Temo011102.2
Basic Information
- Insect
- Trisateles emortualis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947095525.1
- Location
- OX352733.1:19884845-19894987[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-67 1.1e-63 215.8 11.8 20 271 1 253 1 271 0.88 2 2 1.9 1.6e+04 -4.7 16.0 1 49 272 319 272 346 0.72
Sequence Information
- Coding Sequence
- ATGCGCGAATTGGAACGGCAGCAGCGGGAGCAGGAAGACCATGCGGACAAGGCATATGATATGTACTCAGGTACGCACGAGACGGTGGGTCGGCGGGACCGCTCGCGACTGGTGGCGCTCAGCCCGGCCACCGCCGTGCACTCGCCGCGACGCAGCTCTGAGGACTCCGTCGATGATTCTTTCAGCGTTAAAGACCTAAGGCATGAATTAAAAGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTCAAGGATAGGATAGAGGAATTGCACGAGGAATACGCGCAGCTTCAGCGGGAGCACAAGGAGAAATGTTCATCTTTCGAGCGTCTAAAGCGGGAGCACGAGTCAGTGTCGCGGGAGCTGTGCGCGGCGCGGGACGCGGTGCGTGCGCGGGACACGGCCGCGGCGGCCGCGGGGTTCGCCTTCGTGGAGGCGGCCGCGCTCGGCGCCGGCAGCGCGCCGCCCGGCGTGGGCGCCGCCGCCGGCTCCGTGCCGCCGCTCGCGCTCGTCTCGCACTCCGCCGAGCAGCTGCTCAACGATGCCGGGGAAGGCACGCTAGACGTGCGGTTGCAAAACTTGCTGAGTTCAAAACAATCCCTGGAATCAGAAGTTCGAAAGCTAAAGTTACAGTTGAACGAGGAGCGTGCCGCCAGACAGAATGGCGTCGCCAACCATCACGACCAGGAATATGAAAACGAATTAGAGACGGTGCGCAAGACCGCGGCGGACGCGAAGGGCCGCGCCGCTCGCGCCGAGGCCGAGGCCGCGCTGCACGCCGCGCACGTGGCGCGCCTCGAGGCGCAGCTCGCTCGCCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGGAGGAAGCTGCAGCGGGAGGCACGTGAAGCGTTGAATCGAGTGGAAGAACTGGAGACTGAAAACAGCCACCTGACGAAACGACTGGACAAACTGAAGAACGCCAAGTCGGCACTACTCAAGGACCTGTGA
- Protein Sequence
- MRELERQQREQEDHADKAYDMYSGTHETVGRRDRSRLVALSPATAVHSPRRSSEDSVDDSFSVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVSRELCAARDAVRARDTAAAAAGFAFVEAAALGAGSAPPGVGAAAGSVPPLALVSHSAEQLLNDAGEGTLDVRLQNLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELETVRKTAADAKGRAARAEAEAALHAAHVARLEAQLARLRARQDHQDEHEEQLKHERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00637671; iTF_00166935; iTF_00795725;
- 90% Identity
- iTF_00637671;
- 80% Identity
- -