Tcon027527.1
Basic Information
- Insect
- Tipula confusa
- Gene Symbol
- ct
- Assembly
- GCA_963556175.1
- Location
- OY744476.1:196569021-196640394[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.6e-27 1.8e-22 80.5 0.0 3 71 770 839 768 845 0.94 2 3 5.6e-32 1.3e-27 96.9 0.0 3 77 1236 1311 1234 1313 0.96 3 3 1.8e-30 4.2e-26 92.1 0.0 3 77 1472 1547 1470 1549 0.96
Sequence Information
- Coding Sequence
- ATGCAACCCACGTTACCACAAAGTAATGCGGGCGCCGCGGATATGGATCTACCGGCTGCACAATCAATGGATTGGTTATTTCGTAAGGAACGTATTTATTTGCTAGCCCAATTTTGGCAACAGcgaGCAACACTTGCCGAAAAAGAAGTGAACACATTAAAAGAACAATTATCGAATACTTCGATCACGTCACCAAATTcaacaacatcaacatcatCACTATCACCAAATACAACATCGGCGGCTCATGCTGCAGCTGCGGCTACAGCATCActcctaaataaattaaatatatcacaAACACAACAGAATGGTATACCAAATTCACCGCCATTATCAATGACATCGTCGGTCGATTTAATGAATCCGGTAACAAATCATAgtaaattattgaataataacaatattaatagtgtaaataataataataataataacaataatagtaaatcaaatgaattattaGACAAATCTGAAACAAAAGAGAAttcaaattgtaataataataatattagtaatttGGATGATGAGGATGAAGACGACGATATTgatgaagaaattttaaaaataaattcatctaaaatggatacaaatagtaatagtagtagtaataataataataataataaatcaataaaaaataataatagtagtagtaaaatcaataatcatcatctaaataatgatgatgataatgataacaataataatggtgataataataatatattagatgatgaagatgatgataatgatggtaataaattaaatagttcgACATTATCGTCGCGATCATCAACACCGGcgcatcaacaacaaaataatgataaagaaaatagtgatagtaataatataaatagtagtagtagtaataataataataattttaataataatataaatagtattagtACAAGGACGTTAGCGGAAGAATTGGCTGCCAAAGATAAAGAGATATCGACACTAGTTGAAGAAGTCTCACGATTACGAAGTGCAATAACAGCGCTCCAAGAATCCCATCAATCCCAATTGAAACGTTTAGAAGATCGGATTGACGCGAAACGACAACACATAACAAGACTTGAATCCCGAATAGATAACCAAAGTGAGTACGACgatgttaaaaaagaaaatagtattttaagaTCGGTCGACTTTTCGTCGCCACAATCGAGTGATACAAAACAATTTCAAGAATTACTGCTGGAACGTACCAAAGCCCTTGCCGCCCAAACTGAGGCAATAAAATCATCGAATTCTGATGgcACTTCCACAACTaatacaacaactacaacaaccaATCAAGATTGTCAACTTCAACttcttcaacaacaacaacaaaacgagcaacaacaatcaaaattgactgtgaaaaatttaacgtccaattCACCGTCACCCCAACCAATCGAtataccatcatcatcatcatcgtcatcaattATAAATTGTGTAACCCCATCGATTACACCCGTACCATTGCCCATTTTAATTGGTGGCAGTGGTTGTGAATCggccaaaattaatttaacccCACCATCGAAATTACTGAATCAAACCCCGCCAAATACGAATAGTAATAATggcaatttacaaaatgttgaaCAATTTGGATCGTTTTTGGGCGAGGAGATTGTTAGTAATTGGCGTCGTGAAATAACTCGTGAACGTAATAATTCATACAATCATCATAATTTAcgtttaaatcaatcaattaataataataataatagtaataataataacaataatagtaataacgaCCATTTGAATTCACCTTTACTAGATGGTAACCATAGTTTAACGCATCAGGATAACGATAAATCGCGTAGTAGTCATCACGATGCATCATCGCGTGCTTCAACACCAATACTTATGTCGGGCGGTGGTCAAGATGGTCGTTTGAGCGGCATCAGTGAGGAGAATATgcatttaaatggtttaacGGCTTTAAGTCAAATGTCCTTAAaccatcaccatcatcattCACACCACCACCAATTACAACAATATCACCATCAGCTAAATCAACACCACCACCAGCAATTACATCAAATGTCGAAAAGTCCAAGCGATGATAATCAACAGTCGGGCGGATTAGGCGGTCCATCGAATACGGGTGGTAGTTTAATACCGGGTCTACCATTTCAATTCCAAGAACGTGGACATTTTCGTTTTGCCGATGATTTACAAATGCCACCCGGTTCAATGGTCGGCCGTCTCGGCGACTCGTTAATACCAAAAGGTGATCCGATGGAAGCTCGCCTACAAGAAATGTTACGTTACAATATGGACAAGTATTCAAATCAAAGTTTGGATACGTTACATATATCGCGACGGGTTCGTGAACTATTGTCTGTTCATAATATTGGACAGCGACTATTTGCCAAATATGTATTAGGATTGTCGCAGGGTACCGTTTCGGAACTATTGTCGAAACCAAAACCATGGGATAAACTAACCGAAAAGGGACGTGATAGTTATCGTAAAATGCATGCATGGGGATGTGATGATAATGCGGTTATGTTATTAAAATCGTTGATACCTAAAAAAGATAAATTAGATTCGGGCATAACACAATATGGTGGACGTCCAGAAAATGATATAACCGATGAACGAATTCAACATATATTGGGAGAGGCGGCCAACTTGATGAAAACACCATCAAATAGTAGTGGCATTAATTTGCCAATGAATTCACAATCACAGCCACCGTTACTTCAATCAAACAATATACAGACGACACAATCGTTGGCGTCGACAACATCATCGAATTTATCGGCGGGTAGTGGCAATGGGCTAAATGTCTTATCGCATTTACCACAACAATCAATCAAAACCGAGGATATGATAAGTAATGATGAGGATTCAAAATCACCGCCACCAAATCATTGTGATTCACCGTTCTTTCCGTCGAGTTCGAAGGATTCGATGCGCAACAAGGTGAAAAAATACGATAACGATGATATATCACATGAAAAAGTAACGCGTATTTATCAAGAAGAGTTGGCCAAATTAATGAGTCGGGCCCCGCCAAAtattttgttCCCGCATTTTTTCAGTGGTGGAGCAGCAGCCGCCGCGGCTGCCGCAGCAGCAGCAGTATCCAACAATAGTCAAAACAGTAATGGTGGTAATAGTCAAAATAATATTCTTCAGTCGACATCACCGATGCCTGACGATAATATTCGTATGGCATTGGAAGCATATCACCGTGAATTAGCTAAAATTCAAGCCGGTGGTGCTAATCTACcgaattttcctaattttccaAATCTACCCGGACTATTGGCTCTACAGCAACATGCTCTTAATGGGGCGCAAGATTTATCACTAcccaaagaaaaacaaatgaaactcAATGGTTCATCCCAATCAATGATGTCGATCGATTGTGATTTGAGTAAGGATATGGATGAATCGCAATCTGGACGACAATCAGGTTCAGCTTTTAGTTTAGTGCGACCAAAAAATGAATCAACACCAACGACAACAGCTTCGTCGGCGCCAAGTCCGATCGGAAATTCAATCCTTCCGCCGGCCATAACGCCAACCGACGATATGGCAGCTAGTCCCCTCCAAAGAATGGCATCAATAACAAATTCGTTGATCACCCAACCACCGGTAACGCCGCATCATTCGACACCACAACGACCATTAAAAGCGGTACTACCACCAATTACCCAGCAACAATTCGATATGTTCAATAATCTTAATACCGAGGATATTGTGCGTCGCGTTAAAGAAGCCCTGTCACAGTATTCAATTAGTCAACGGCTATTTGGTGAATCTGTACTTGGTTTATCACAAGGATCCGTTAGTGATTTACTTGCCCGTCCAAAGCCATGGCATATGCTTACACAAAAAGGCCGTGAACCATTCATCCGCATGAAAATGTTCTTGGAGGATGACAATGCGGTACATAAATTGGTAGCCAGTCAATATAAAATTGCACCCGAAAAGCTTATGCGAACCGGCAGCTATAGTGGCAGTCCACAAATTCCCTCTGCTATTTCAAAAGCAATGCCAATGATGCCAAAACTTATGGGTGAACAGCTTTCAAAAATGCAAGaggaacaacaacaacgaatGTTACATCAGCTACAGCAACAAGGCCCTCCGATGGTGCCGCATATACCAACGTCACTACCTCAAACAATGCTGCTAACGCCACCTGGACTACCACCTCATCATGCCATTGCACTCTCGTCACACGAGAAGGCTAAGCAACAAGCGCAAGCAGCAGCCGCGGCAGCAGCACAAGCCCAGCAACTTCAACAGCAGCAAGCCCAACAAGCAGCACAACAAAATATGCCAATGCCGATCCACTCGCCACAGCAGCAATCAAATAATCCGATGCGTAACATGAATCAACACATGTCACCTACTGTTTATGAAATGGCCGCACTAACACAAGACTTAGACACACAAGTGATTACAACTAAAATTAAAGAGGCTCTACTTGCCAATAATATTGGTCAAAAGATATTCGGTGAAGCAGTCTTGGGGTTATCTCAGGGTTCGGTATCAGAATTACTATCAAAACCTAAACCTTGGCATATGCTAAGCATAAAAGGCCGAGAACCATTCATTCGAATGCAGCTTTGGTTAGCTGACACCAACAATGTCGAACGACTACAAGTACTGAAAAATGAGAGACGTGAGGCTAATAAACGACGAAGATCTACAGGTCCAGGTGCTCAAGATAATAGTTCGGACACAAGTAGTAATGATACATCAGAATTTTATCATTCGAACTCACCGGGTCCAGCATCGGTCGGTTCCGCTTCTACTGGTCctccaaataaaaaacaacggGTATTATTCTCGGAAGAACAAAAAGAAGCGCTTCGACTGGCATTCCAATTGGATCCGTATCCAAATGTTGCGACAATCGAATTTCTTGCCAATGAACTAGGACTATCGACCCGCACGATTACCAACTGGTTCCACAATCATCGTATGCGACTGAAACAACAAGTACCGCATGGCCAACCGAGTGAACCGGTGCCGTCGAGAGATAGTGTTTCTGGCCACCCGTTCGACCAGAATCAATTCCGTGCGTTGCTACATCAACGACTCATGGAATTACAAAAAGAACGATTAGGAATTAGTGGTGTACCACTACCCTATGCCCCCTACTTTGCAGCTAATCCAAATCTTGCCGCCCTTATTCAACGCGGCTTAATCCCTGGTGGCGATGCAGCTAGTTTTGCAGCTTTAAATAATGCATTTAAACAGGAACAAATGAATGGACTCGATTTATCGGTGAAACGTGACGGTGACGATGATTTCGATGAAAATGACGATGAAGATAATGAGGATCATAGTCGACTTTCCGACAATGAATCGATCGAAGATTCAatggaacatttaaaaaatgatacgAGTAAAAATTTGACACCAATATCGGCCGCATCCCTAACCGCATCGATGGTACGAAGTTCGAGGCGTAAACCGGTCGCCCCGCAATGGGTTAATCCCGATTGGCAGGATGATAAAATAGTAGCGGGTAGTGCAACAAATATCGATGGCAAcacaaataaaccaaaatccGATGAGGTTATAATTAATGGGGTATGCGTTATGCAACAAGCAGCCGACTTTAGTCGTCTCAACGATCATACGCTACGTATCGAGCCGTCATCTTTCAACGACAACGATCCGAATGATGGTCATAATAAATCGGCACCAAttataaaaaccgaaaaaattacGACCAACGACGATGATTGCGATGAGCTGAACgatgacgacgacgacgacgacgatgatAATGATATTGAGGCAAACGATTTAACTAACGTAAacgatagtaataataataaaaataatgatagtaaTGATGATGTGAATAAATcaaatagtaacaataataatgaaagTTTAGTAGATgagacaacaaaaacaattaaaactgaACTAAACGATACAACAGACGCGGATCGATGGGACTATTAA
