Basic Information

Insect: Tipula unca
Gene Symbol: ct
Assembly: GCA_951394425.1
Location: OX596380.1:20529775-20600439[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.7e-27 1.9e-22 80.4 0.0 3 71 779 848 777 854 0.94

2 3 5.7e-32 1.4e-27 96.9 0.0 3 77 1258 1333 1256 1335 0.96

3 3 1.8e-30 4.6e-26 92.1 0.0 3 77 1494 1569 1492 1571 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.7e-27	1.9e-22	80.4	3	71	779	848	777	854	0.94
2	3	5.7e-32	1.4e-27	96.9	3	77	1258	1333	1256	1335	0.96
3	3	1.8e-30	4.6e-26	92.1	3	77	1494	1569	1492	1571	0.96

Sequence Information

Coding Sequence: ATGCAACCCACGTTACCACAAAGTAATGCGGGCGCCTCGGATATGGATCTACCGGCTGCACAATCAATGGATTGGTTATTTCGTAAGGAACGTATTTATTTGCTAGCCCAATTTTGGCAACAGagaGCAACACTTGCCGAAAAAGAAGTGAACACACTAAAAGAACAACTGTCGAATACATCGATCACGTCGCCAAATTCAACAACATCAACATCATCACTATCACCAAATACAACATCGGCAGCTCATGCGGCGGCCGCGGCTGCTGCAACActgctaaataaattaaatttatcacaaaccCAACAGAATGGTATACCAAATTCACCGCCACTATCAATGACATCGTCGGTCGATTTAATGAATccattaacaacaaataatagtaaattattgaataacaacaatagtaatagtgtaaataataataataacaataatagtaaatcaaatgaattattagacaaatctgaaataaaagaGAATTCAAATTGCAATATCCGCGGTAGTTTGGATGTGGAGGACGAGGACGACGACGACGAAATTGatgaagaaatttcaaaaatcaattcatCTAAAATGGATACAAAtagtaatagtagtagtaataataataataaatcaataaaaaataataataatagtagtaaaatCAATAATCATCATCtgaataatgatgatgatgatgataatgataacaataataatggtgataataataatatattagatGATGACGATGACGATTATGatggtaataaattaaatagttcgaCATTATCGTCGCGATCATCGACACCGGCgcatcaacaacaaaataatgataaagaaaatagtgatagtaataatataaatagtagtagtggtaataataataatagtaatttaaataataatagtagtaatagtaTTAGTACAAGGACGTTAGCGGAAGAATTGGCTGCCAAAGATAAAGAGATATCAACATTAATTGAAGAAGTCTCCCGATTACGAAGTGCAATAACAGCGCTCCAAGAATCCCATCAATCCCAATTAAAACGTTTAGAAGATCGGATCGATGCGAAACGGCAACACATAACAAGACTTGAATCCCGAATAGATAACCAAAGCGAATACGATGATGTTAAAAAAGAGAATAGTATTTTAAGATCGGTGGACTTCTCGTCGCCGCAATCGAGCGATACGAAGCAATTTCAAGAATTACTGCTGGAGCGGACAAAAGCGCTTGCGGCCCAAACTGAGGCAATTAAATCATCGAATTCAGATGgCACGTCCACAaccaatacaacaacaacaacaacaactaatcAAGATTGTCAACcccaactacaacaacaacaacagcaactaCAAATTCATCAACCAAAAttgatcataaaaaatttaacttcaaaTTCGCCATCACCCCAACCGATCGATATaccatcatcgtcatcatcttCATCGATCATAAATTGTGTAACACCATCGATTACACCAGTCCCATTGCCCATTTTAATTGGGGCCGCTAGTGACCCTATACCAccagcaaaaattaatttaaccccACAATCAAAATTACTAAATCAGAGTGCCGCGCCACAACAGAGCACCGGTACGggtaatttacaaaatgttgaacAATTTGGCTCGTTTTTGGGCGAGGAGATTGTTAGTAATTGGCGTCGTGAAATAACTCGCGAACGAAATAATTCATACAATCATCATAATTTACGTTTAAATCAATCAAaccatattaataataacaataatactcataataatagtaataacaataatagtaataacgaCCATTTGAATTCACCTTTACTAGATGGTAACCATAGTTTAACGCATCCGGATAACGATAAATCGCGTAGTAGTCACCATGATGCATCATCGCGTGCCTCGACTCCGATACTTATGTCGAGCGTTGGTCAGGACGGTCGTTTGAGCGGTGTCAGCGAGGAGAATATGCATTTGAATGGTTTAACGGCCCTGAGTCAAATGTCCCTAAaccatcaccatcatcattcGCACCACCACCAATTGCAACAGTATCACCATCAATTGAATCAGCACCATCACCAGCAATTGCATCAAATGTCAAAAAGTCCAATCGATGATAATCAACAGTCGAGCGGTTTAGGTGGACCATCGAATACGGGCGGCAGTTTAATACCCGGCCTACCATTTCAATTCCAAGATCGTGGTCATTTTCGGTTTGCCGATGATTTGCAAATGCCACCCGGCTCAATGGTCGGTCGACTTGGCGATTCGCTGATACCAAAAGGTGATCCAATGGAGGCGCGACTACAAGAAATGCTACGCTACAACATGGATAAGTATTCGAATCAAAGTTTGGATACGCTGCATATATCACGACGGGTTCGTGAACTATTATCTGTCCATAATATTGGTCAGCGACTATTTGCCAAATATGTATTAGGATTATCGCAGGGTACCGTTTCGGAATTACTATCGAAACCAAAGCCATGGGATAAATTAACGGAGAAGGGACGTGACAGTTATCGCAAAATGCATGCATGGGGATGTGATGATAATGCGGTCATGTTGTTAAAATCGTTGATACCGAAAAAGGATAAAATAGATTCGGGCATAACACAATACGGTGGACGGCCAGAAAACGATATAACCGATGAACGGATTCAGCATATATTGGGAGAGGCGGCAAACTTAATGAAAACACCATCAAATAGTGGTGGTATTAATTTGCCAATGAATTCACAATCCCAGCCACCGATACTacaaccaaataataataatcttaatatCCAGGCGACACTATCGTCGGCGTCGACAACATCGTCGAATTTATCGGCGGGaggcggtggtggtggtggtggtggtagtGGTGGGAACGGTCTGAATGTACTGTCCCAAATGACACAGCAGCCGATTAAAACCGAAGATATGATTAGTAATGATGAGGATTCAAAATCACCGCCACCAAATCATTGTGATTCGCCGTTCTTCCCGTCGAGTTCCAAAGATTCGATGCTGCGCAACAAGGTGAAAAAATACGATAATGATGATATATCACAGGAAAAAGTGACGCGTATTTATCACGAGGAATTGGCTAAACTGATGAGCCGTGCACCGCCAAATCTTTTGTTCCCGCATTTTTTCACCGGTGGGGCAGCTGCGGCCGCGGCTGCCGCAGCAGCTGTGTCGAACCACAACCAAAACAGTAACGGCGGCAATAGTCAAAATAATATACTGCCCTCCACATCGCCGATGCCCGACGAAAATATTCGATTGGCATTGGAGGCGTATCACCGTGAATTAGCTAAAATTCAAGCTGGCGGTGCTAATCTAcctaattttccaaatttccctAATCTACCTGGATTATTGGCACTCCAGCAGCACGCCCTTAATGGAGCACAAGACTTATCACTACCcaaagaaaaacaaatgaaaatcaatGGCTCGTCCCAATCAATGATGTCCATCGATTGTGACTCGAGTAAAGACATGGATGAATCGCAATCGGGAAGACAATCGGGTTCAGCATTTAGTTTAGTGCGACCTAAAAATGAATCGACACCAACGACAACCGCATCGTCGGCGCCAAGCCCGATCGGAAATTCAATCCTTCCGCCAGCTATAACGCCAACTGATGATTTAGCAGCTAGTCCCCTCCAAAGAATGGCATCAATAACAAATTCATTGATTACACAGCCGCCCGTAACACCGCATCATTCAACACCGCAACGTCCATTAAAAGCGGTGTTGCCACCAATCACCCAACAACAATTCGATATGTTCAATAATCTCAATACGGAGGATATCGTGCGCCGCGTCAAAGAAGCCCTGTCACAGTACTCAATTAGCCAGCGACTTTTTGGTGAATCTGTGCTCGGTTTGTCGCAGGGATCTGTCAGTGATTTACTCGCCCGTCCAAAGCCATGGCATATGCTTACGCAAAAAGGCCGTGAACCATTCATCCGCATGAAAATGTTCTTGGAGGATGACAATGCGGTACACAAATTGGTCGCCagtcaatataaaattgcaCCCGAAAAGCTAATGCGAACCGGTAGCTATAGTGGCAGCCCACAAATTCCTTCCGCCATTTCAAAAGCCATGCCAATGATGCCAAAGCTAATGGGCGAGCAGCTTTCGAAAATGCAAGAGGAACAACAGCATCGGATGTTACAACAATTACAGCAAGTGTCTCCGATGGCACCGCACATACCAACGTCACAACCTCAAACAATGCTACTAACGCCGCCCGGGCTACCGCCCCATCATGCCATAGTACTCTCGTCACAAGAGAAAGCCAAACAGCAAGCCCAAGCAGCGGCAGCAGCAGCTCAACAAGCCCAGCAGCTTCAACAGCAACAGGCAGCCCAACAAGCAGCGCAACAGAATATGCCAATGCCAATTCACTCACCGCAGCAACAATCGAATAATCCAATGCGAAACATGAGCCAGCACATGTCGCCCACGGTTTATGAGATGGCGGCCCTAACACAAGACTTAGACACACAAGTGATCACTACTAAAATTAAAGAGGCTCTACTCGCCAATAATATTGGCCAAAAGATATTCGGCGAGGCGGTGCTCGGACTATCCCAAGGCTCGGTGTCTGAATTACTGTCAAAACCTAAACCTTGGCATATGTTGAGTATAAAAGGTCGGGAACCATTCATTCGAATGCAGCTATGGTTGGCCGACACCAACAATGTAGAACGACTACAAGTACTGAAAAATGAGAGACGTGAGGCTAATAAACGACGAAGATCTACAGGTCCGGGTGCACAGGATAACAGTTCGGATACAAGCAGTAATGATACATCCGAATTTTATCATTCAAATTCACCGGGACCCGCATCGGTTGGTTCGGCTTCAACTGGGCCGCCCAATAAAAAACAACGGGTTCTATTCTCCGAGGAACAAAAGGAAGCGCTTCGACTGGCTTTCCAATTGGATCCGTACCCAAATGTTGCAACAATCGAATTTCTTGCCAATGAACTAGGACTATCGACCCGTACGATCACCAACTGGTTCCATAATCATCGTATGCGATTGAAACAACAAGTTCCGCATGGCCAGCCAAGTGAACCAGTTCCGTCGAGGGACAGTGTTTCCGGCCATCCGTTCGATCAAAATCAGTTCCGAGCGTTACTACATCAACGGCTCATGGAATTGCAGAAGGAGCGGATGGGAATTAGTGGTGTGCCACTACCGTACGCCCCCTATTTCGCAGCTAATCCAAACCTTGCCGCCCTCATACAGCGCGGTCTAATCCCAGGCGGCGACGCAGCTAGTTTCGCAGCTTTAAATAATGCCTTCAAACAGGAACAAATGAATGGGCTCGATTTATCGGTGAAACGTGACGGTGACGATGATTTCGACGAGAACGATGACGAAGAAAATGAGGATCACAGTCGACTCTCCGATAACGAATCGATCGAAGATTCCATGGAACATTTAAAGAATGATACGACAAGTAAAAATTTGCCACCAACATCAACGTCTGCATCCGCGTTAACCGCCTCGATGGTGCGAAGCTCAAGACGTAAACCGGCCGCACCGCAGTGGGTGAATCCGGTTTGGCAGGATGATAAATTGGCAGCGGCTGGGGCGGCGGCCACAAACACAGATGGCAGCGCAATTAAATCAAAACCGGATGAAGTTATAATTAATGGGGTGTGCGTTATGCAGCAGGCGGCCGATTTTAGTCGCCTCAACGATCATACGCTCCGTATAGAGCCATCGTCTGCGTTTaacgatgatgacgatgatgataatGTTCGTGACAAATCGGTGCCAATCATAAAAACCGAAAATATCACCACAAACGATCGGAACGATGACGGTGATGGGCtgaacgatgatgatgatgatgatgacgttCAGGCAAACGATTTAACTAATGTGAACGacagtaataataacaataataatgatagtaatgatgataataaatcgaataataacaataacaataatgataGTTTAGTAGATGAgacagcaaaaaaaattaaaaccgaacTAAACGATACAACAGACGCGGATCGATGGGactattaa
