Basic Information

Insect: Tipula lateralis
Gene Symbol: ct
Assembly: GCA_963932295.1
Location: OZ010737.1:184063054-184117724[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.6e-27 1.5e-22 80.5 0.0 3 71 757 826 755 832 0.94

2 3 5.5e-32 1.1e-27 96.9 0.0 3 77 1224 1299 1222 1301 0.96

3 3 1.8e-30 3.5e-26 92.1 0.0 3 77 1462 1537 1460 1539 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.6e-27	1.5e-22	80.5	3	71	757	826	755	832	0.94
2	3	5.5e-32	1.1e-27	96.9	3	77	1224	1299	1222	1301	0.96
3	3	1.8e-30	3.5e-26	92.1	3	77	1462	1537	1460	1539	0.96

Sequence Information

Coding Sequence: ATGCAACCCACGTTACCACAAAGTAATGCGGGCGCCGCGGATATGGATCTACCGGCAGCACAATCAATGGATTGGTTATTTCGTAAGGAACGTATTTATTTGCTAGCCCAATTTTGGCAACAGCGAGCAACACTGGCCGAAAAGGAAGTGAACACACTTAAAGAACAGCTATCGAATACATCGATCACGTCGTCAAATTCAACAACATCAACATCATCACTATCACCAAATACAACATCGGCAGCGCATGCTGCGGCCGCGGCTGCAGCATCACtgctaaataaattgaatttatcgcAAACACAACAGAATGGTATACCAAATTCGCCACCATTATCAATGACATCGTCGGTCGATCTAATGAATCCGTTAACaaataatagtaaattattgaataataacaatagtaatagtgtaaataataaaaataataatagtaaatcaAATGAATTATTAGACAAATCTGAAATGAAGGagaattcaaattataataatattttggatGAAGAGGACGACGAAATTGATgaagaaatttcaaaaatcaattcATCTAAAATGGATACACTTAgtaatagtagtagtaataataataataaatcaataaaaaataataataataatagtagtaaaaTCAATAATCATCATCTAAATAAcgatgatgataatgataacaataataataatggtgataataataatatattagatgatgacgatgacgatgatgttgctaataaattaaatagttcgACATTATCGTCGCGATCATCGACACCGGCgcatcaacaacaaaataatgataaagaaaatagtgatagtaataatataaatagtagtaataataataatagtaatttaaataataatagtaatagtattaGTACAAGGACGTTAGCGGAAGAATTGGCTGCCAAAGATAAAGAGATATCAGCATTAGTTGAGGAAGTCTCACGATTACGAAGTGCAATAACAGCGCTCCAAGAATCGCATCAATCCCAATTGAAACGTTTAGAAGATCGGATCGATGCGAAACGACAACATATAACAAGACTTGAATCTCGAATAGATAACCAAAGTGAATACGACGATGTTAAAAAGGAGAATAGTATTTTAAGATCGGTCGATTTTTCGTCACCACAATCGAGTGATACCAAACAATTTCAAGAACTACTGCTGGAACGTACAAAAGCACTTGCAGCTCAAACCGAGGCAATTAAATCATCAAATTCTGATGGCACGTccacaacaaatacaacaacCACAACAGCCAATCAAGATTGTCAACCTCTACAACAGTCACAACAAAGCCAACAGCCAAAATTGattgtgaaaaatttaactTCAAATTCACCATCACCCCAACCGATCGATATACCATCATCGTCGTCATCTTCGTCGATCATTAATTGTGTAACGCCATCGATTACACCGGTCCCGTTGCCAATTTTAACTGGATCATCTAGTGAGCCagccaaaattaatttaacaccaCAATCAAAATTACTGAATCAAACCGCCCCACCGAGTACAGGTACAACTGGTAATTTACAAAATGTTGAACAGTTTGGCTCGTTTTTGGGCGAAGAAATCGTTAGTAATTGGCGTCGTGAAATAACCCGCGAACGAAATAATTCGTACAATCATCATAATTTACgtttaaatcaatcaaataataataacattattaataataataataatagtaataacaataatagtaataacgaCCATTTGAATTCACCTTTATTAGATGGTAACCATAGTCTAACACATCCGGATAACGATAAATCGCGTAGTAGTCATCATGATGCATCATCGCGCGCCTCGACACCCATACTCATGTCGGGCGGTCAGGATGGTCGTTTGAGTGGTATCAGCGAAGAGAATATGCATTTGAATGGTTTAACGGCCCTTAGTCAAATGTCCCTaaatcatcaccatcatcattcGCACCATCATCAATTGCAACAATATCACCATCAATTGAATCAACATCATCACCAGCAATTGcatcaaatgtcaaaaagtcCAAGCGACGATAATCAACAATCGAGTGGACTAGGTGGACCATCGAATACTGGTGGCAATTTAATGCCCGGCCTACCGTTTCAATTCCAAGATCGTGGACATTTTCGCTTTGCCGACGATTTACAAATGCCGCCCGGTTCGATGGTCGGCCGACTTGGCGACTCGCTAATACCAAAAGGTGATCCGATGGAGGCACGACTACAAGAAATGCTACGCTACAATATGGATAAGTATTCGAATCAAAGTTTGGATACGCTGCATATATCGCGACGGGTTCGGGAACTATTGTCTGTTCATAATATTGGGCAGCGTCTATTTGCCAAATATGTATTAGGATTGTCGCAGGGTACCGTTTCGGAATTGCTATCGAAACCGAAGCCATGGGACAAATTGACGGAAAAGGGACGTGATAGCTATCGTAAAATGCACGCATGGGGATGTGATGATAATGCTGTTATGTTGCTGAAATCGTTGATACCGAAAAAGGATAAATTAGATTCGAGCATAACACAATATGGTGGTCGACCGGAAAACGATATAACCGATGAACGTATTCAGCATATATTGGGCGAAGCGGCCAATTTGATGAAAACCCCATCGAATAGTGGCGGTATTAATTTGCCAATGAATTCACAATCGCAACCACCAATTCTACAACCAAATAATATCCAAACAACACAATCATCGGCCTCGACAACATCGTCGAATATATCGGCTGGCGGTGGAAATGGGCTAAATGTAATGTCCCAGCTAGTACCGCAACAATCGATCAAAACGGAAGATATGATTAGTAATGATGAGGATTCAAAATCACCACCACCAAATCATTGTGATTCGCCGTTCTTTCCGTCGAGTTCGAAGGACTCGATGCTACGCAATAAGGTGAAAAAGTACGACAATGATGATATATCGCACGAAAAAGTGACTCGCATTTATCAAGAAGAGTTGGCGAAATTGATGAGCCGAGCACCGCCAAAtatATTGTTCCCGCATTTTTTTACTGGTGGAGCAGCGGCGGCCGCAGCAGCAGCGGCAGCTGTGTCAAACAACAGCCAAAACTCTAATGGCGGTAATACTCAAAATAATATCCTGCCATCAACATCGCCGATGCCCGATGACAATATTCGATTGGCATTGGAAGCATATCACCGTGAGCTAGCAAAAATTCAAGCCGGTGGTGCAAATCTAccaaattttcccaattttccAAATCTACCTGGACTATTGGCACTGCAGCAGCATGCCCTAAACGGGGCACAAGACTTATCACTacccaaagaaaaacaaatgaaaatcaacGGTTCATCCCAATCAATGATGTCGATCGATTGTGAATCGAGTAAAGATATGGATGAATCACAGTCGGGACGACAATCGGGTTCGGCATTTAGTTTAGTGCGACCAAAAAATGAATCGACACCAACGACAACCGCATCGTCGGCCCCAAGTCCGATCGGAAATTCAATCCTTCCGCCGGCCATTACACCAACCGATGATTTAGCAGCTAGTCCCCTCCAAAGAATGGCATCAATAACAAATTCTTTAATAACACAGCCACCAGTAACACCACATCATTCGACGCCGCAACGTCCATTAAAAGCGGTATTGCCACCAATCACACAGCAGCAATTCGATATGTTCAATAATCTAAATACCGAAGATATTGTGCGCCGCGTTAAAGAAGCTTTATCACAGTATTCAATCAGCCAGCGACTATTTGGTGAATCTGTGCTCGGTTTGTCACAAGGATCCGTCAGCGATTTACTTGCCCGTCCAAAGCCATGGCATATGCTTACACAAAAGGGTCGCGAACCATTCATTCGCATGAAAATGTTTTTGGAGGATGATAATGCTGTACACAAATTGGTCGCCAgccaatataaaattgcacccgAAAAGCTAATGCGAACAGGTAGCTACAGTGGTAGCCCTCAAATTCCATCCGCAATATCAAAAGCAATGCCTATGATGCCAAAACTTATGGGCGAGCAACTATCGAAAATGCAAGAGGAACAACAGCATCGAATGTTGCAACAGTTACAGCAAGTGTCACCAATGGCGCCGCACATACCAACGTCCCAACCTCAAACAATGTTGCTAACACCACCCGGACTCCCACCACATCATGCAATTTCTTTATCGTCCCAAGAGAAAGCCAAACAGCAAGCCCAGGctgcagcagcagcagcagcagtgGCACAACAAGCCCAGCAGCTTCAACAACAGCAGGCGCAACATGCGGCACAACAAAATATGCCAATGCCAATTCACTCGCCgcaacaacaatcaaataatccGATGCGGAACATGAACCAGCATATGTCGCCCACAGTTTATGAAATGGCAGCCCTAACACAAGACTTAGATACGCAAGTGATCACAACTAAAATTAAAGAGGCTCTACTCGCCAATAATATTGGACAAAAGATATTCGGTGAGGCGGTACTCGGCTTATCGCAAGGTTCAGTTTCTGAATTACTTTCGAAACCTAAACCATGGCATATGTTGAGTATAAAAGGTCGGGAACCATTCATTCGAATGCAGCTATGGTTGGCCGACACAAACAATGTAGAACGACTACAAGTACTGAAAAACGAGAGACGGGAGGCTAATAAGCGACGAAGATCAACAGGTCCGGGCGCACAAGATAACAGTTCTGACACCAGTAGTAATGATACATCAGAATTTTATCATTCGAATTCACCGGGACCAGCTTCGGTTGGTTCAGCTTCAACTGGACCACCGAATAAAAAACAACGAGTATTATTCTCCGAAGAACAAAAGGAAGCACTCCGACTGGCATTCCAATTGGATCCATATCCAAATGTTGCGACAATCGAATTTCTTGCCAACGAACTAGGACTATCGACCCGTACGATTACAAACTGGTTCCATAATCATCGTATGAGATTGAAACAACAAGTACCACATGGTCAGCCGAGTGAACCTGTGCCGTCGAGAGATAGTGTTTCGGGCCAACCATTCGATCAAAATCAATTCCGTGCATTACTACATCAACGACTAATGGAATTACAAAAGGAGCGAATGGGAATAAGTGGAGTACCGCTACCATACGCACCCTACTTTGCAGCTAATCCAAATCTTGCAGCACTTATACAGCGCGGCCTAATACCAGGCGGCGATGCAGCTAGTTTCGCAGCTTTAAACAATGCATTTAAACAGGAACAAATGAACGGACTCGATTTATCGGTGAAACGTGACGGTGACGATGAATTCGACGAGAACGACGACGAAGACAATGAAGATCATAGTCGACTATCGGACAACGAATCAATCGAAGATCCCATGGAACACCTAAAACATGATACGAGTAAAAATCTAACACCAACATCATCGGCATCGCTAACCGCATCGATGATTGCGCGCAGCTCGAGACGCAAACCAGCCGCACCGCAATGGGTGAATCCCGATTGGCAGGACGATAAAATAGTGGCGGGCAATGGTGGCGCCACAAACGTCGATGGCAGCACAAATAAATCCAAATCCGATGAAGTTATAATCAATGGTGTGTGCGTTATGCAGCAGGCAGCCGATTTTAGTCGCCTGAACGATCATACGCTACGCATTGAACCATCGTCGTTtaacgacgacgacgacgatgatgatgtaCGCAACAAATCGGTTCCAATTATAAAAACGGAAAAAATTGCGACAAACGAGCGGGACGATAATTGTGAGGAGGTTGACGAAGACGATATTGAAGCAAacgatttaacaaatattaacgatagtaataacaataataatgatagcGGTGATGATAATAAAacgaataacaacaacaatcataGTAATTTAGTGGATGAGgcgacaaaaaaaatcaaaactgaactaaacgATGCAGCGGACACGGATCGATGGGACTACTAA
