Tjap005573.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Theretra japonica
Gene Symbol
sip1
Assembly
GCA_033459515.1
Location
CM065933.1:8384760-8396406[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.7e-59 8.5e-55 186.6 1.0 4 275 366 619 363 619 0.97

Sequence Information

Coding Sequence
ATGTCGGACGACGAGGTTATCCGTTTCGAGATCACCGACTACGATTTGGATAATGAATTTAATCCTAACAGAAACAGAAGAGCAAAAAAAGAACAGCAGATTTATGGTGTCTGGGCTAAAGACAGTGATGAGGAAGACAATGAGGATAATATCAGGCAGAGGACTCGCAAACCCAAGGACTTCTCTGCACCAATTGGATTTGTGGCTGGTGGTGTTCAGCAAGCTGGCAAGAAGAAAGAAGAGAAGAAAGCCGAGGCCTCAACCTCTAGACCAAAGTTTGCAGCAGACAGTTCCGATGAGGAGGCACAAGAAGTGAACCCTGATGAGAGTGACACTGCGGGCATCAGGAAACAGGGTCAAGGCATGCGGCCTCCCAACCTAGGTGGTAATGTGGGAGCCTGGGAGAGGCACACTAAGGGTATTGGTGCTAAATTGCTGTTACAGATGGGTTACCAACCAGGTAAAGGGTTGGGCAAAGACCTTCAAGGTATTTCGGCGCCCGTCGAGGCTACAGTTAGAAAAGGCAGAGGGGCTATTGGAGCTTATGGACCTGAGAAGGCGACAAAAAAAGCCAAGAAAGAGGAAGAGCGCCGTCTGAAAGAGAAGGAAGACCAGGAGAAAGAGAAGAAAGAGAAGACATATAACTGGAAGAAGTCGCACAAGGGCCGCTACTTCTACAGGGATGCCGCCGACGTCATACAAGAGGGTAAACCCACGATGCATACTATTGCCAGCAGCGAGTTGTCCCGCGTGCCGGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCTGCGAGCGCACGCGCCGCGCTACGAGCACGAGCCACGACGCAAGTGCGACAACTTCGCCGCGCCGCACCTCATACACAACCTCGAGCTCATGGTCGACTGCTGCGAACAGGATATAATCCAAAACGCCCGCGAACTGCAACAAGCAGAAGACGAGATTGTAGTGTTGGAGCGGGACCTGGAAGAGTGTAACATCAAGCTGGCAGACCAAGACGTGGTGATATCCAAAGTGCAGGCTATACTGGAGAAAGTTGAGGAACTGAATAAGCCGGAAGTGTCGTTGGAAACTGCTTATGAAGTTTTGGCTGATTTAAAGGAATTATACCCCCTGGAGTACGACATGTTCGGACTAGGAACAATAGCGGGAAACATAGTGAGTCCGTTGTTCAGCGCTTTGTTGGCCACGTGGGACCCGCTGCAAGCGCCAGAAGAGCCCCTGCCAACGTTCATCAAGTGGAGGAAACTGCTTACTGATGAAGCGTACAACAGTCTCATCTGGCAGCATTATGTAGAACATATCAATACTGCTTCGGAGTCATGGAACCCGCGCATCCCAGCGCCGATGGTCCGCGCGCTCACGTCCTGGTCGGAGGCGTGTCCTGAATGGGTGCTGTCCTCTTGTGCCTCGCGGTACGTCGTGCCTCGCGTCCTGGCCGCGGTGCGCGTGTGGGACCCCACGGGCGACACCCAGCCCCTGCACCAGTGGGTGCTGCCCTGGCATGATATAGCAGgtgacGCGTTGTCCCGCACGGTGTACCCTCTGATCCGGTCTCGCctggcggcggcgctggcgggcTGGCACCCGGCGGACGGCTCCGCGCGGGGCGTGCTggcggcgtggcggcgcgcGTGGGGCGGAGCCCTACACGCGGTACTACACCAACACGTCGTGCCCAAGCTCGAGCACTGTCTGCAACACGCGCCCGTGCATCTTGTTGGAGGGGACAATACGGCGTGGCAGTGGTGCGTGGAGTGGCTGGAGCTGCTGGGTGCTCCCACGGTGGGCGCCATCGCCAGCCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCAACCCCACGCACGCCACCGTGCTCACCTCTTACACTGAATTTAAGAAACTATTCCCAGAAGAAGTCCTAAGAGAGCCAGCGGTACGTGACGCGTTCCGCAAAGCCTTAGACATGATGAACCGCAGCACAGATTTAGAAGCCGTCGAACCCCCGCCGCCACCCCGTTTCACCCTCCCAGAGGTCAAGGAAACTTCTAGAATCGTCGACGTACTCGCCTCCGCCAGCCAACAGAAGAGTTTCTCAGAGTTACTAGAATCTAGATGTATTGACAAAGGCATTACTTTCGTCCCTATAGCCGGTAAGACTAGAGAAGGCAGGCCGCTATACAAGATAGGCGGCATGCAGTGTTATGTAATAAgaaatgttattatgtattCGAATGACGGAGGAAGAAACTTCTCGCCTATCAGTATGGATAAGTTGTTGCAGATGGTTGAGGAATAA
Protein Sequence
MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEQQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKAEASTSRPKFAADSSDEEAQEVNPDESDTAGIRKQGQGMRPPNLGGNVGAWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKATKKAKKEEERRLKEKEDQEKEKKEKTYNWKKSHKGRYFYRDAADVIQEGKPTMHTIASSELSRVPVIDMTGKEKRVLSGYHALRAHAPRYEHEPRRKCDNFAAPHLIHNLELMVDCCEQDIIQNARELQQAEDEIVVLERDLEECNIKLADQDVVISKVQAILEKVEELNKPEVSLETAYEVLADLKELYPLEYDMFGLGTIAGNIVSPLFSALLATWDPLQAPEEPLPTFIKWRKLLTDEAYNSLIWQHYVEHINTASESWNPRIPAPMVRALTSWSEACPEWVLSSCASRYVVPRVLAAVRVWDPTGDTQPLHQWVLPWHDIAGDALSRTVYPLIRSRLAAALAGWHPADGSARGVLAAWRRAWGGALHAVLHQHVVPKLEHCLQHAPVHLVGGDNTAWQWCVEWLELLGAPTVGAIASRALLPRWLAALAAWLNTNPTHATVLTSYTEFKKLFPEEVLREPAVRDAFRKALDMMNRSTDLEAVEPPPPPRFTLPEVKETSRIVDVLASASQQKSFSELLESRCIDKGITFVPIAGKTREGRPLYKIGGMQCYVIRNVIMYSNDGGRNFSPISMDKLLQMVEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00429029;
90% Identity
iTF_00819181; iTF_00428140; iTF_00787669; iTF_00290726; iTF_00859485; iTF_01010373; iTF_00341332; iTF_00063608;
80% Identity
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