Tver084721.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- ct
- Assembly
- GCA_958295665.1
- Location
- OY282559.1:146650375-146674709[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4e-27 6.3e-22 80.7 0.0 3 71 499 568 497 574 0.94 2 3 4.7e-32 4.6e-27 97.2 0.0 3 77 964 1039 962 1041 0.96 3 3 1.5e-30 1.5e-25 92.3 0.0 3 77 1202 1277 1200 1279 0.96
Sequence Information
- Coding Sequence
- ATGAGGCAACCTAATGTTCAGATCTCATCAGCGTTAACTAAAATTGGCAATGGAGAAAAATTGACGGAAGAAGAACTCCAACTTATTGAATCGCGTTTTCTTCCACAGGACGAAaTCTCAGCATTAGTTGAAGAAGTCTCACGATTACGAAGTGCAATAACAGCGCTCCAAGAATCCCATCAATCCCAATTAAAACGTTTAGAAGATCGGATTGATGCGAAACGACAACACATAACAAGACTTGAATCCCGAATAGATAACCAAAGCGAGTACGACGACGTTAAAAAGGAGAATAGTATTTTAAGATCGGTTGATTTTTCGTCACCACAATCGAGTGATACAAAACAATTTCAAGAGCTGCTGCTGGAACGTACAAAAGCACTTGCGGCCCAAACCGAGGCAATCAAATCATCGAGTTCAGATGGCACGTccacaacaaatacaacaactacaacaacaaccaaTCAAGATTGTCAACcccaacaacaacagcaacaacaaccagaacaacaacaacaacaatacgaacaaccaaaattgactatacaaaatataacttcAAATTCGCCATCACCCCAACCGATCGATATaccatcatcgtcatcatcatcatcgatcATAAATTGTGTAACACCATCGATTACACCAATCCCATTGCCCATTTTAACGGGTACAGCTAATGGTGAACCggccaaaattaatttaacccCACAATCAAAATTACTAAATCAAACTGGGCCGCCACCATCAAATAGTAGCGGCACCAGTggtaatttacaaaatgttgaacaatTTGGTTCGTTTTTGGGTGAGGAAATTGTTAGTAATTGGCGTCGTGAAATAACCCGTGAACGAAATAATTCGTACAATCATCATAATTTACGtttaaatcaatcaaacaacaataatattcataataatagTCATAACAGTAATAGTATTAACAACCATTTGAATTCACCTTTACTAGATGGTAACCACAGTTTAACGCATCCGGATAACGATAAATCGCGCAGTAGTCATCATGATGCATCGTCGCGTGCCTCGACCCCAATACATATGTCAAGTGGCCAGGATGGTCGTTTGAGTGGCATCAGCGAGGAGAATATGCATTTGAATGGTTTGACGGCGCTAAGTCAAATGTCCTTGAATCCACACCATCATCATTCACACCACCACCAATTACAACAGTAtcatcatcaattaaatcaacACCATCACCAGCAATTGCATCAAATGTCAAAAAGTCCAATCGATGATAATAATCAACACTCGAGTGGTGGACTGGGCGGACCATCGAATACGGGCGGCAATTTAATACCTGGCCTCCCATTTCAATTTCAAGAACGGGGACATTTTCGTTTTGCTGACGATTTACAAATGCCACCCGGTTCAATGGTGGGTCGACTTGGTGATTCGCTAATACCAAAGGGGGATCCAATGGAGGCACGGCTACAGGAAATGTTACGCTACAATATGGATAAGTATTCAAATCAAAGTTTGGATACGCTGCATATATCGCGAAGGGTACGCGAACTACTGTCTGTGCATAATATTGGGCAGCGATTATTTGCCAAATATGTATTAGGATTGTCGCAGGGTACGGTTTCGGAATTGTTGTCGAAACCAAAGCCATGGGATAAACTGACGGAGAAGGGGCGTGACAGCTATCGTAAAATGCATGCATGGGGATGCGATGATAATGCGGTCATGTTGCTGAAATCGTTGATACCGAAAAAGGATAAAATAGATTCAGGCATAACACAATATGGCGGACGACCAGAAAACGATATAACCGATGAAAGGATTCAGCATATATTAGGCGAGGCGGCCAACTTAATGAAAACCCCATCGAATAGTGGTGGCAGTATTAATTTACCAATGAATTCACAATCTCAACCACCAATACTACAACCAAATCTAATGCAGCAGACGACACAATCATCGGCTTCGACGACATCATCTAATTTATCGGCGGGTGGAAATAGTAGCGGTGGAAACGGCCTTAATTTACTGTCCCAAATGCCGCAGCAGCCGATAAAAACTGAAGAGATTATTAGTAATGATGAGGACTCAAAGTCACCGCCACCAAATCATTGTGATTCGCCGTTCTTCCCGTTGAGCGCCAAAGAGGCAATGCTACGCAATAAGATGAAAAAATACGATAATGATGATATATCGCACGAGAAAGTGACGCGTATTTATCAAGAGGAGTTGGCCAAATTGATGAGTCGAGCACCGCCAAAtctTTTGTTCCCCCATTTTTTCTCTGGTGCCGCAGCCGCTGTAACCAATCACAATCAAAACAGTAATGGCGGTAACAGTCAAAATAATATCCTGCCATCGACTTCACCGATGCCCGACGATAATATTCGACTGGCGCTGGAAGCATATCACCGTGAATTAGCTAAAATTCAAGCAGGCGGTGCTAATTTacctaattttccaaattttccaaatcTACCCGGATTATTGGCACTGCAGCAGCACGCTCTTAATGGGGCACAAGACTTATCACTAcccaaagaaaaacaaatgaaaatcaatGGTTCATCCCAATCAATGATGTCAATCGATTGTGAATCGAGTAAGGATATGGATGAATCACAATCGGGAAGACAATCAGGTTCAGCATTTAGTTTAGTGCGACCAAAAAATGAATCAACACCAACGACAACGGCATCGTCGGCACCAAGTCCAATCGGAAATTCAATCCTTCCGCCGGCCATAACGCCAACCGATGATTTAGCAGCTAGTCCCCTCCAAAGAATGGCATCAATCACAAATTCATTGATTACACAGCCACCGGTAACACCGCATCATTCAACGCCACAACGTCCATTAAAAGCGGTGTTGCCACCAATTACCCAGCAGCAATTCGATATGTTCAATAATCTGAATACCGAGGATATTGTGCGCCGTGTTAAAGAGGCCCTGTCACAGTATTCCATAAGTCAGCGACTTTTTGGTGAATCTGTGCTCGGTTTATCGCAGGGATCCGTCAGTGATTTACTCGCCCGTCCAAAGCCATGGCATATGCTTACGCAAAAAGGTCGCGAACCATTTATCCGCATGAAAATGTTCTTGGAAGATGATAATGCGGTACACAAATTGGTCGCTAGCCAATATAAAATTGCGCCCGAAAAGCTAATGCGAACCGGTAGCTATAGTGGCAGTCCGCAAATTCCATCCGCTATCTCCAAAGCAATGCCAATGATGCCAAAACTCATGGGCGAGCAGCTATCCAAAATGCAAGAGGAGCAACAGCATCGAATGTTACAACAATTGCAGCAAGGGTCTCCAATGGGGCCGCATATAACAACGTCCCAACCTCAGACAATGCTATTAACACCACCCGGGCTACCGCCGCATCATGCCATTGTACTCTCGTCCCAAGAGAAAGCCAAACAACAAGCCCAAGCAGCAGCAGCAGCGGCAGCAGCAGCCCAACAAGCACAGCAGCTTCAACAGCAGCAAGCCCAACAGGCAGCCCAACAAAATATGCCAATGCCAATTCACTCGCCGCAGCAACAATCAAACAATCCGATGCGAAATATGAACCAGCATATGTCGCCCACGGTCTATGAAATGGCCGCCCTAACACAAGACTTAGACACGCAAGTGatcacaacaaaaattaaagaggCTCTACTCGCAAATAATATTGGCCAAAAGaTATTCGGTGAGGCCGTGCTCGGACTATCCCAAGGATCCGTGTCTGAATTACTCTCCAAACCTAAACCGTGGCATATGTTGAGTATCAAAGGTCGAGAACCATTCATACGAATGCAGCTTTGGTTGGCCGACACCAACAATGTAGAACGACTACAAGTACTGAAAAATGAGAGACGTGAGGCTAATAAACGACGAAGATCTACAGGTCCGGGTGCACAGGATAATAGTTCGGACACAAGTAGTAATGATACATCGGAATTTTATCATTCAAATTCACCGGGACCAGCATCGGTTGGTTCGGCTTCAACTGGACCGCCGAATAAAAAACAACGGGTACTATTCTCCGAGGAACAAAAAGAGGCACTCCGACTCGCATTCCAGTTGGATCCGTACCCAAATGTAGCGACAATCGAATTTCTTGCCAATGAACTAGGATTATCGACCCGTACGATTACTAACTGGTTCCATAATCATCGTATGCGTTTGAAACAACAGGTACCGCATGGCCAGCCAAGTGAACCGGTACCGTCGAGAGATAGTGTTTCAGGCCATCCATTTGATCAAAATCAATTCCGTGCTTTGCTACATCAACGACTCATGGAACTGCAAAAGGAGCGGATGGGAATTAGTGGTGTACCACTACCGTATGCGCCCTATTTTGCAGCTAATCCAAATCTTGCGGCGCTTATACAGCGCGGCCTAATACCAGGCGGCGATGCAGCTAGTTTTGCAGCTTTAAATAATGCATTTAAACAGGAACAAATGAATGGACTTGACCTATCGGTTAAACGTGACGGTGACGATGATTTCGATGAAAATGATGACGAGGACAATGAAGATCACAGTCGTCTTTCGGATAATGAATCGATCGAAGATTCGATGGAACATTTAAAGAATGATCCTAGTAAAAATTTACCACCAACATCATCCACCTCCCTAGCCGCATCGATGGCACGAAGTTCGAGACGTAAACCGGCCGCACCACAATGGGTGAATCCGGTGTGGCAGGATGATAAAATATTGGCGAGTGGCGGTGGTACAAATACCGATGGCACTACTAATAAATCAAACGCCGACGAGGTAATAATTAATGGTGTGTGCATTATGCAACAGGCGGCCGATTTTAGTCGGCTCAGCGATCAAACGCTGCGTATTGAACCATCGTCGTTTAACGACGACggtgatgttgatgatgatgatgttcgTGATAAAACAGCACCAAttattaaaacggaaaaaatcacaacaaacgatcgtgacgatgatgatgattgtGATGAGgtggatgatgatgatgatgtagaGGCAAGCAATCTGAATACGGTAAACgatagtaataacaataataatgatagTAATGATGATAATaaatcgaataataataataacgctGAAAATTTAGTAGAtgagacaacaaaaaaaattaaaactgaactaAACGATACAACAGACGCGGATCGATGGGACTATTAA
- Protein Sequence
- MRQPNVQISSALTKIGNGEKLTEEELQLIESRFLPQDEISALVEEVSRLRSAITALQESHQSQLKRLEDRIDAKRQHITRLESRIDNQSEYDDVKKENSILRSVDFSSPQSSDTKQFQELLLERTKALAAQTEAIKSSSSDGTSTTNTTTTTTTNQDCQPQQQQQQQPEQQQQQYEQPKLTIQNITSNSPSPQPIDIPSSSSSSSIINCVTPSITPIPLPILTGTANGEPAKINLTPQSKLLNQTGPPPSNSSGTSGNLQNVEQFGSFLGEEIVSNWRREITRERNNSYNHHNLRLNQSNNNNIHNNSHNSNSINNHLNSPLLDGNHSLTHPDNDKSRSSHHDASSRASTPIHMSSGQDGRLSGISEENMHLNGLTALSQMSLNPHHHHSHHHQLQQYHHQLNQHHHQQLHQMSKSPIDDNNQHSSGGLGGPSNTGGNLIPGLPFQFQERGHFRFADDLQMPPGSMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYSNQSLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDKIDSGITQYGGRPENDITDERIQHILGEAANLMKTPSNSGGSINLPMNSQSQPPILQPNLMQQTTQSSASTTSSNLSAGGNSSGGNGLNLLSQMPQQPIKTEEIISNDEDSKSPPPNHCDSPFFPLSAKEAMLRNKMKKYDNDDISHEKVTRIYQEELAKLMSRAPPNLLFPHFFSGAAAAVTNHNQNSNGGNSQNNILPSTSPMPDDNIRLALEAYHRELAKIQAGGANLPNFPNFPNLPGLLALQQHALNGAQDLSLPKEKQMKINGSSQSMMSIDCESSKDMDESQSGRQSGSAFSLVRPKNESTPTTTASSAPSPIGNSILPPAITPTDDLAASPLQRMASITNSLITQPPVTPHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPSAISKAMPMMPKLMGEQLSKMQEEQQHRMLQQLQQGSPMGPHITTSQPQTMLLTPPGLPPHHAIVLSSQEKAKQQAQAAAAAAAAAQQAQQLQQQQAQQAAQQNMPMPIHSPQQQSNNPMRNMNQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTNNVERLQVLKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPASVGSASTGPPNKKQRVLFSEEQKEALRLAFQLDPYPNVATIEFLANELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPVPSRDSVSGHPFDQNQFRALLHQRLMELQKERMGISGVPLPYAPYFAANPNLAALIQRGLIPGGDAASFAALNNAFKQEQMNGLDLSVKRDGDDDFDENDDEDNEDHSRLSDNESIEDSMEHLKNDPSKNLPPTSSTSLAASMARSSRRKPAAPQWVNPVWQDDKILASGGGTNTDGTTNKSNADEVIINGVCIMQQAADFSRLSDQTLRIEPSSFNDDGDVDDDDVRDKTAPIIKTEKITTNDRDDDDDCDEVDDDDDVEASNLNTVNDSNNNNNDSNDDNKSNNNNNAENLVDETTKKIKTELNDTTDADRWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01459342; iTF_01457125; iTF_01457224; iTF_01455538; iTF_01455457; iTF_01458132; iTF_01458224; iTF_01454742; iTF_01454654; iTF_01052971; iTF_01053042; iTF_01054187; iTF_01054109; iTF_01051797; iTF_01051715;
- 90% Identity
- iTF_01459342; iTF_01455457; iTF_01455538; iTF_01457224; iTF_01457125; iTF_01458224; iTF_01458132; iTF_01053042; iTF_01052971; iTF_01051797; iTF_01051715; iTF_01454742; iTF_01454654; iTF_01054109; iTF_01054187;
- 80% Identity
- iTF_01459342;