Basic Information

Insect: Tiliacea citrago
Gene Symbol: -
Assembly: GCA_963921375.1
Location: OY992810.1:7201722-7213573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.6 2.3e+02 4.0 3.2 1 22 352 372 352 373 0.90

2 19 0.16 24 7.1 0.7 2 23 444 465 443 465 0.96

3 19 4.5e-05 0.0066 18.3 1.2 1 23 469 491 469 491 0.97

4 19 0.012 1.8 10.6 0.4 1 23 496 519 496 519 0.90

5 19 0.044 6.6 8.8 0.6 2 23 527 549 527 549 0.94

6 19 0.0072 1.1 11.3 1.0 2 23 557 578 556 579 0.94

7 19 0.00062 0.093 14.7 0.2 2 23 586 607 585 607 0.95

8 19 0.001 0.15 14.0 1.4 1 23 613 635 613 635 0.97

9 19 0.5 74 5.5 0.2 1 12 641 652 641 654 0.90

10 19 4.2 6.3e+02 2.6 0.6 1 23 743 766 743 771 0.86

11 19 0.0078 1.2 11.2 1.7 1 23 791 814 791 814 0.98

12 19 0.0018 0.26 13.2 3.0 1 23 836 858 836 858 0.97

13 19 0.00036 0.053 15.4 0.7 1 23 862 884 862 884 0.96

14 19 1.5 2.2e+02 4.1 1.7 1 10 889 898 889 912 0.86

15 19 0.01 1.5 10.9 0.1 2 23 919 941 919 941 0.94

16 19 5.6e-05 0.0083 18.0 3.0 2 23 949 971 948 971 0.96

17 19 0.0002 0.029 16.3 4.2 1 23 977 999 977 999 0.98

18 19 6.6e-06 0.00098 20.9 1.1 1 23 1005 1027 1005 1027 0.98

19 19 0.0091 1.4 11.0 4.4 3 23 1035 1056 1034 1056 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.6	2.3e+02	4.0	3.2	1	22	352	372	352	373	0.90
2	19	0.16	24	7.1	0.7	2	23	444	465	443	465	0.96
3	19	4.5e-05	0.0066	18.3	1.2	1	23	469	491	469	491	0.97
4	19	0.012	1.8	10.6	0.4	1	23	496	519	496	519	0.90
5	19	0.044	6.6	8.8	0.6	2	23	527	549	527	549	0.94
6	19	0.0072	1.1	11.3	1.0	2	23	557	578	556	579	0.94
7	19	0.00062	0.093	14.7	0.2	2	23	586	607	585	607	0.95
8	19	0.001	0.15	14.0	1.4	1	23	613	635	613	635	0.97
9	19	0.5	74	5.5	0.2	1	12	641	652	641	654	0.90
10	19	4.2	6.3e+02	2.6	0.6	1	23	743	766	743	771	0.86
11	19	0.0078	1.2	11.2	1.7	1	23	791	814	791	814	0.98
12	19	0.0018	0.26	13.2	3.0	1	23	836	858	836	858	0.97
13	19	0.00036	0.053	15.4	0.7	1	23	862	884	862	884	0.96
14	19	1.5	2.2e+02	4.1	1.7	1	10	889	898	889	912	0.86
15	19	0.01	1.5	10.9	0.1	2	23	919	941	919	941	0.94
16	19	5.6e-05	0.0083	18.0	3.0	2	23	949	971	948	971	0.96
17	19	0.0002	0.029	16.3	4.2	1	23	977	999	977	999	0.98
18	19	6.6e-06	0.00098	20.9	1.1	1	23	1005	1027	1005	1027	0.98
19	19	0.0091	1.4	11.0	4.4	3	23	1035	1056	1034	1056	0.97