- Protein Sequence
- MQPTLPQSNAGAADMDLPAAQSMDWLFRKERIYLLAQFWQQRATLAEKEVNTLKEQLSNTSITSPNSTTSTSSLSPNTTSAAHAAAAATASLLNKLNISQTQQNGIPNSPPLSMTSSVDLMNPVTNHSKLLNNNNINSVNNNNNNNNNSKSNELLDKSETKENSNCNNNNISNLDDEDEDDDIDEEILKINSSKMDTNSNSSSNNNNNNKSIKNNNSSSKINNHHLNNDDDNDNNNNGDNNNILDDEDDDNDGNKLNSSTLSSRSSTPAHQQQNNDKENSDSNNINSSSSNNNNNFNNNINSISTRTLAEELAAKDKEISTLVEEVSRLRSAITALQESHQSQLKRLEDRIDAKRQHITRLESRIDNQSEYDDVKKENSILRSVDFSSPQSSDTKQFQELLLERTKALAAQTEAIKSSNSDGTSTTNTTTTTTNQDCQLQLLQQQQQNEQQQSKLTVKNLTSNSPSPQPIDIPSSSSSSSIINCVTPSITPVPLPILIGGSGCESAKINLTPPSKLLNQTPPNTNSNNGNLQNVEQFGSFLGEEIVSNWRREITRERNNSYNHHNLRLNQSINNNNNSNNNNNNSNNDHLNSPLLDGNHSLTHQDNDKSRSSHHDASSRASTPILMSGGGQDGRLSGISEENMHLNGLTALSQMSLNHHHHHSHHHQLQQYHHQLNQHHHQQLHQMSKSPSDDNQQSGGLGGPSNTGGSLIPGLPFQFQERGHFRFADDLQMPPGSMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYSNQSLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDKLDSGITQYGGRPENDITDERIQHILGEAANLMKTPSNSSGINLPMNSQSQPPLLQSNNIQTTQSLASTTSSNLSAGSGNGLNVLSHLPQQSIKTEDMISNDEDSKSPPPNHCDSPFFPSSSKDSMRNKVKKYDNDDISHEKVTRIYQEELAKLMSRAPPNILFPHFFSGGAAAAAAAAAAAVSNNSQNSNGGNSQNNILQSTSPMPDDNIRMALEAYHRELAKIQAGGANLPNFPNFPNLPGLLALQQHALNGAQDLSLPKEKQMKLNGSSQSMMSIDCDLSKDMDESQSGRQSGSAFSLVRPKNESTPTTTASSAPSPIGNSILPPAITPTDDMAASPLQRMASITNSLITQPPVTPHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPSAISKAMPMMPKLMGEQLSKMQEEQQQRMLHQLQQQGPPMVPHIPTSLPQTMLLTPPGLPPHHAIALSSHEKAKQQAQAAAAAAAQAQQLQQQQAQQAAQQNMPMPIHSPQQQSNNPMRNMNQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTNNVERLQVLKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPASVGSASTGPPNKKQRVLFSEEQKEALRLAFQLDPYPNVATIEFLANELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPVPSRDSVSGHPFDQNQFRALLHQRLMELQKERLGISGVPLPYAPYFAANPNLAALIQRGLIPGGDAASFAALNNAFKQEQMNGLDLSVKRDGDDDFDENDDEDNEDHSRLSDNESIEDSMEHLKNDTSKNLTPISAASLTASMVRSSRRKPVAPQWVNPDWQDDKIVAGSATNIDGNTNKPKSDEVIINGVCVMQQAADFSRLNDHTLRIEPSSFNDNDPNDGHNKSAPIIKTEKITTNDDDCDELNDDDDDDDDDNDIEANDLTNVNDSNNNKNNDSNDDVNKSNSNNNNESLVDETTKTIKTELNDTTDADRWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01459265;
- 90% Identity
- iTF_01459265;
- 80% Identity
- iTF_01454742;