Basic Information

Insect: Gortyna flavago
Gene Symbol: -
Assembly: GCA_963669345.1
Location: OY770155.1:3950168-3957944[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.16 13 7.3 4.5 1 23 386 407 386 407 0.91

2 18 7.8 6.3e+02 1.9 0.1 2 23 433 455 432 455 0.89

3 18 0.19 15 7.0 0.7 2 23 478 499 477 499 0.96

4 18 5.1e-05 0.0041 18.2 1.2 1 23 503 525 503 525 0.97

5 18 0.014 1.1 10.6 0.4 1 23 530 553 530 553 0.90

6 18 0.011 0.93 10.9 0.4 2 23 561 583 561 583 0.94

7 18 0.0012 0.095 14.0 1.3 2 23 591 612 590 613 0.94

8 18 0.00028 0.023 15.9 0.2 2 23 620 641 619 641 0.95

9 18 0.00025 0.02 16.1 0.4 1 23 647 669 647 669 0.98

10 18 0.088 7.1 8.1 2.0 1 23 807 830 807 830 0.97

11 18 0.0017 0.14 13.5 3.5 1 23 852 874 852 874 0.97

12 18 1.4e-05 0.0011 20.0 0.8 1 23 878 900 878 900 0.97

13 18 0.029 2.4 9.6 0.7 1 23 905 928 905 928 0.91

14 18 0.0052 0.42 11.9 0.1 2 23 935 957 935 957 0.94

15 18 1.8e-05 0.0015 19.7 3.9 1 23 964 987 964 987 0.96

16 18 0.0017 0.14 13.5 3.3 1 23 993 1015 993 1015 0.98

17 18 7.2e-06 0.00058 20.9 1.9 1 23 1021 1043 1021 1043 0.98

18 18 0.0097 0.79 11.1 4.3 3 23 1051 1072 1050 1072 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.16	13	7.3	4.5	1	23	386	407	386	407	0.91
2	18	7.8	6.3e+02	1.9	0.1	2	23	433	455	432	455	0.89
3	18	0.19	15	7.0	0.7	2	23	478	499	477	499	0.96
4	18	5.1e-05	0.0041	18.2	1.2	1	23	503	525	503	525	0.97
5	18	0.014	1.1	10.6	0.4	1	23	530	553	530	553	0.90
6	18	0.011	0.93	10.9	0.4	2	23	561	583	561	583	0.94
7	18	0.0012	0.095	14.0	1.3	2	23	591	612	590	613	0.94
8	18	0.00028	0.023	15.9	0.2	2	23	620	641	619	641	0.95
9	18	0.00025	0.02	16.1	0.4	1	23	647	669	647	669	0.98
10	18	0.088	7.1	8.1	2.0	1	23	807	830	807	830	0.97
11	18	0.0017	0.14	13.5	3.5	1	23	852	874	852	874	0.97
12	18	1.4e-05	0.0011	20.0	0.8	1	23	878	900	878	900	0.97
13	18	0.029	2.4	9.6	0.7	1	23	905	928	905	928	0.91
14	18	0.0052	0.42	11.9	0.1	2	23	935	957	935	957	0.94
15	18	1.8e-05	0.0015	19.7	3.9	1	23	964	987	964	987	0.96
16	18	0.0017	0.14	13.5	3.3	1	23	993	1015	993	1015	0.98
17	18	7.2e-06	0.00058	20.9	1.9	1	23	1021	1043	1021	1043	0.98
18	18	0.0097	0.79	11.1	4.3	3	23	1051	1072	1050	1072	0.97