Sequence Information

Coding Sequence: ATGTCGGTGGTAAAAACTGAGATAGAGACGTTTTTCGGTAGATGTAGGTGTTGTCTATCGTATGGCTACTTAAAAAACATGTGGGCAGAACATCCATTTGAAGGAGAACCAGAAATCTACGGCGATATGCTTGTCCAATGTTTTGCACTGACTTGGGATCATTCGGAGGACTCTATGGAACAGGATCGGATTTGCGAGCAGTGCATCTGTCGGTTGCGAGATGCTAGTGACTTTAAGAGGGTGGTCTTGGACTCACAAGAAGAGCTGTTCCAGCAGATAGATGCTGAAAACCTCAAAGACGAAAGTCTAGAGGAGGACTTTCTGATAGAATACAAAGATTCTGAGGGTGAAGACACTGCGGACATTACATATGCTGAAGAAGACACTGTGACGAGTGTCAAAGATGAGACAGAGTATGAGGAGGTTGAGTATTTGGAAGATGAAGATGCTGGTGGAGCAAATGATGCTGTTGATACTGGCTCATCACAACCAACAGATCAGTCGAAACCAGCAAAACGGCGGAAACAACCTCGCAAAAAAGACTCCGATGATGAGGAAACGCCTAAACGGAAATGGCCCAAAAAGCTGCCCAAATCAGAACGACACAGAACTTACAAACAATACTCCGAGGTTGATCTACGCAAATGTCTAGAAGAAGTCAGGAACAATGTACTGACGGCTGCTGAAGCGGCTTTGAAGTATGATATACCGAAGAAGACCATTTGTGCCAAGATTAAAGTGGATCCCAATGATGTCCGGACAGACATCCAGAACTCTATAAACAACACAACTACCCCCGAAACTGTGACAACGAGCGAAATAGAGGTACCCACACTATCATACGAAGAGACAAATCAAACGGACACAGATACAGAAAGCCAAGAAATTCAAAACAAGTACCCACTATCACACGAAGAGGCAAATGAGACAGGCTCAGAGGCAGAAAGCCCGGAAGTACCAAACAAGTTCCAAATGCTCAGACACAAGAATAATCTCAAAATCATACTTAAATACTCCAACGCAACATTAATCAAAGGAAATTCAGCTGCTGGATACTCCTGCTGGTTTTGCGACAAACATTTAAATCCGGAAAAACTAAAAAAGCACAATTTTGAACACGGAGATGTGTATGATGATGCTATAAAAGTGAAATACGTTTcggatttaataataaaacttgatGTTACTGGACTTAAATGTAGGCTATGTGAAGAAGAAATCAACAGTCTTGAAGCATTGATGGGTCATTTCCAAGAAGATCATAACAAAACTATTTATACGGACATAGACAACCATTTTATACCTTTTAAGTTTGATACGGACGAGTTACAATGCGTAATTTGTGCAGCAgaattcaaatatttcaaacTACTCTCAGAACATATGTGCGAACACTATAGTAACTACAATTGTCCAGAATGCGACcgtgtatttataaataaacaatcaatGCAAACACATAGATACAGACATAAAAAAGGAGAATACAAATGTTCTCAATGCCCAAAAATATTCGACAGTCCCATGAAAATACGTGAACACGAATACGTAACTCACAAACTATCGAATAAGAAGAGAAAATGTGGCTTCTGTAGCGAAAAATTCTCGTCAGCAGACCTAGTAAAGAATCACGAAGCTAGAAAACATGGCGTCGCTCGTTCTAAGATTACCTGTGAAGCTTGCAACAGGCCTTTCGCTACCTTGAAAGGTCTTGCAACACATAAGAAGAGGCACCATCTATTAATGCGTTCTATTGAATGTGAAACTTGTGGGAGAGGGTTTTATACACGACAAGAACTCAACTGGCACTCCGTCACTCATACAAAGACTAAGGAATTTCATTGCAAACAATGTGATAACTCGTTTGGCACAAAACCTGCGCTAAGTCAGCACTTAAGGGCACATAGAGGTTATAGGAAGTATAAGTGTGAATATTGTGACGCGGCGTTTGTTCATATGAATGTCCAGATTGACAATACAACGAAATCCAACAATATAAGGAATCTAAGGAAAAGACCTACATCTGAAATCAAAGTGACGAATGATACAGGAACAAAAAAAGATCGCAAGTCGAGCGAAGGGAACTTCGATCAAGAAAGAGTCGAAAATATGAAAGAACATTCTAACCCAGATGATCAACGTTTCATGTACAAACATAAAGCTAATATTAAAGCTATATTACAAAATTCTAACGCGACACTCATAAAAACATACGGAAGAGACGGATATTCATGCAATTTCTGCGACTTTCAAGCCGAAAAACCCAATGTATTGAAGCAGCATAATCTGAAAATACACACCGATATAGGACAcgaagtcataaaaacaaaatatgtatCAGATTTGATCATAAAGTTAGATATAACAGATTTCAAATGCAAGTTATGCAAAGAACCTATGAACACTTTAGAAGAGTTCACGAGACATCTACGTAAAACACACTCCAAACTTATTTATACtgacgtcaaaaattacaacatTCCTTTCAAATTCGACTCCGACGATTTCCGGTGCTTCATGTGTGATAAAAACTTCAAGTATTTCAAGCTTCTCTCCGAACATATGACTGAACATTACCGAAATTTCGACTGTCCTGTTTGCGAACGTAGTTTCATCAATAAACAGTCAATGCAGATCCATACGTATAGACACAAAAAAGGGATTTTCAAATGCTCTTACTGCTCCAAAGAGTTTGACTGTCGCCCGAAACGGGCCGACCATGAAAGAGCCATGCATATTGGCGGCAAGTTCAGGAAATGTGCGTACTGCGACCAACGGTTCCCAACTTGGGATGCCGTACTTGACCATGAGCTTAAGGCACACGGGGTGGCGAAACCCACACTCACATGCGAAGACTGTGGAAAGACTTATACCAAACAAAGTTGTTTAACAATGCATAAAAATCGCGTCCACCTCTTGAAGAAACCTCACAAGTGTACCTCCTGCGATAAGGCTTTCTGCACGAAAGTGGAGTTGAACTATCATATTGTAACTCATACGAAAACGAGGAACCATAGCTGTGAGATTTGTAAGAAGGCGTTCGGTACGCCGATCACTTTGTCGCAGCATATGCGGACTCATACAGGGGTTAAAAAACTCCTTTGTGATTACTGTGACCGACGGTTCTTACACAGAACTACTTTTAGAAGGCATATGAGAGAGACGCATGGAGAAATTGTGTGA
Protein Sequence: MSVVKTEIETFFGRCRCCLSYGYLKNMWAEHPFEGEPEIYGDMLVQCFALTWDHSEDSMEQDRICEQCICRLRDASDFKRVVLDSQEELFQQIDAENLKDESLEEDFLIEYKDSEGEDTADITYAEEDTVTSVKDETEYEEVEYLEDEDAGGANDAVDTGSSQPTDQSKPAKRRKQPRKKDSDDEETPKRKWPKKLPKSERHRTYKQYSEVDLRKCLEEVRNNVLTAAEAALKYDIPKKTICAKIKVDPNDVRTDIQNSINNTTTPETVTTSEIEVPTLSYEETNQTDTDTESQEIQNKYPLSHEEANETGSEAESPEVPNKFQMLRHKNNLKIILKYSNATLIKGNSAAGYSCWFCDKHLNPEKLKKHNFEHGDVYDDAIKVKYVSDLIIKLDVTGLKCRLCEEEINSLEALMGHFQEDHNKTIYTDIDNHFIPFKFDTDELQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSQCPKIFDSPMKIREHEYVTHKLSNKKRKCGFCSEKFSSADLVKNHEARKHGVARSKITCEACNRPFATLKGLATHKKRHHLLMRSIECETCGRGFYTRQELNWHSVTHTKTKEFHCKQCDNSFGTKPALSQHLRAHRGYRKYKCEYCDAAFVHMNVQIDNTTKSNNIRNLRKRPTSEIKVTNDTGTKKDRKSSEGNFDQERVENMKEHSNPDDQRFMYKHKANIKAILQNSNATLIKTYGRDGYSCNFCDFQAEKPNVLKQHNLKIHTDIGHEVIKTKYVSDLIIKLDITDFKCKLCKEPMNTLEEFTRHLRKTHSKLIYTDVKNYNIPFKFDSDDFRCFMCDKNFKYFKLLSEHMTEHYRNFDCPVCERSFINKQSMQIHTYRHKKGIFKCSYCSKEFDCRPKRADHERAMHIGGKFRKCAYCDQRFPTWDAVLDHELKAHGVAKPTLTCEDCGKTYTKQSCLTMHKNRVHLLKKPHKCTSCDKAFCTKVELNYHIVTHTKTRNHSCEICKKAFGTPITLSQHMRTHTGVKKLLCDYCDRRFLHRTTFRRHMRETHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00123600; iTF_00039109; iTF_00925069; iTF_00758481; iTF_00374493;
90% Identity: -
80% Identity: -