Basic Information

Insect: Cosmia pyralina
Gene Symbol: -
Assembly: GCA_946251865.1
Location: CAMIUE010000668.1:301084-310649[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.6 3e+02 3.5 5.0 1 22 364 384 364 385 0.89

2 20 9 1.1e+03 1.8 0.1 2 23 411 433 410 433 0.90

3 20 0.2 23 7.0 0.7 2 23 456 477 455 477 0.96

4 20 5.4e-05 0.0063 18.3 1.2 1 23 481 503 481 503 0.97

5 20 0.014 1.7 10.6 0.4 1 23 508 531 508 531 0.90

6 20 0.02 2.3 10.2 0.5 2 23 539 561 539 561 0.94

7 20 0.0027 0.32 12.9 1.4 2 23 569 590 568 591 0.94

8 20 0.00075 0.088 14.7 0.2 2 23 598 619 597 619 0.95

9 20 0.00041 0.048 15.5 1.2 1 23 625 647 625 647 0.97

10 20 0.58 69 5.5 0.3 1 12 653 664 653 666 0.90

11 20 9.8 1.2e+03 1.7 1.2 1 23 756 779 756 780 0.82

12 20 0.29 34 6.5 0.8 1 23 804 827 804 827 0.96

13 20 0.0021 0.25 13.2 3.0 1 23 849 871 849 871 0.97

14 20 0.0034 0.4 12.6 2.6 1 23 875 897 875 897 0.96

15 20 0.0073 0.86 11.5 1.1 1 23 902 925 902 925 0.97

16 20 0.022 2.6 10.0 0.2 2 23 933 955 933 955 0.91

17 20 0.0042 0.49 12.3 7.5 1 23 962 985 962 985 0.96

18 20 0.0045 0.52 12.2 3.3 1 23 991 1013 991 1013 0.98

19 20 5.5e-06 0.00064 21.4 0.6 1 23 1019 1041 1019 1041 0.98

20 20 0.033 3.9 9.5 7.2 1 23 1047 1070 1047 1070 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.6	3e+02	3.5	5.0	1	22	364	384	364	385	0.89
2	20	9	1.1e+03	1.8	0.1	2	23	411	433	410	433	0.90
3	20	0.2	23	7.0	0.7	2	23	456	477	455	477	0.96
4	20	5.4e-05	0.0063	18.3	1.2	1	23	481	503	481	503	0.97
5	20	0.014	1.7	10.6	0.4	1	23	508	531	508	531	0.90
6	20	0.02	2.3	10.2	0.5	2	23	539	561	539	561	0.94
7	20	0.0027	0.32	12.9	1.4	2	23	569	590	568	591	0.94
8	20	0.00075	0.088	14.7	0.2	2	23	598	619	597	619	0.95
9	20	0.00041	0.048	15.5	1.2	1	23	625	647	625	647	0.97
10	20	0.58	69	5.5	0.3	1	12	653	664	653	666	0.90
11	20	9.8	1.2e+03	1.7	1.2	1	23	756	779	756	780	0.82
12	20	0.29	34	6.5	0.8	1	23	804	827	804	827	0.96
13	20	0.0021	0.25	13.2	3.0	1	23	849	871	849	871	0.97
14	20	0.0034	0.4	12.6	2.6	1	23	875	897	875	897	0.96
15	20	0.0073	0.86	11.5	1.1	1	23	902	925	902	925	0.97
16	20	0.022	2.6	10.0	0.2	2	23	933	955	933	955	0.91
17	20	0.0042	0.49	12.3	7.5	1	23	962	985	962	985	0.96
18	20	0.0045	0.52	12.2	3.3	1	23	991	1013	991	1013	0.98
19	20	5.5e-06	0.00064	21.4	0.6	1	23	1019	1041	1019	1041	0.98
20	20	0.033	3.9	9.5	7.2	1	23	1047	1070	1047	1070	0.94

Sequence Information

Coding Sequence: ATGTCGGCGGAAAAAACTGAGATAGAGACGTTTTTCGGTAGATGTAGGTGTTGTCTCTCCTatggatatttaaaaaacatgtgGGAAGAACATCTATTTGAAGGAGAAGCAGAAATCTACGGCGAGATGCTTGTCCAATGTTTTGCACTGACTtgggatcATTCGGAGGACTCGATGGAACAGGATCAGATCTGCGAGCAGTGCATCTGTCGGTTGCGAGATGCTAGTGACTTTAAGAGGGTGGTCTTAGACTCACAAGAGGAGCTGTTCAAGCAGATAGATGGTGAAAATGAATTGAGCATCAAAGAAGAACTACTAAGTGAAGAGTTCATAGAGTATAAAGATCCTGAGAGCGAAGAGACTGCGGATGTTACATATGCTGACACAGAATACACTGTATACACTATGGACTCCACAGATACTGTTACGAGTGTCAAAGATGAGACAGAGTATGAAGAGGTTGAGTATTTGGAAGACGAAGATGCTGGTGGCACTATTGATGCTGTTGATACTGACTCCTCGCAACCAACAGATCAGTCAAGACCAGCAAAACGGCGAAACCAATCTCGCAAACAAGACACAGATGAGGAGGAAGCGCCGACACGGAAATGGCCCAAAAAGCTGCCCAAATCAGAACGCCATAAGACTTACAAACAGTATTCTGAGGTTGATCTTCGCAAATGTCTGGAAGAAGTCAGGAACAATGTACTGACGTCTGCTGATGCGGCTTTGAAGTATGGTATACCGAAGAAGACTATTTGTGCCAAGATTAAAGTGGATCCTAACGATGTCGGGACAGACATCCAGAACTCTATAAACAACACAACTACCCCCGAAACTGTGACAACGAACCAAAAAGAGGTACCCATACTATCACACGAAAATACCAATGTGATAGACTCGGACACAGAAAGCCAGGAAGTACCACACAAGTACCAACTATCACACGAAGAGGCAAGAGAGACGGACTCGGACACAGAAAGCCAGGAATTACCAAACAAGTACCAAATGCTAAAACACAAGAATAATCTCAAAATGATCCTTAAATACTCCAACGCAACATTAATCAAAGGTAATTCAGCTGCTGGTTACTCCTGCTGGTTTTGCGACCAGCATTTTAAacctaaaaaactaaaaaagcaCAATTTTGAACACGGAGACGTATACGATGATGCTATAAAAGTGAAATACGTTTcggatttaataataaaacttgatGTTACTGGGCTTAAATGTCGGCTATGTGAAGAAGAAATCAAAAGTCTTGAAGAATTGATGGGTCATTTCCAAGAAGATCATAACAAAACTATTTATACGGACATAGACAACCATTTTATACCTTTTAAGTTTGATACGGAAGAGTTACAATGCGTAATTTGTGCAGCAGAATTCAAATATTTCAAACTACTCTCAGAACATATGTGTGAACATTATAGTAACTACAACTGTCCGGAATGTGACCGtgtctttataaataaacaatcaaTGCAAACACATAGATATAGACATAAGAAAGGAGAATACAAATGTTCACAATGCCCAAAAATCTTCGACAGTCCTATGAAAATACGGGAACACGAATACGTAACTCACAAACTATcgaataaaaagagaaaatgtGGCTTCTGTGACGAGAAATTCTCGTCAGCAGAATTGGTAAAGAATCACGAAGCTAGAAAACATGGCGTCGCTCGTTCTAAGCTTACCTGTGAAGCTTGCAACAGGCCTTTCGCTACTCAGAAAGGTCTTGCAACACATAAGAAGAGGCACCATTTATTAATGCGTCCTATTGAATGTGAAACTTGTGGTAGAGGGTTTTATACGCGACAAGAACTCAACTGGCATTCCGTCACCCATACAAAGACCAAGGAGTTTCATTGCAATCAATGTGATAACTCGTTTGGCACAAAACCTGCGCTCAATCAGCACTTGAGGGCACATATAGGTTATAGGAGGTATAAGTGTGAATATTGTGATGTGGCGTTTGTTCATATGAATGTCCAGATTGACAATACAACGAAATCCAACAATATAAGGAATCTAAGGAAAAGACCTACCTCTGAAATTGAAGCGACTAAAGTTACAGACACACAAAAAGATCGCAAATCGAGCGAAGCGAAATTTAACAATCAAGAAAGAGACGAAAATATTATAGAACATACAAAGCCAGATGATCAACGTTTCATGTACAAACACAAAGCTAATATAAAAGCTATATTACAAAATTCTAACGCGacactcataaaaaaatacgggaGAGACGGATATTCATGTAATTTCTGCGACTTTCAGGCCGAAAAACCGTTTGTATTGAAGCAGCATAATCTGAAAAAACACACCGATGTAGGAGACGAAGCcatcaaaacaaaatatgtatcaGATTTGATCATAAAGTTAGATACAACAAATTTCAAATGCAAGTTATGCAAAGAACCTATGAACACTTTAGAAGAGTTTATGGAACATCTAAGTAAAACACACTTCAAACTTATTTATACTGACGTCAATAATTACATCATTCCTTTCAAATTCGACTCCGACGAGTTCAGATGCTTCATGTGTGATAAAAACTTCAAATATTTCAAGCTTCTCTCCGAACATATGACTGAACATTACCGAAACTTCGATTGTCCTGTTTGCGAACGTAGTTTCATCAATAAACAGTCAATGCATACTCATACTTATAGACACACCAGCGGGATTTTCAAATGCTCTTATTGCTCCAAAGAGTTTGATTCTCGACCGAAACGAGCAGACCATGAAAGAACCGTGCATATGGCCGGCATCAAGCGTAGAAAATGTGCGCACTGCGACCAACGATTCCCGAATTGGGATGCAGTACTTGACCATGAGCTTAACGCACACGGGGTGGCGAAACCCACACACTCATGCGAATTCTGTGGAAAGACTTATACCAAACAAAGTTGTTTAACAATGCACAAAAATCGTTTCCACCTCTTTAAGAAGCCTCACAAATGTTCCTCTTGTGAGATGGCATTCTGCACGAAAGTGGAATTGAGCTATCATATTATAACTCATACGAAAACGAGGAATCATAGCTGTGAAATTTGTAAGAAGGCGTTCGGTACGCCGATCACTTTGGCTCAACATATGCGGACGCATGCGAATGttaaaaaacacttttgtgaTTACTGTGACCGCCGGTTCTTACACAGAACTACTTTTAGAAGGCATATGAGAGGGACGCATGGAGAAATTGTCTGA
Protein Sequence: MSAEKTEIETFFGRCRCCLSYGYLKNMWEEHLFEGEAEIYGEMLVQCFALTWDHSEDSMEQDQICEQCICRLRDASDFKRVVLDSQEELFKQIDGENELSIKEELLSEEFIEYKDPESEETADVTYADTEYTVYTMDSTDTVTSVKDETEYEEVEYLEDEDAGGTIDAVDTDSSQPTDQSRPAKRRNQSRKQDTDEEEAPTRKWPKKLPKSERHKTYKQYSEVDLRKCLEEVRNNVLTSADAALKYGIPKKTICAKIKVDPNDVGTDIQNSINNTTTPETVTTNQKEVPILSHENTNVIDSDTESQEVPHKYQLSHEEARETDSDTESQELPNKYQMLKHKNNLKMILKYSNATLIKGNSAAGYSCWFCDQHFKPKKLKKHNFEHGDVYDDAIKVKYVSDLIIKLDVTGLKCRLCEEEIKSLEELMGHFQEDHNKTIYTDIDNHFIPFKFDTEELQCVICAAEFKYFKLLSEHMCEHYSNYNCPECDRVFINKQSMQTHRYRHKKGEYKCSQCPKIFDSPMKIREHEYVTHKLSNKKRKCGFCDEKFSSAELVKNHEARKHGVARSKLTCEACNRPFATQKGLATHKKRHHLLMRPIECETCGRGFYTRQELNWHSVTHTKTKEFHCNQCDNSFGTKPALNQHLRAHIGYRRYKCEYCDVAFVHMNVQIDNTTKSNNIRNLRKRPTSEIEATKVTDTQKDRKSSEAKFNNQERDENIIEHTKPDDQRFMYKHKANIKAILQNSNATLIKKYGRDGYSCNFCDFQAEKPFVLKQHNLKKHTDVGDEAIKTKYVSDLIIKLDTTNFKCKLCKEPMNTLEEFMEHLSKTHFKLIYTDVNNYIIPFKFDSDEFRCFMCDKNFKYFKLLSEHMTEHYRNFDCPVCERSFINKQSMHTHTYRHTSGIFKCSYCSKEFDSRPKRADHERTVHMAGIKRRKCAHCDQRFPNWDAVLDHELNAHGVAKPTHSCEFCGKTYTKQSCLTMHKNRFHLFKKPHKCSSCEMAFCTKVELSYHIITHTKTRNHSCEICKKAFGTPITLAQHMRTHANVKKHFCDYCDRRFLHRTTFRRHMRGTHGEIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441317;
90% Identity: -
80% Identity: -