTTTGCTGGGAAAAAGTTTGTCGCAGCACATATACAAATTGTTCACATGAAGAACACCCATCGCCCCTGTGTGTACTGCGGGAAGTTCCTAGCAGCAGCGCATATGACGCAGCATGTAAAAAAACATGAATCAGACCCATCGTACACATGTCAACATTGCAGTATAGTTCTCAAGACTCGTCTAGGATATATTCAACATTTACGCCTCCACACCGGAGAGAGACCGTACGCGTGCGATATTTGTGGTGAAACATTTTCAGCTTCTTCCAGACGGTCAGAACATATACGTAGAGTACATAAAAGCTCGGATATAATTTTGAAGCAAGCGTGTCATTTGTGTCCAGCAAAATTCCGGCTCCCTTATAGATTGAAAAAGCATTTAAAAGCAGTTCACAACGACGAAGGCGATGGGTCACAATCGCAGTTCGAATGTCAAGTCGAGGAGGAAATCGAACTACCCACGGGCCTGTGCTGCAACTGCACGAACAGCGCCATCTGTGGGTGGCAGTTCAAACAGCTATGTCTCGAATCGAACAAACATTGGAGAAAGACAACACTGTTGTTATCTAAAACGAAATTTCAGCCAACAAGCAAAGATAAAACATTGTACATCGGCTGCAATACTTTAATAAGAGATGATATTGAAAACAAACACCCAACGGATGCGATCGATAGACTAAACTCGCTCGTCGGTTCAAAGAAAAAAAAAACGAGATCTAAATATAAGAAAAAACATGTAGGTAACATTTATAAGTGTAAGGATTGTGGCAAAGATTTCACGGTTCCCTATTTCTTGAATCGTCATTTACTGAGTACGAAAAAACGCGCCTGCACCCTCTGCGGTAAGATTTTACCGAGAGAAAATTTGGCGAGACATTTGAATAAAGTTCACGCGAAGTTTGTGTTGAATTGCAATATCTGCGAGAAGTTATTCGATGATCAATTCGATTTGGAAAATCACCAGATAATATTACACGGAGATAGCTCGTATCAATGTAAGATCTGTAAGAATGGCTTTAAAAACGAGAGATCCCTCCGTGCCCACATGTACACGCACACCCTGTTCAATTGTTTATCGTGTAACGCTAGTTTTGAAAATAGAAAGTGTTACACGCATCACAGAAAACTCTGCGATGGTTCCAAGCACACGACAGAAGGTATATACGAATGCAATGATTGCGGCAATATATACACGAAGAAGCCTTCGTTAAAGGTTCACATCGTTCAGAAACATCTAAACGTTCTGCCGTATGTTTGTCAGATATGCGGAAAACGTAGTTCGACGAAAACTCATCACAAAGCCCATGAGCTCATCCACAAAACGGAAAGGAAAGTCTACCAATGTTTCTGTGGTGCGAAGATGCTCACAGAACTCGGTTTCAATATGCACCAGAGAATACATTCCGGCGAAAAGCCCTATGAATGTGGCGTATGTGGTGACAGGTTCCTGTCGGCCTCGAGGAGGTTGGATCACATCAAGAGACGACATAGGAGCAAGGAGATGGCGCACCGTTGTGATCAATGTGAGGCTAGGTTCGTTAGGCCGTTTGAACTGAAGAAACATTACAAATCTGCGCATTTGATGAGTCCGCAAGAAGAATATTTATTCCCAAAGGGTTTTTGTATATCTTGTACGAGTGTTGCGATTGCATCGTACGAGTTCAGAGTATTTGTACGAAAGTCAGAGAAACTGTGGACAAACTGTATAGAGTCGCTTCAAACGGTACCAACTTTGACGACGTCCCAGAAATCTATTTACGCGATCGTACGCGATAACTTATTAATCCATACCGTCAATAACTTCGAGGGTAACGCGAAGGATTTATTAGACCATCTCACGAATAGATTCGTAGCGAGGAAGATTTTAATAGAGAGGAAACCGAGGCACCCGAGACACCCCAGGGCCGGACCGTCGTGTAGCTGCACGGATTGTGGGAAAAGTTTTCTCAGTCCGTATTACTTGAATATGCATTTGCGTAATAGCGGTCAGAAAGAGGCCTGCTGGCTCTGTGGTGCGATGGTGATAAGAGGGAAAGAGATGCACGAACATATGGCAAAAATACATAAGACCGATATGTTCTTATGTACCGAATGTCCAATGCTCTTTAAAAGTGAGATGGAACGCAAGCGACACGTGAAGAAGTGTCACGGGCCAGGAGTATTGACGTGCGCTGATTGCGGTAGAACATTCCAGAGACCCGGATCGTTCGAAGTTCATTTACAAATGCACGCAGTCAGGACGTGCCGTGCTTGTGGCGCGCAGTTCGCGAATCGCGGCTGTTACAGGGAACACAGGTCGAAATGCGAACCGAACGCTAAACCGGACTTGAAAACGATACCGAGGAATAAAAGATCGAACATTCGAGATCCGGCAACGTTCACTTGTGACTATTGTAATAAAACGTACCATTCGCGTCCGCAGCTTAAGAACCATATACTATGGATACACATGGACATACGACCACATCAGTGTCAATGGTGCGGCAAGCGTTTTTACACTCCAGCGCGTTTAGCTGAACATTCGGTTGTGCACACGCGCGTCAGGAACTTCGAATGTGATATTTGTGGCGCGAAATTAGTATCCAAAATGGCCGCCGTGTACCACAGACGAAGGCATACGGGCGAAAGGCCGTACGAATGTCAGGATTGTGGTGAAAAGTTTATTTCGTCGTCACGGAGATCAGAACACGCGAAACGTAGACACAATAGAGGTGCTCGGCTCCAATGTACCGAGTGCCATGCGAGTTTTGTTAGGAATCATGAGTTAAAAAAACATATGGACAAAGTTCATAATCCAGATAATCACTTGATGGTTAAAATAAAAAAGGAAAAGTTTTTCCCAATCACGAAATCTGAAAAGCTTTAA
Protein Sequence: MSRQVDVKALVSHVVRGDGVNRCRICMGDTTEGQVHLNDTVIMDGERPVTLSELLETVTGIQMQLDTDGDLPAGVCPECSKCALNAAEFRTLCHHAISQWDLTIQLLQNLPGQCNEKIKTMFAIIDKSQMTIINDDMSDDSFGINSAAQRLTEHINPQTNIIKKDNHLSLCKCPNCGKEFQYSHQLSHHLKESTDLKRACHICSKIMLRNDLVTHMLDVHKKNPYDCKKCPALLYSHNQFIRHLTKAHTRGACTCIECGRNFQSSNAYHAHVSVHRPKSCPSCDKLFRNQTCYVYHVKECCNLDRNREDTHHTKNKVTVDVKNENSKRNIKVGLRGSAAKECICDHCGKKFAGKKFVAAHIQIVHMKNTHRPCVYCGKFLAAAHMTQHVKKHESDPSYTCQHCSIVLKTRLGYIQHLRLHTGERPYACDICGETFSASSRRSEHIRRVHKSSDIILKQACHLCPAKFRLPYRLKKHLKAVHNDEGDGSQSQFECQVEEEIELPTGLCCNCTNSAICGWQFKQLCLESNKHWRKTTLLLSKTKFQPTSKDKTLYIGCNTLIRDDIENKHPTDAIDRLNSLVGSKKKKTRSKYKKKHVGNIYKCKDCGKDFTVPYFLNRHLLSTKKRACTLCGKILPRENLARHLNKVHAKFVLNCNICEKLFDDQFDLENHQIILHGDSSYQCKICKNGFKNERSLRAHMYTHTLFNCLSCNASFENRKCYTHHRKLCDGSKHTTEGIYECNDCGNIYTKKPSLKVHIVQKHLNVLPYVCQICGKRSSTKTHHKAHELIHKTERKVYQCFCGAKMLTELGFNMHQRIHSGEKPYECGVCGDRFLSASRRLDHIKRRHRSKEMAHRCDQCEARFVRPFELKKHYKSAHLMSPQEEYLFPKGFCISCTSVAIASYEFRVFVRKSEKLWTNCIESLQTVPTLTTSQKSIYAIVRDNLLIHTVNNFEGNAKDLLDHLTNRFVARKILIERKPRHPRHPRAGPSCSCTDCGKSFLSPYYLNMHLRNSGQKEACWLCGAMVIRGKEMHEHMAKIHKTDMFLCTECPMLFKSEMERKRHVKKCHGPGVLTCADCGRTFQRPGSFEVHLQMHAVRTCRACGAQFANRGCYREHRSKCEPNAKPDLKTIPRNKRSNIRDPATFTCDYCNKTYHSRPQLKNHILWIHMDIRPHQCQWCGKRFYTPARLAEHSVVHTRVRNFECDICGAKLVSKMAAVYHRRRHTGERPYECQDCGEKFISSSRRSEHAKRRHNRGARLQCTECHASFVRNHELKKHMDKVHNPDNHLMVKIKKEKFFPITKSEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01508261;
90% Identity: iTF_01508261; iTF_01080912; iTF_01079248; iTF_01080088;
80% Identity: -