Tdic015715.1
Basic Information
- Insect
- Trypoxylus dichotomus
- Gene Symbol
- dmd-4
- Assembly
- GCA_014905495.1
- Location
- BNES01000066.1:6066608-6072787[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-25 3.5e-21 75.3 10.9 1 47 9 55 9 55 0.98 2 2 0.018 1.5e+02 2.8 0.9 29 35 231 237 229 244 0.87
Sequence Information
- Coding Sequence
- ATGCTGCAGAACAGCAGATCTGCCAGAGTACCAAAATGCGCGAGATGCCGAAACCATGGTATGATATCCACTCTTCGTGGACATAAAAAgcaatgtatttataaaaattgttcctGCACTAAGTGCGGCTTGATAAAAGAACGACAGAGAATAATGGCAGCTCAGGTTGCACTGAAACGTCAACAAGCAGCTGAAGATGCTATCGCACTTCATCTAGCTTCAGCAGAGAGCGGTACTACCTATGATTATCTACCACCGGGTCGTATTTACGGCATGCAAGTGACTTCACCAATGTCGGAGACATCGGAATGTGAATCGGAAAATTCAAAATCGGCGTCAGCTTCTGCCGAGGAGGTACAAGTTACTCCCGCCTCTATAGAAATGCTTTGCAAACTTTTCCCAAACAAGAAGCGGGCCGTATTGGAACTGGTTTTAAAGAGATGCAATCACGATCTTTTGAAGGCAATCGAGCATTTTAATTTATCGAATTCTAAGAAAAGTAATGCTGAGGAGAAGAAAACGGAAGGACATGTGTCGGCATTTAAACCCGTACATAGTAAGATTGCTGGGCATGCTGGTACAGTTCCTTTACTTACCGGGAGCAAGGTGTATATGCATAGTTTATAcccatttctttctttgtttaatACGCAGCCGGTTTTACCTAGTCCTGTATATGTTCCGGGATTTTGCGAATGTGAGCAATGCAAGTTTAATTTACATGCCAGCCAAAGGTCGTAA
- Protein Sequence
- MLQNSRSARVPKCARCRNHGMISTLRGHKKQCIYKNCSCTKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIYGMQVTSPMSETSECESENSKSASASAEEVQVTPASIEMLCKLFPNKKRAVLELVLKRCNHDLLKAIEHFNLSNSKKSNAEEKKTEGHVSAFKPVHSKIAGHAGTVPLLTGSKVYMHSLYPFLSLFNTQPVLPSPVYVPGFCECEQCKFNLHASQRS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627234; iTF_00068071; iTF_01252843; iTF_00956332; iTF_00626222; iTF_01120894; iTF_00434143; iTF_01123746; iTF_00307924; iTF_00740859; iTF_01258052; iTF_00466224; iTF_00464885;
- 90% Identity
- iTF_00307924;
- 80% Identity
- -