Thel039398.1
Basic Information
- Insect
- Tipula helvola
- Gene Symbol
- ct
- Assembly
- GCA_963556165.1
- Location
- OY744481.1:331844485-331869428[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.2e-27 4.3e-22 80.8 0.0 3 71 473 542 471 548 0.94 2 3 4.5e-32 3.1e-27 97.2 0.0 3 77 937 1012 935 1014 0.96 3 3 1.5e-30 1e-25 92.4 0.0 3 77 1149 1224 1147 1226 0.96
Sequence Information
- Coding Sequence
- ATGCGAAGGCATCTTTTTGATaTCTCAACATTAATTGAAGAAGTCTCACGATTACGAAGTGCAATAACAGCGCTCCAAGAATCCCATCAATCCCAATTAAAACGTTTAGAAGATCGGATTGATGCGAAACGAGAACACATAACAAGACTTGAATCCCGAATAGATAACCAAAGCCAGTACGACGACGTTAAAAAGGAGAATAGTATTTTAAGTTCGGTTGATTTTTCGTCACCACAATCGAGTGatacaaaacaatttcaagAGCTGCTGCTGGAACGTACAAAAGCACTTGCGGCCCAAACCGAGGCAATCAAATCATCGAGTTCAGATGGCACGTCcacaacaaatacaacaactacaacaacaaccaaTCAAGATTGTCAaccccaacaacaacaacaacaaccagaacaacaacaacaacaatacgaACAACCAAAATTGACTATAGAAAATCTAACTTCAAATTCGCCATCACCCCAACCGATCGATATAccatcatcgtcatcatcatcatcgatcATAAATTGTGTAACACCATCGATTACACCAGTCCCATTGCCCATTTTAACGGGTACAGCAAATGGTGAActggcaaaaattaatttaactccACAATCAAAATTACTAAATCAAACTGGGCCGCCACCACCATCATCAAATAGTACCGGCGGCGGTGGCACCAGTagtaatttacaaaatgttgaacaatttggttcgtttttggGTGAAGAGATTGTTAGTAATTGGCGTCGTGAAATAACCCGTGAACGAAATAATTCGTACAATCATcataatttacgtttaaatcaatcaaacaacaataatataattcataataataGTCATAACAGTAATAGTATTAACAACCATTTGAATTCACCTTTACTAGATGGTAACCACAGTTTAACGCATCCGGATAATGATAAATCGCGCAGTAGTCATCATGATGCATCGTCACGTGCATCGACCCCAATACATATGTCGAGCGGGCAGGACGGTCGTTTGAGTGGCATCAGTGAGGAGAATATGCATTTGAATGGTTTGACGGCGTTAAGTCAAATGTCCTTGAATCCACACCATCATCATTCACACCACCATCAATTACAACAGTATCATCATCAATTAAATCAACATCATCACCAGCAATTGCATCAAATGTCAAAAAGTCCGATCGATGATAATAATCAACATTCGGGTGGTGGACTTGGCGGACCATCGAATACGGGTGGCAGTTTAATACCTGGCCTACCATTTCAATTTCAAGAGCGAGGACATTTTCGGTTCGCGGACGATTTACAAATGCCACCCGGTTCTATGGTGGGTCGACTTGGTGATTCGCTAATACCAAAGGGGGATCCAATGGAGGCACGACTACAAGAAATGTTACGCTACAATATGgataaatattcaaatcaaaGTTTGGATACGCTGCATATATCGCGTAGGGTACGCGAACTGCTGTCTGTACATAATATTGGGCAGCGACTATTTGCCAAATATGTATTAGGTTTGTCACAGGGTACGGTTTCGGAATTGTTGTCGAAACCAAAGCCATGGGATAAATTGACGGAGAAGGGGCGTGATAGTTATCGTAAAATGCATGCATGGGGATGCGATGATAATGCGGTTATGTTGCTGAAATCGTTGATACCGAAAAAGGATAAAATAGATTCGGGCATAACACAATTTGGTGGACGACCCGAAAATGATATAACCGATGAAAGGATTCAGCATATATTAGGCGAGGCGGCCAACTTAATGAAAACTCCATCGAATAGTGGTGGCAGTATTAATTTACCAATGAATTCACAATCCCAGCCACCGATACTACAACCAAATCTAATGCAGACAACACAATCATCGACTTCGACGACATCATCTAATTTATCAGCGGGTGGAAATAGTAGCGGTGGAAACTGCCTTACTTTACTGTCCCAAATGCCGCAGCAGCCGATAAAAACTGAAGAGATTATTAGTAATGATGAGGATTCAAAGTCACCGCCACCAAATCATTGTGATTCACCGTTTTTCCCGTTGAGCGCAAAAGAGGCAATGCTACGCAATAAGATGAAAAAATACGATAATGATGATATATCGCACGAGAAAGTGACACGTATTTATCAAGAGGAGTTGGCCAAGTTGATGAGTCGAGCACCGCCAAAtctTTTATTTCCACATTTTTTCTCTGGTGCCGCAGCCGCTGTAACCAATCACAATCAAAACAGTAATGGCGGCaacagtcaaaataatatccTGCCATCAACTTCACCGATGCCCGACGATAATATACGGCTGGCGTTGGAAGCATATCACCGTGAATTAGCTAAAATTCAAGCAGGCGGTGCTAATTTaccgaattttccaaattttccaaatctgCCCGGATTATTGGCACTGCAGCAGCACGCCCTTAATGGGGCACAAGACTTATCACTACccaaagaaaaacaaatgaaaatcaatgGTTCATCCCAATCAATGATGTCAATCGATTGTGAATCGAGTAAAGATATGGATGAATCACAATCGGGAAGACAATCGGGTTCAGCATTTAGTTTAGTGCGACCAAAAAATGAATCAACACCAACGACAACAGCATCGTCGGCACCAAGTCCAATCGGAAATTCAATCCTTCCGCCGGCCATAACGCCAACTGATGATTTAGCAGCTAGTCCCCTCCAAAGAATGGCATCAATCACAAATTCATTAATTACACAGCCACCGGTAACACCGCATCATTCAACGCCACAACGTCCATTAAAAGCGGTATTGCCACCAATTACCCAGCAGCAATTCGATATGTTCAATAATCTCAATACCGAGGATATTGTGCGCCGTGTTAAAGAGGCCCTGTCACAGTATTCGATAAGCCAGCGACTTTTTGGTGAATCTGTGCTCGGTTTATCGCAAGGATCCGTCAGTGATTTACTCGCCCGTCCAAAGCCTTGGCATATGCTTACGCAAAAAGGTCGCGAACCATTTATCcgcatgaaaatgtttttggagGATGATAATGCGGTGCACAAATTAGTTGCTAGCCAATATAAAATTGCACCCGAAAAGCTAATGCGAACCGGTAGCTATAGTGGCAGCCCGCAAATTCCATCCGCTATTTCCAAAGCAATGCCAATGATGCCAAAACTCATGGGCGAGCAGCTATCCAAAATGCAAGAGGAGCAACAGCATCGAATGTTACAACAATTGCAGCATGGGTCTCCAATGGGGCCGCATATACCAACGTCTCAACCTCAGACAATGCTATTGACACCACCTGGGCTACCACCGCATCATGCCATTCAACTTCAACAGCAGCAAGCCCAACAGGCAGCCCAACAAAATATGCCAATGCCAATTCACTCGCCGCAGCAACAATCAAATAATCCGATGCGAAATATGAACCAGCATATGTCGCCCACGGTTTATGAAATGGCCGCCCTAACACAAGACTTAGACACACAAGTGATCACAACTAAAATTAAAGAGGCTCTACTCGCAAATAATATTGGCCAAAAGATATTCGGTGAGGCCGTACTCGGACTATCCCAAGGATCTGTGTCTGAATTACTCTCCAAGCCTAAACCGTGGCATATGTTGAGTATCAAAGGTCGAGAACCATTCATTCGAATGCAGCTTTGGTTGGCCGACACCAACAATGTAGAACGACTACAAGTACTGAAAAATGAGAGACGCGAGGCTAATAAACGACGAAGATCAACAGGTCCGGGTGCACAGGATAACAGTTCGGACACAAGCAGTAATGATACATCGGAATTTTATCATTCAAATTCACCGGGACCCGCATCGGTTGGTTCGGCTTCAACTGGACcgccaaataaaaaacaacgggTACTATTCTCCGAGGAACAAAAAGAAGCACTCCGGCTGGCATTCCAGTTGGACCCGTACCCAAATGTAGCGACAATCGAATTTCTTGCCAATGAACTAGGATTATCGACCCGTACGATTACAAACTGGTTCCATAATCATCGTATGCGTTTGAAACAACAGGTACCGCATGGCCAGCCGAGTGAACCGGTACCATCGAGAGATAGTGTTTCAGGTCATCCATTCGATCAAAATCAATTCCGTGCGCTGCTACACCAACGGCTCATGGAATTGCAAAAGGAGCGGATGGGAATTAGCGGTGTACCACTACCGTATGCACCCTATTTTGCCGCCAATCCAAATCTTGCTGCGCTTATACAACGCGGCCTAATACCAGGCGGCGATGCTGCTAGTTTTGCAGCTTTAAATAATGCATTTAAACAGGAACAAATGAATGGACTTGACCTATCGGTTAAacgtgatggtgatgatgatttCGATGAAAATGACGACGAGGACAATGAAGATCACAATCGCCTATCGGATAATGAATCGATCGAAGATTCGatggaacatttaaaaaatgatccTAGTAAAAATTTACCACCAACATCGTCCACCTCCTTAGCTGCATCGATGGCACGAAGTTCGAGACGTAAACCGGCCGCACCACAGTGGGTGAATCCGGTGTGGCAGGATGACAAAATATTGGCTAGCGCCGGTGGCACAAATATCGAGGGCaccacaaataaatcaaatgccGACGAGGTAATAATCAATGGTGTATGCGTTATGCAGCAGGCAGCCGATTTTAGTAGGCTCAGCGATCAAACGCTTCGTATTGAGCCATCTTCATTTAACGATGACggtaatgatgatgatgatgatgttcgTGATAAGACGGCACCAATTATTAAAAcggaaaaaattataacaaacgATCGTggtgacgatgatgatgattgtGATGAGGtggacgatgatgatgatgtggaGGCAAGCAATCTGAATACCGTAAACGatagtaataacaataataatgatagtaatgatgataataaatcgaataataataatagcgcGGAAAATTTAGTAGAtgagacaacaaaaaaaattaaaactgaactAAACGATACAACAGACGCGGATCGATGGGACtattaa
- Protein Sequence
- MRRHLFDISTLIEEVSRLRSAITALQESHQSQLKRLEDRIDAKREHITRLESRIDNQSQYDDVKKENSILSSVDFSSPQSSDTKQFQELLLERTKALAAQTEAIKSSSSDGTSTTNTTTTTTTNQDCQPQQQQQQPEQQQQQYEQPKLTIENLTSNSPSPQPIDIPSSSSSSSIINCVTPSITPVPLPILTGTANGELAKINLTPQSKLLNQTGPPPPSSNSTGGGGTSSNLQNVEQFGSFLGEEIVSNWRREITRERNNSYNHHNLRLNQSNNNNIIHNNSHNSNSINNHLNSPLLDGNHSLTHPDNDKSRSSHHDASSRASTPIHMSSGQDGRLSGISEENMHLNGLTALSQMSLNPHHHHSHHHQLQQYHHQLNQHHHQQLHQMSKSPIDDNNQHSGGGLGGPSNTGGSLIPGLPFQFQERGHFRFADDLQMPPGSMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYSNQSLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDKIDSGITQFGGRPENDITDERIQHILGEAANLMKTPSNSGGSINLPMNSQSQPPILQPNLMQTTQSSTSTTSSNLSAGGNSSGGNCLTLLSQMPQQPIKTEEIISNDEDSKSPPPNHCDSPFFPLSAKEAMLRNKMKKYDNDDISHEKVTRIYQEELAKLMSRAPPNLLFPHFFSGAAAAVTNHNQNSNGGNSQNNILPSTSPMPDDNIRLALEAYHRELAKIQAGGANLPNFPNFPNLPGLLALQQHALNGAQDLSLPKEKQMKINGSSQSMMSIDCESSKDMDESQSGRQSGSAFSLVRPKNESTPTTTASSAPSPIGNSILPPAITPTDDLAASPLQRMASITNSLITQPPVTPHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPSAISKAMPMMPKLMGEQLSKMQEEQQHRMLQQLQHGSPMGPHIPTSQPQTMLLTPPGLPPHHAIQLQQQQAQQAAQQNMPMPIHSPQQQSNNPMRNMNQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTNNVERLQVLKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPASVGSASTGPPNKKQRVLFSEEQKEALRLAFQLDPYPNVATIEFLANELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPVPSRDSVSGHPFDQNQFRALLHQRLMELQKERMGISGVPLPYAPYFAANPNLAALIQRGLIPGGDAASFAALNNAFKQEQMNGLDLSVKRDGDDDFDENDDEDNEDHNRLSDNESIEDSMEHLKNDPSKNLPPTSSTSLAASMARSSRRKPAAPQWVNPVWQDDKILASAGGTNIEGTTNKSNADEVIINGVCVMQQAADFSRLSDQTLRIEPSSFNDDGNDDDDDVRDKTAPIIKTEKIITNDRGDDDDDCDEVDDDDDVEASNLNTVNDSNNNNNDSNDDNKSNNNNSAENLVDETTKKIKTELNDTTDADRWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01459265;
- 90% Identity
- iTF_01459265;
- 80% Identity
- iTF_01455538;