Mleu024356.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- -
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000028.1:4479680-4480093[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-09 4.5e-06 27.1 0.0 3 39 16 52 14 58 0.87 2 2 1.1 6.4e+02 0.9 0.0 13 23 127 137 125 137 0.83
Sequence Information
- Coding Sequence
- ATGGAACCTGCAGAACTGAGGAAACGGGGCTCAGGATGGTCTCAGACTGATCTTCAGGATGCACTAGATGATATAAAAGACAACCAGATGTCTGGGTGTGCAGCAGCTTTTAAATACAATATCCCACGGCGAACATTGACTAATCACATAAAATCTGGAAGTGTGATGAAGAGAATGGGAAGAAAACCTGTTTTTACTGACACACAAGAAAAAGAATTCGTAGACAGAATTAAGAAGTTTGAGAATACAGGCAAACCTTTAACATCAAAAATGATACGCGAACAAGCATACTtattttgtgaaagaaacaacataaaaaatcctTTTAGTGACCAAAAATCAACTGCTGGCAAGAAATGGCTTAGAAATTTCCTCGCTCGAAATAAAGATATATCTCAACGTAAAGCACAATAA
- Protein Sequence
- MEPAELRKRGSGWSQTDLQDALDDIKDNQMSGCAAAFKYNIPRRTLTNHIKSGSVMKRMGRKPVFTDTQEKEFVDRIKKFENTGKPLTSKMIREQAYLFCERNNIKNPFSDQKSTAGKKWLRNFLARNKDISQRKAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01436958;
- 90% Identity
- -
- 80% Identity
- -