Basic Information

Gene Symbol
dmd-4
Assembly
GCA_031763485.1
Location
JARFOC010098362.1:8034-9547[-]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-25 2.6e-20 74.3 11.0 1 47 9 55 9 55 0.98
2 2 0.023 7e+02 2.5 1.1 29 35 232 238 230 242 0.86

Sequence Information

Coding Sequence
ATGCTACAGAACAACAGATCAGCCAGAATACCAAAATGTGCGAGGTGCAGAAATCACGGTATGATATCCACGCTGCGCGGGCACAAGAAACAATGCATCTACAAAAACTGTAATTGCACGAAATGTGGACTTATCAAAGAGAGGCAGAGGATTATGGCTGCTCAGGTAGCCCTCAAACGCCAGCAGGCAGCCGAAGACGCAATCGCCCTACATTTAGCGTCCGCAGAAAGCGGTACCACGTACGACTACCTGCCACCAGGTCGCATCTACGGTATGCAAGTCACATCGCCCATACCTCAGTCATCGGAAACAGAATCCGAAAACTCAAAATCCACCTCAACCTCAGCGGAAGACGTTCAAGTCACGCCGGCGTCCATAGACATGCTTTGCAAGTTATTTCCGAACAAGAAACGCGCCGTACTAGAATTGGTATTGAAAAGATGCAACCACGACCTCCTCAAGGCCATCGAACATTTCAACATGTCAAATACGAAAAAGAACGAGGTTGAAGAGAAGAAATCTGAGGACCATCACGTATCTGCTTTTAAACCCGTGCATAACAAGATGGCCGCTCATACCGGTGCAGTGCCCTTGCTGGCAGGAAGTAAGGTTTACATGCATAGTTTATATCCTTTTTTATCTCTGTTCAATACTCAACCAGTCTTACCTAGTCCGGTATATGTTCCTGGTTTTTGCGAATGCGAgcaatgtaaatttaatttgcacGGTGCTAGATCTTAA
Protein Sequence
MLQNNRSARIPKCARCRNHGMISTLRGHKKQCIYKNCNCTKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIYGMQVTSPIPQSSETESENSKSTSTSAEDVQVTPASIDMLCKLFPNKKRAVLELVLKRCNHDLLKAIEHFNMSNTKKNEVEEKKSEDHHVSAFKPVHNKMAAHTGAVPLLAGSKVYMHSLYPFLSLFNTQPVLPSPVYVPGFCECEQCKFNLHGARS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01498912;
90% Identity
iTF_00307924;
80% Identity
-