Protein Sequence: MQPTLPQSNAGAADMDLPAAQSMDWLFRKERIYLLAQFWQQRATLAEKEVNTLKEQLSNTSITSSNSTTSTSSLSPNTTSAAHAAAAAAASLLNKLNLSQTQQNGIPNSPPLSMTSSVDLMNPLTNNSKLLNNNNSNSVNNKNNNSKSNELLDKSEMKENSNYNNILDEEDDEIDEEISKINSSKMDTLSNSSSNNNNKSIKNNNNNSSKINNHHLNNDDDNDNNNNNGDNNNILDDDDDDDVANKLNSSTLSSRSSTPAHQQQNNDKENSDSNNINSSNNNNSNLNNNSNSISTRTLAEELAAKDKEISALVEEVSRLRSAITALQESHQSQLKRLEDRIDAKRQHITRLESRIDNQSEYDDVKKENSILRSVDFSSPQSSDTKQFQELLLERTKALAAQTEAIKSSNSDGTSTTNTTTTTANQDCQPLQQSQQSQQPKLIVKNLTSNSPSPQPIDIPSSSSSSSIINCVTPSITPVPLPILTGSSSEPAKINLTPQSKLLNQTAPPSTGTTGNLQNVEQFGSFLGEEIVSNWRREITRERNNSYNHHNLRLNQSNNNNIINNNNNSNNNNSNNDHLNSPLLDGNHSLTHPDNDKSRSSHHDASSRASTPILMSGGQDGRLSGISEENMHLNGLTALSQMSLNHHHHHSHHHQLQQYHHQLNQHHHQQLHQMSKSPSDDNQQSSGLGGPSNTGGNLMPGLPFQFQDRGHFRFADDLQMPPGSMVGRLGDSLIPKGDPMEARLQEMLRYNMDKYSNQSLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDKLDSSITQYGGRPENDITDERIQHILGEAANLMKTPSNSGGINLPMNSQSQPPILQPNNIQTTQSSASTTSSNISAGGGNGLNVMSQLVPQQSIKTEDMISNDEDSKSPPPNHCDSPFFPSSSKDSMLRNKVKKYDNDDISHEKVTRIYQEELAKLMSRAPPNILFPHFFTGGAAAAAAAAAAVSNNSQNSNGGNTQNNILPSTSPMPDDNIRLALEAYHRELAKIQAGGANLPNFPNFPNLPGLLALQQHALNGAQDLSLPKEKQMKINGSSQSMMSIDCESSKDMDESQSGRQSGSAFSLVRPKNESTPTTTASSAPSPIGNSILPPAITPTDDLAASPLQRMASITNSLITQPPVTPHHSTPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQIPSAISKAMPMMPKLMGEQLSKMQEEQQHRMLQQLQQVSPMAPHIPTSQPQTMLLTPPGLPPHHAISLSSQEKAKQQAQAAAAAAAVAQQAQQLQQQQAQHAAQQNMPMPIHSPQQQSNNPMRNMNQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADTNNVERLQVLKNERREANKRRRSTGPGAQDNSSDTSSNDTSEFYHSNSPGPASVGSASTGPPNKKQRVLFSEEQKEALRLAFQLDPYPNVATIEFLANELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPVPSRDSVSGQPFDQNQFRALLHQRLMELQKERMGISGVPLPYAPYFAANPNLAALIQRGLIPGGDAASFAALNNAFKQEQMNGLDLSVKRDGDDEFDENDDEDNEDHSRLSDNESIEDPMEHLKHDTSKNLTPTSSASLTASMIARSSRRKPAAPQWVNPDWQDDKIVAGNGGATNVDGSTNKSKSDEVIINGVCVMQQAADFSRLNDHTLRIEPSSFNDDDDDDDVRNKSVPIIKTEKIATNERDDNCEEVDEDDIEANDLTNINDSNNNNNDSGDDNKTNNNNNHSNLVDEATKKIKTELNDAADTDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01459265;
90% Identity: iTF_01459265;
80% Identity: iTF_01457224;