Sequence Information

Coding Sequence: ATGTCGGTAGAAAAAGCTGAGATAGAGACGTTTTTCGGTAGATGTAGATGTTGTCTCTCCTATGGATACCTAAAAAACATGTGGGCAGAACATCAATTTGAAGGAGAAGCAGAAATCTACGGCGAGATGCTTGTCCAATGTTTTGCACTGACTTGGGATCATTCGGAGGACTCGATGGAACAGGATCAGATATGTGAGCAGTGCATCTATCGGTTGCGAGATGCAAGTGACTTTAAGAGGGTGGTCTTGGACTCACAAGCAGAGCTGTTCCAGCAGATAGATGCTGAAAAAGAGTTGAGCATCAAAGAAGAAAGACTAGATGAGAAACTCCTCATAGAGTACAACCCTCCTGACAGCGAAGACACTGCGGACACTATGTATGCTGACACAGAATACACTATGGATACTGCTGACACTGTGACGAGTGTCAAAGATGAGACGGAGTATGAGGAGGTTGAGTATTTGGAAGAAGAAGACGCTGATGGAGCGAATAATGCTGTTGATACTGACTCCTCACAGCCAACAGATCAGTTAAGACCCGCAAAACGGCAAAAGCAACCTCGTAAACAAGACACAGATGACGAGGAAGCGCCAAAACGGAAATGGCCTAGAAAGCTGCCCAAATCGGAACGGTACAGGACTTACAAACAATACTCCGAGGTTGATCTACGCAAATGTTTGGAAGAAGTTAGGAACAATGTACTGACGGCCACTGAAGCGGCTTTAAAGTATGATATACCGAAGAAGACTATTTGTGCCAAGATCAAAGTGGATCCTAACGATGTCCGGACAGACATCCAGAACTCTATAAACAACACAACTATCCGCGAAACTGTGACAACGAGCCCAATAGAGGTACCCATACTATCACACGAAGACACAATTCAAACGGACACAAATACAGTAAGCCAGGAAGTGACAAACAAGTACGCAATTTCACACAAAGAGGCAAAAGGAACAGAGTCAGAGGCAGAAAGCCAGGAAGTACCAATCAAATACCCAATATTTGACGAAGAGGCAAACAAGACAAACTCGGATACAGAAAGCCAGGGAGAAGTACCCAACAAGATCCAAATGCTTAAACACAAGAATAACCTCAAAATGATCCTTAAATACTCAAACGCAACATTAATTAAAGGAAATTCAGCCGCAGGATACTCCTGCTGGTTTTGCGATAAACATTTTAGTCCAGAAAAACTAAAGAAACATAATTTTCAACACGGAGATGTGTACGATGATGCCATAAGAGTAAAATACGTTTcagatttaattataaaacttgATGTTACTGGACTTAAATGTAGAATATGTGAGGAAGAAATCGACAGTCTTGAACAATTGATGGGCCATTTCCAAgaaaatcataacaaaactaTTTATACGGACATAGACAACCATTTAATACCTTTTAAATTTGACACGGACGAGTTACAATGCGTTATTTGTGCAGCAGAGTTCAAATacttcaaactactttcagAGCATATGTGTGAACATTACAGTAACTACAATTGCCCGGAATGCGACCGcgtctttataaataaacaatcaatGCAAACACATCGATACAGACATAAGAAAGGAGAATACAAATGTTCACAATGCCCAAAAATCTTCGACAGTCCCATGAAAATACGCGAACACGAATACGTAACTCACAAACTATCGAATAAAAAGAGAAAGTGTGGCTTCTGCGACGAGAAATTCTCGTCAGCAGACTTAGTAAAGAATCACGAAGCTAAAAACCATGGTGTCGCCCGTTCTAGACTTACTTGTGAAGCTTGCAACAGGCCTTTCGCTACACAGAAAAGTCTTGCAGTACATAAAAAGAGACACCATCTAGTAATGCGTCCTTTGGAATGTGAAACTTGTGGGAAAGGTTTTTATACGCGACAGGAACTTAACTGGCACTCAGTCACCCATACAAAGACCAAAGAATTTCAGTGTTATCAATGTGATAACTCGTTTGGCACGAAACCTGCGCTAACTCAGCATTTAAGGGCACATAGAGATGTCCAGATTGACAATACAACGAATTCCAACATTATACAGCGTCTAAGGAAAAGACCTACCTCTGAAATCGAAGCGACAAAagttacagaaacaaaaaaagatCGCACGTCGAGCGAAGCTAACTTAAACGTTCAAGAAAGAATCGAAAATATACCTTCGAACCCAGATGATCAACGTTTTATGTACAAACACAAGGCCAATATAAAAGCTATATTACAACATTCTAACGCGACACTCATTAAAACATACGGGAGGGACGGATATTCATGCAATTTCTGCGACTTTCAGGCTGAAAAATCGTTTGTACTAAAGCAGCATAATCTGAAGAAACACACCGATGTAGGAGACGAGGCcatcaaaacaaaatatgtatcAGATTTGATCTTAAAATTAGACACAACAGATTTTAAGTGCAAGTTATGCAAAGAACCAATGAACACTTTAGAAGAATTCATACGACATCTTTGTAAAATACACTCCAAACTTATTTACACTGACGTCAAAAACTATATCATTCCTTTCAAATTCGATTCCGACGATTTTCGATGCTTCATGTGTGATAAAAAATTCAAGTATTTCAAGCTTCTTTCCGAACATATGACTGAACATTACCGGAACTTCGACTGTCCTGATTGCGATCGTAGTTTCATCAATAAACAGTCTATGCAGACGCACATTTATAGACACAACAGGGGGATTTTCAAATGCTCTTATTGCTCCAAAGAGTTTGATTCTCGGCCGAAAAGAGCCGACCATGAAAGAGCCGTGCATATGGCCGGCAAGTATAGGAAATGTGCGTACTGTGACCGACGATTCCCGACATGGGATGCCGTACTTGACCATGAGCTCAAGGCCCACGGGGTGGCGAAACCCCAACACACTTGCGAAGACTGCGGAAAGACGTATAGCAAACAAAGTAGTTTAACAATGCATAAAAATCGCTTCCACCTCTTTAAGAAACCTCACAAGTGTTCTTCTTGCGAGATGGCTTTCTGCACGAAAGTGGAGTTGAACTATCATATTATCACTCATACGAAAACGAGGAATCATAGCTGTAAGATTTGTAACAAGTCGTTCGGTACACCGATCACTTTGTCCCAGCATATGCAGACTCATGAGGGTGTTAAAAAACTTCTTTGTGATTACTGTGACCGCCGGTTCCTACACAGAACTACTTTTAGGAGGCATATGAGAGAGCAGCATGGAGAAAttgtttga
Protein Sequence: MSVEKAEIETFFGRCRCCLSYGYLKNMWAEHQFEGEAEIYGEMLVQCFALTWDHSEDSMEQDQICEQCIYRLRDASDFKRVVLDSQAELFQQIDAEKELSIKEERLDEKLLIEYNPPDSEDTADTMYADTEYTMDTADTVTSVKDETEYEEVEYLEEEDADGANNAVDTDSSQPTDQLRPAKRQKQPRKQDTDDEEAPKRKWPRKLPKSERYRTYKQYSEVDLRKCLEEVRNNVLTATEAALKYDIPKKTICAKIKVDPNDVRTDIQNSINNTTIRETVTTSPIEVPILSHEDTIQTDTNTVSQEVTNKYAISHKEAKGTESEAESQEVPIKYPIFDEEANKTNSDTESQGEVPNKIQMLKHKNNLKMILKYSNATLIKGNSAAGYSCWFCDKHFSPEKLKKHNFQHGDVYDDAIRVKYVSDLIIKLDVTGLKCRICEEEIDSLEQLMGHFQENHNKTIYTDIDNHLIPFKFDTDELQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSQCPKIFDSPMKIREHEYVTHKLSNKKRKCGFCDEKFSSADLVKNHEAKNHGVARSRLTCEACNRPFATQKSLAVHKKRHHLVMRPLECETCGKGFYTRQELNWHSVTHTKTKEFQCYQCDNSFGTKPALTQHLRAHRDVQIDNTTNSNIIQRLRKRPTSEIEATKVTETKKDRTSSEANLNVQERIENIPSNPDDQRFMYKHKANIKAILQHSNATLIKTYGRDGYSCNFCDFQAEKSFVLKQHNLKKHTDVGDEAIKTKYVSDLILKLDTTDFKCKLCKEPMNTLEEFIRHLCKIHSKLIYTDVKNYIIPFKFDSDDFRCFMCDKKFKYFKLLSEHMTEHYRNFDCPDCDRSFINKQSMQTHIYRHNRGIFKCSYCSKEFDSRPKRADHERAVHMAGKYRKCAYCDRRFPTWDAVLDHELKAHGVAKPQHTCEDCGKTYSKQSSLTMHKNRFHLFKKPHKCSSCEMAFCTKVELNYHIITHTKTRNHSCKICNKSFGTPITLSQHMQTHEGVKKLLCDYCDRRFLHRTTFRRHMREQHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441317;
90% Identity: iTF_00123600;
80% Identity: -