Egri020948.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963662185.1
- Location
- OY759240.1:2952371-2966178[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-82 2e-77 261.9 22.2 1 298 7 297 7 298 0.93 2 2 0.9 4.5e+04 -5.2 15.5 1 48 295 341 295 369 0.72
Sequence Information
- Coding Sequence
- ATGTGTATTTGTTTACAGGCGGAACAGCGGTTGGCTGCACGCCGCGCTGCTCGGGCGGAGGCACGGGAGATCCGCATGCGCGAGCTGGAGCGACAGCAGAGAGAACAAGAGGACCATGCCGACAAGGCATACGATATGTATGGGGGAAAGACAGAGACAGTGGGGCGGCGCGACCGCACGAGACTGGCGGCGCTCAGCCCCGCCAGTTCGGTGCACTCACCGCGCCGCAGCTCTGAGGACTCGGTTGATGACACCTTCAGCATCAAGGACCTTAGACACGAGTTAAAGGAAGTTGAGGAGAAATTCCGAAAGGCGATGATTCTGAACGCGCAGTTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAACTGCTCAAGGACAGGATAGAGGAGCTCCACGAGGAATACGCGCAGTTACAGCGCGAGCACAGAGAGAAATGCTCGTCCTTGGAGCGCGTGAAGCGGGAACACGAGTCCGTGTCCCGGGAACTGAGCGCGGCGCGGGACGCGGTGCGGGCGCGGGActgcgcggcggcggcggcgggctTCGCCTTCGTGGAGGCGGCCGCGCTGGACGCCGCGCCGCCCGGCGTGGGCCCGGCCGTGGGCGCCGTGCCGCCGCTGGCGCTGGTGTCGCACCACGCCGAGCAGCTGCTCAACGACGCCGGGGAGGGACCGCTGGACGTGCGGTTGCAAAAGTTGCTGAGTTCGAAACAGTCCTTGGAGTCCGAAGTCCGTAAGCTGAAGTTGCAGTTGAACGAGGAACGCGCCGCCAGGCAGAACGGAGTGGCCAACCATCACGACCAGGAGTATGAGAACGAATTGGAGAGCGCGCGCAAGAGCCTGTCGGAGGCCAAGGGGCGCGCGGCGCGGGCCGAGGCGGAGGCGGCGCTGCACGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCCCGCCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGGCGCTCAAGCACGAGCGGCGCAAGCTGCAGCGCGAGGCGCGCGAAGCCCTAAACCGAGTAGAAGAATTGGAGACTGAGAACAGCCACCTGACGAAACGACTAGACAAACTCAAGAACGCTAAGTCCGCACTCTTAAAGGACCTGTGA
- Protein Sequence
- MCICLQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYGGKTETVGRRDRTRLAALSPASSVHSPRRSSEDSVDDTFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSLERVKREHESVSRELSAARDAVRARDCAAAAAGFAFVEAAALDAAPPGVGPAVGAVPPLALVSHHAEQLLNDAGEGPLDVRLQKLLSSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELESARKSLSEAKGRAARAEAEAALHAAHVARLEAQLARLRARQDHQDEHEEALKHERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491956;
- 90% Identity
- iTF_01491956;
- 80% Identity
- -