Acap017309.1
Basic Information
- Insect
- Asbolis capucinus
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_018249125.1
- Location
- DWJZ01016284.1:4022-7545[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-51 7.6e-47 160.7 10.2 90 268 2 185 1 204 0.88 2 2 2 2.9e+04 -5.8 20.0 1 46 205 249 205 278 0.71
Sequence Information
- Coding Sequence
- atgCATGAACTGAAGGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGCGTACCAGCTGGAGCTGCTCAAGGACCGGATAGAGGAGCTACACGAGGAGTACGCACAGCTGCAGCGGGAGCACAAAGAGAAGTGTTCGTCGCACGAGCGTCTGAAGCGCGAGCACGCAGCGCTGGAGCGCGAGCTGGCGGGCGCGCGGGACGCGGTGCGTGCGCGGGACGCGGCCGCTGCCGCTGCCGGCCGCGCGTTCGTGGAGGCCGCGTCGCTGGACGGCGGGGAAGGGGACGGGGTAGGGCAGGGCTTCGGCTCCGTGCCGCCGCTCGCGCTCGTCTCGCACTCCTCCGAGCAGCTGCTCAATGATGCTGGGGAGGGGACGCTAGACGTCCGGTTGCAGAAGTTGGTGAGCTCGAAGCAAGAGCTGGAATCAGAGGTGCGTAAGCTGAAGCTGCGGTTGAACGAGGAGCGCGCCGCTAGGCAGAACGGCGTCGCCACGCACCACGACCGCGACCACGAGACTGAGTTGGAGAGTCTCCGAAAGTCCGTATCAGAGGCGAAGGGTCGCGCGGCGCGGGCGGAGGCGGAGGCGGCGctggcggcggcgggcgcggcgcggCTGGAGGCGCAGCTGGCGCGGCTGCGGGCGCGGCAGGAGCACCAGGACGAGCGCGAGGAGCAGCTCAAGGTGGAGCGGCGGAAGCTTCAGCGGGAGGCGAGAGAAGCGCTTAACCGAGTGGAGGAGTTGGAAACGGAAAACAGTCATCTAACGAAGCGGCTCGACAAACTCAAGAACGCCAAGTCCGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MHELKEVEEKFRKAMILNAQLDNDKAALAYQLELLKDRIEELHEEYAQLQREHKEKCSSHERLKREHAALERELAGARDAVRARDAAAAAAGRAFVEAASLDGGEGDGVGQGFGSVPPLALVSHSSEQLLNDAGEGTLDVRLQKLVSSKQELESEVRKLKLRLNEERAARQNGVATHHDRDHETELESLRKSVSEAKGRAARAEAEAALAAAGAARLEAQLARLRARQEHQDEREEQLKVERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491956;
- 90% Identity
- iTF_00795725;
- 80% Identity
- -