Gspi006502.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- dmd-4
- Assembly
- GCA_959613385.1
- Location
- OY390732.1:16378687-16384779[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-25 5.9e-21 75.1 10.9 1 47 27 73 27 73 0.98 2 2 0.023 2.1e+02 2.9 0.8 29 35 248 254 246 261 0.84
Sequence Information
- Coding Sequence
- ATGACTTCGATTTCGCCTGAGCAGATGGTGTCCGTAACTGCGAaGTTCAAGAAAGCGACGATGAACAGTCGTTCTGCAAGAGTTCCAAAATGCGCGCGATGCAGAAATCATGGAATGATATCAACGCTGAGGGGGCACAAGAAGCAATGTATCTATAAAAACTGCTCATGCACGAAGTGTGGACTCATCAAGGAAAGACAGCGCATCATGGCAGCGCAGGTGGCGCTGAAACGCCAGCAGGCTGCCGAAGACGCCATCGCCCTACATTTGGCCTCTGCCGAAAGCGGAACTACTTACGACTACCTCCCACCGGGCAGGATATACGGGATGCAGGTCACCTCGCCAAAATCAGACTCGCCCGAAATTGAACCAGTCAAAATCCAGCAGGAAGAAAACCACCAGGACGACGTTCAGGTCAGCCCTGCGTCGATTGACATGCTATGCAAGTTGTTCCCGAACAAGAAACGAGCGGTCCTGGAGCTGGTGCTGAAGCGATGCAACCACGATTTGCTGAAGGCCATCGAACATTTTAACATGTCGAAGCGAGGCGAGGACGAAGCGAAGCGGATCGAGGATCACGTTTCCGCGTTTAAGCCGGTACACGGGAAGATGGCCGCAGGACATCCGGCTTCTATACCGCTATTGGCCGGAAGCAAGGTGTACATGCACAGTTTATATCCGTTCCTGTCTCTTTTTAACCCGCAGCAGGTCTTGCCTAGTCCGGTATATGTTCCCGGATTTTGCGAATGCGAGCAGTGCAAGTATAATCTGCATAGTAGGATTGATCAAAGATCGTAA
- Protein Sequence
- MTSISPEQMVSVTAKFKKATMNSRSARVPKCARCRNHGMISTLRGHKKQCIYKNCSCTKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYDYLPPGRIYGMQVTSPKSDSPEIEPVKIQQEENHQDDVQVSPASIDMLCKLFPNKKRAVLELVLKRCNHDLLKAIEHFNMSKRGEDEAKRIEDHVSAFKPVHGKMAAGHPASIPLLAGSKVYMHSLYPFLSLFNPQQVLPSPVYVPGFCECEQCKYNLHSRIDQRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01498912;
- 90% Identity
- -
- 80% Identity
- -