Basic Information

Insect: Luperina nickerlii
Gene Symbol: -
Assembly: GCA_963855955.1
Location: OY979692.1:4969798-4978695[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.16 18 7.2 4.5 1 23 411 432 411 432 0.91

2 18 0.15 16 7.4 1.3 2 23 503 524 502 524 0.96

3 18 5.2e-05 0.0058 18.2 1.2 1 23 528 550 528 550 0.97

4 18 0.031 3.4 9.5 0.4 1 23 555 578 555 578 0.90

5 18 0.012 1.3 10.8 0.4 2 23 586 608 586 608 0.94

6 18 0.00059 0.066 14.9 2.0 2 23 616 637 615 638 0.94

7 18 0.00029 0.032 15.9 0.2 2 23 645 666 644 666 0.95

8 18 0.00039 0.043 15.5 1.2 1 23 672 694 672 694 0.97

9 18 9.6 1.1e+03 1.7 1.2 1 23 784 807 784 808 0.82

10 18 0.74 83 5.1 0.4 1 23 832 855 832 855 0.95

11 18 0.0021 0.23 13.2 3.0 1 23 877 899 877 899 0.97

12 18 5.8e-05 0.0064 18.1 1.3 1 23 903 925 903 925 0.96

13 18 0.03 3.3 9.5 0.7 1 23 930 953 930 953 0.91

14 18 0.0046 0.51 12.1 0.1 2 23 960 982 960 982 0.94

15 18 4.7e-06 0.00052 21.5 4.1 1 23 989 1012 989 1012 0.96

16 18 0.0019 0.22 13.3 2.9 1 23 1018 1040 1018 1040 0.98

17 18 4.9e-05 0.0055 18.3 4.1 1 23 1046 1068 1046 1068 0.98

18 18 0.01 1.1 11.0 4.3 3 23 1076 1097 1075 1097 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.16	18	7.2	4.5	1	23	411	432	411	432	0.91
2	18	0.15	16	7.4	1.3	2	23	503	524	502	524	0.96
3	18	5.2e-05	0.0058	18.2	1.2	1	23	528	550	528	550	0.97
4	18	0.031	3.4	9.5	0.4	1	23	555	578	555	578	0.90
5	18	0.012	1.3	10.8	0.4	2	23	586	608	586	608	0.94
6	18	0.00059	0.066	14.9	2.0	2	23	616	637	615	638	0.94
7	18	0.00029	0.032	15.9	0.2	2	23	645	666	644	666	0.95
8	18	0.00039	0.043	15.5	1.2	1	23	672	694	672	694	0.97
9	18	9.6	1.1e+03	1.7	1.2	1	23	784	807	784	808	0.82
10	18	0.74	83	5.1	0.4	1	23	832	855	832	855	0.95
11	18	0.0021	0.23	13.2	3.0	1	23	877	899	877	899	0.97
12	18	5.8e-05	0.0064	18.1	1.3	1	23	903	925	903	925	0.96
13	18	0.03	3.3	9.5	0.7	1	23	930	953	930	953	0.91
14	18	0.0046	0.51	12.1	0.1	2	23	960	982	960	982	0.94
15	18	4.7e-06	0.00052	21.5	4.1	1	23	989	1012	989	1012	0.96
16	18	0.0019	0.22	13.3	2.9	1	23	1018	1040	1018	1040	0.98
17	18	4.9e-05	0.0055	18.3	4.1	1	23	1046	1068	1046	1068	0.98
18	18	0.01	1.1	11.0	4.3	3	23	1076	1097	1075	1097	0.97

