Tbat000359.1
Basic Information
- Insect
- Thyatira batis
- Gene Symbol
- -
- Assembly
- GCA_905147785.1
- Location
- LR990495.1:8531371-8531727[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-10 2.8e-07 30.6 0.0 3 45 16 58 14 58 0.91
Sequence Information
- Coding Sequence
- ATGGAACCTTCGCAAAAAAGAAAACGGGGCTCGGGATGGTCTCAAACTGATCTTTTGGGTGCCCTTGATGATATACGAAACAACCGAATGTCTGAGCGTGCAGCAGCCTTAAAATATAATATACCACGGCGAACGTTGAAGAATCACATAAAATCTGGAAGCGCTGTGAAGAGAATGGGAAGAATAACTGTTTTTACCGACACACAGGAAAAGGAATTGGTAGAGCGAATTAAGAAGTCAAATATTGGCATGCCTTTGACACCAAAAACAATACGTAAACAAGCTTACTTATTTTGTGAAAGGAACAAAATAAAAAATCCTTTTAGTGACAAAAAATCGACCGCTGGCAAGAAATAG
- Protein Sequence
- MEPSQKRKRGSGWSQTDLLGALDDIRNNRMSERAAALKYNIPRRTLKNHIKSGSAVKRMGRITVFTDTQEKELVERIKKSNIGMPLTPKTIRKQAYLFCERNKIKNPFSDKKSTAGKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157648; iTF_01154978; iTF_00942760; iTF_01156300; iTF_01158717; iTF_01153842; iTF_01158749;
- 90% Identity
- -
- 80% Identity
- -