Protein Sequence: MQPTLPQSNAGASDMDLPAAQSMDWLFRKERIYLLAQFWQQRATLAEKEVNTLKEQLSNTSITSPNSTTSTSSLSPNTTSAAHAAAAAAATLLNKLNLSQTQQNGIPNSPPLSMTSSVDLMNPLTTNNSKLLNNNNSNSVNNNNNNNSKSNELLDKSEIKENSNCNIRGSLDVEDEDDDDEIDEEISKINSSKMDTNSNSSSNNNNKSIKNNNNSSKINNHHLNNDDDDDNDNNNNGDNNNILDDDDDDYDGNKLNSSTLSSRSSTPAHQQQNNDKENSDSNNINSSSGNNNNSNLNNNSSNSISTRTLAEELAAKDKEISTLIEEVSRLRSAITALQESHQSQLKRLEDRIDAKRQHITRLESRIDNQSEYDDVKKENSILRSVDFSSPQSSDTKQFQELLLERTKALAAQTEAIKSSNSDGTSTTNTTTTTTTNQDCQPQLQQQQQQLQIHQPKLIIKNLTSNSPSPQPIDIPSSSSSSSIINCVTPSITPVPLPILIGAASDPIPPAKINLTPQSKLLNQSAAPQQSTGTGNLQNVEQFGSFLGEEIVSNWRREITRERNNSYNHHNLRLNQSNHINNNNNTHNNSNNNNSNNDHLNSPLLDGNHSLTHPDNDKSRSSHHDASSRASTPILMSSVGQDGRLSGVSEENMHLNGLTALSQMSLNHHHHHSHHHQLQQYHHQLNQHHHQQLHQMSKSPIDDNQQSSGLGGPSNTGGSLIPGLPFQFQDRGHFRFADDLQMPPGSMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYSNQSLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDKIDSGITQYGGRPENDITDERIQHILGEAANLMKTPSNSGGINLPMNSQSQPPILQPNNNNLNIQATLSSASTTSSNLSAGGGGGGGGGSGGNGLNVLSQMTQQPIKTEDMISNDEDSKSPPPNHCDSPFFPSSSKDSMLRNKVKKYDNDDISQEKVTRIYHEELAKLMSRAPPNLLFPHFFTGGAAAAAAAAAAVSNHNQNSNGGNSQNNILPSTSPMPDENIRLALEAYHRELAKIQAGGANLPNFPNFPNLPGLLALQQHALNGAQDLSLPKEKQMKINGSSQSMMSIDCDSSKDMDESQSGRQSGSAFSLVRPKNESTPTTTASSAPSPIGNSILPPAITPTDDLAASPLQRMASITNSLITQPPVTPHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPSAISKAMPMMPKLMGEQLSKMQEEQQHRMLQQLQQVSPMAPHIPTSQPQTMLLTPPGLPPHHAIVLSSQEKAKQQAQAAAAAAQQAQQLQQQQAAQQAAQQNMPMPIHSPQQQSNNPMRNMSQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTNNVERLQVLKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPASVGSASTGPPNKKQRVLFSEEQKEALRLAFQLDPYPNVATIEFLANELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPVPSRDSVSGHPFDQNQFRALLHQRLMELQKERMGISGVPLPYAPYFAANPNLAALIQRGLIPGGDAASFAALNNAFKQEQMNGLDLSVKRDGDDDFDENDDEENEDHSRLSDNESIEDSMEHLKNDTTSKNLPPTSTSASALTASMVRSSRRKPAAPQWVNPVWQDDKLAAAGAAATNTDGSAIKSKPDEVIINGVCVMQQAADFSRLNDHTLRIEPSSAFNDDDDDDNVRDKSVPIIKTENITTNDRNDDGDGLNDDDDDDDVQANDLTNVNDSNNNNNNDSNDDNKSNNNNNNNDSLVDETAKKIKTELNDTTDADRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01459265;
90% Identity: iTF_01459265;
80% Identity: iTF_01458224;