Sequence Information

Coding Sequence: ATGTCGATGGAAAAAGCTGAGGTAGAGACGTTTTTCGGTAGATGTAGGTGTTGTCTCTCCTATGGCTACTTAAAAAACATGTGGGCAGAACATCAATTTGAAGGAGAAGCAGAAATCTACGGCGAGATGCTTGTTCAATGTTTTGCACTGACTTGGGACCATTCGGAGGACTCGATGGAACAGGATCAGATATGTGAGCAGTGCATCTATCGGTTGCGAGATGCGAATGACTTTAAGAGGGTGGTCTTGGACTCACAAGCGGAGCTGTTCCAGCAGATAGATGCTGAAAATGAAACGAGCATCAAAGAAGAAAGACTAGATGAGGAATTACTTATAGAGTACGATCCTCCTGACAGCGAAGACACTGCAGACACTATGTATGCTGAAACAGAATACACTATGGACACTGCTGACACTGTGACGAATGTCAAAGAAGAAACGGAGTATGAGGAGGTTGAGTATTTGGAAGAAGAAGACGCCAGTGGAGCGAATGATGCTGTTGATACTGACTCCTCACGCCCAACAGATCAGTTAAAACCCGCAAAACGGCGAAAGCAACCTCGTAAACAAGACACAGATGACGAGGAAACGCCAAAACGGAAATGGCCCAAAAAGCTGCCCAAATCGGAACAGCACAAGACTTACAAACAATACTCGGAGCTTGATCTACGCAAATGTTTGGAAGAAGTTAGGAACAATGTACTGACGTCTGCTGAAGCGGCTTTGAAGTATGATATACCAAGGAAGACTATTTGTGCCAAGATCAAAGTGGATCCTAACGATGTCCGGACAGACATCCAGAACTTTATAAACAACACAACTACCCGCGAAACTGTGACAATGAGCCAAATAGAGATACCCATACTATCACACGAAGATACAATTCAAACGGACACAGATACAGAAAGCCAGGACAAACAAGAGACAAACAAGTACCCAGTACCACACGAAGAGGCGAAAGTGACATACTTGGACACAGAGAGCCAAAAAGTGCCAAACAAGTACCAAGTATCGCACAAAGAGCCAAAAGAGACAAAATCAGAGGGAGAAAGCCAGGAAGTACCAATCAAGTACCCAATATTAGACGAAGAGGCAAAAAAGACAAACTCTGACACAGAAAGTCAGGGAGAAGTACCAAACAAGATCCAAATGCGTAAACACAAAAATAACCTCAAAATTATCCTTAAATACTCAAACGCAACATTAATTAAAGGAAATACAGCCGCAGGATACTCCTGCTGGTTTTGCGATAAACATTTTAGTccagaaaaactaaaaaaacataattttcaaCATGGAGATATGTACGATGATGCTATAAAAGTTAAATACGtttcaaatttaattataaaacttGATGTTACTGGACTTAAATGCAGGCTATGTGAGGAAGAAATCGACAGCCTTGAACATTTAATGGGCCATTTCCAAGAAAATCATAACAAAACTATTTATACGGACATAGACAACCATTTAATACCTTTTAAATTTGACACGGACGAGTTACAATGCGTTATTTGTGCAGcaaagttcaaatacttcaaactACTCTCAGAGCATATGTGTGAACATTACAGTAACTACAATTGCCCGGAATGCGACCGtgtctttataaataaacaatcaatGCAAACACATCGATACAGACATAAGAAAGGCGAATACAAATGTTCACGATGTCCAAAAATCTTCGACAGTCCTATGAAAATACGCGAACACGAATACGTAACTCACAAACTATCGAATAAGAAGAGAAAGTGCGGCTTCTGTGACGAGAAATTCTCGTCAGCAGACTTAGTAAAGAATCACGAAGCTAAAAACCATGGCGTCGCCCGTTCTCGACTTACCTGTGAAGCTTGCAACAGGTCTTTCGCTACACAGAAAAGCCTTGCAGTACATAAGAAGAGACACCATCTGTTAATGCGTCCTTTGGAATGTGAAACTTGTGGGAAAGGTTTTTATACGCGACAGGAACTCAACTGGCACTCAGTCACCCATACAAAGACCAAAGAATTTCACTGTAATCAATGTGATAACTCGTTTGGCACGAAACCTGCGCTAACTCAGCATTTAAGGGCACATAGCGATGTCCAGATTGACAATACAACGAATTCCAACAATATAAGGCGTCTAAGGAAAAGACCTACCTCTCAAATCGAAGCGACTAAACTTACGGAAACAAAAAAAGATCGCAAGTCGAGCGAAGCTAACTTAAACGTTCAAGAAAGAATCGAAAATATATCTTCCAACCCAGATGATCAACGTTTTATGTACAAACACAAGGCCATTATAAAAGCTATATTACAACATTCTAACGCGACACTCATTAAAACATACGGGAGAAACGGATATTCATGCAATTTCTGCGACTTTCAGGCCGAAAAACCTTTTGTACTAAAGCAGCATAATCTGAAGAAACACACCGATGTAGGAGACGAGGCCatcaaaacaaaatatgtatcAGATTTGATCTTAAAATTAGACACAACAGATTTTAAGTGCAAGTTATGCAAAGAACCAATGAACACTTTAGAAGAATTCATGGGACATCTTAGTAAAATACACTCCAAACTTATTTACACTGACGTCAAAAACTATATCATACCTTTCAAATTCGATTCCGACGATTTTCGATGCTTCATGTGTGACAAAAATTTCAAGTATTTCAAGCTTCTCTCCGAACATATGACTGAACATTACCGGAACTTCGACTGTCCTGATTGCGATCGTAGTTTCATCAATAAACAGTCTATGCAGACGCACACTTATAGACACAACAGGGGGATTTTCAAATGCTCTTATTGCTCCAAAGAGTTTGATTCTCGGCCGAAAAGAGCCGATCATGAAAGAGCCGTGCATATGGCTGGCAAGTATAGGAAATGTGCGTACTGTGACCGGCGATTCCCGACATGGGATACCGTACTTGACCATGAGCTCAAGGCCCACGGGGTGGCGAAACCCCAACACACATGCGAAGACTGTGGAAAGACTTTTAGCAAACAAAGTAGTTTAACAATGCATAAAAATCGCTTCCATCTCTTTAAGAAACCTCACAAGTGTTCCTCTTGCGAGATGGCTTTCTGCACAAACGTGGAGTTGAACTATCATATTATAACTCATACGAAAACGAGGAATCATAGCTGTAAGATTTGTAACAAGTCGTTCGGTACGCCGATCACTTTGTCCCAGCATATGTGTACTCATGAGGGTGTTAAAAAACTTCTTTGCGATTACTGTGACCGCCGGTTTTTACACAGAACTACTTTTAGAAGACATATGAGGGAGCAGCATGGAGAAATTGTTTGA
Protein Sequence: MSMEKAEVETFFGRCRCCLSYGYLKNMWAEHQFEGEAEIYGEMLVQCFALTWDHSEDSMEQDQICEQCIYRLRDANDFKRVVLDSQAELFQQIDAENETSIKEERLDEELLIEYDPPDSEDTADTMYAETEYTMDTADTVTNVKEETEYEEVEYLEEEDASGANDAVDTDSSRPTDQLKPAKRRKQPRKQDTDDEETPKRKWPKKLPKSEQHKTYKQYSELDLRKCLEEVRNNVLTSAEAALKYDIPRKTICAKIKVDPNDVRTDIQNFINNTTTRETVTMSQIEIPILSHEDTIQTDTDTESQDKQETNKYPVPHEEAKVTYLDTESQKVPNKYQVSHKEPKETKSEGESQEVPIKYPILDEEAKKTNSDTESQGEVPNKIQMRKHKNNLKIILKYSNATLIKGNTAAGYSCWFCDKHFSPEKLKKHNFQHGDMYDDAIKVKYVSNLIIKLDVTGLKCRLCEEEIDSLEHLMGHFQENHNKTIYTDIDNHLIPFKFDTDELQCVICAAKFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSRCPKIFDSPMKIREHEYVTHKLSNKKRKCGFCDEKFSSADLVKNHEAKNHGVARSRLTCEACNRSFATQKSLAVHKKRHHLLMRPLECETCGKGFYTRQELNWHSVTHTKTKEFHCNQCDNSFGTKPALTQHLRAHSDVQIDNTTNSNNIRRLRKRPTSQIEATKLTETKKDRKSSEANLNVQERIENISSNPDDQRFMYKHKAIIKAILQHSNATLIKTYGRNGYSCNFCDFQAEKPFVLKQHNLKKHTDVGDEAIKTKYVSDLILKLDTTDFKCKLCKEPMNTLEEFMGHLSKIHSKLIYTDVKNYIIPFKFDSDDFRCFMCDKNFKYFKLLSEHMTEHYRNFDCPDCDRSFINKQSMQTHTYRHNRGIFKCSYCSKEFDSRPKRADHERAVHMAGKYRKCAYCDRRFPTWDTVLDHELKAHGVAKPQHTCEDCGKTFSKQSSLTMHKNRFHLFKKPHKCSSCEMAFCTNVELNYHIITHTKTRNHSCKICNKSFGTPITLSQHMCTHEGVKKLLCDYCDRRFLHRTTFRRHMREQHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441317;
90% Identity: iTF_00123600;
80% Identity: -