Dpor014932.1
Basic Information
- Insect
- Deilephila porcellus
- Gene Symbol
- sip1
- Assembly
- GCA_905220455.1
- Location
- LR999992.1:8433051-8441917[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-35 4.3e-31 108.9 2.3 4 174 370 521 367 537 0.93 2 2 4.7e-17 5.6e-13 49.5 0.1 184 275 590 681 585 681 0.96
Sequence Information
- Coding Sequence
- ATGTCGGACGACGAGGTTATCCGTTTTGAGATCACTGATTACGACTTGGATAATGAGTTTAATCCTAACAGAAATAGAAGAGCGAAAAAAGAACAGCAGATTTACGGTGTATGGGCTAAAGACAGTGATGAGGAAGACAATGAGGACAATATCAGGCAAAGGACTCGAAAGCCCAAAGATTTCTCTGCACCAATTGGGTTTGTGGCTGGTGGTGTTCAGCAAGCTGGCAAGAAAAAAGAGGAGAAGAAAGAAATTGAACCAGCTGAAGCTTCAACCTCCCGACCAAAGTTTGCAGCAGACAGTTCAGATGAGGATGCTCAAGAAGTGAACCCAGATGAGAGCGACACTGCAGGGATCAGAAAACAGGGTCAGGGCATGCGGCCTCCCAACCTAGGTGGTAATGTTGGAGCCTGGGAGAGACACACTAAGGGTATCGGTGCTAAGTTGCTACTACAGATGGGTTACCAACCAGGCAAAGGTCTGGGTAAGGACCTGCAGGGTATATCAGCGCCAGTGGAGGCTACAGTCAGGAAAGGCAGAGGAGCCATTGGAGCTTATGGACCTGAAAAAGCAACACAAAAAGCCAAGAAAGAGGAAGAGCGCCGTCTGAAAGAGAAGGAAGATCAGGACAAGGATCCGAAAGAGAAGACGTACAACTGGAAGAAGTCGCACAAGGGCCGCTACTTCTACCGCGACGCCGCTGACGTCATACAAGAGGGTAAACCTACGATGCATACTATTGCCAGTAGCGAACTGTCCCGCGTGCCGGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGCTACCACGCGCTGCGAGCGCACGCGCCGCGCTACGAGCACGAGCCGCGCCGCAAGTGCGACAACTTCGCCGCGCCGCACCTCATACACAACCTCGAGCTCATGGTCGACTGCTGCGAACAGGATATAATTCAAAACGCCCGCGAACTCCAACAAGCAGAAGACGAGATAGTGGTATTGGAGCGGGATCTAGAAGAATGTAACATCAAACTGGCGGACCATGATGTGGTAATTTCCAAGGTGCAGGCGATATTGGAGAAGGTCGAGGAACTGAACAAACCAGAAGTGTCGCTGGAGACTGCTTATGAAGTCTTGGCTGATTTGAAGGATTTATACCCCCTAGAGTACGACATGTTCGGTCTAGGAACAATAGCGGGGACCATAGTCAGTCCACTGCTCAGTGCTATGTTGGCCACGTGGGACCCGTTGCAGGCTCCAGAAGAGCCCCTGCCTACGTTTATCAAGTGGAGGAAGCTGCTTACTGACGAGGCGTATAATAGTTTGATCTGGCAGCACTATGTGGAACATATCAATACTGCTTCTGAATCTTGGAACCCCCGCATCCCAGCGCCGATGGTCCGCGCGCTCACGTCGTGGTCGGAGGCGTGTCCGGAGTGGGTGCTGTCGTCCTGTGCGTCGCGATACATCGTGCCGCGCGTGCTCGCCGCCGTGCGCGTGTGGGACCCCACGGGGGACACGCAGCCCCTGCACCAGTGGGTGCTGCCCTGGCATGACATAGCAGCCTCCGTGATGCAGTTGGTTGGATGCCGACTGAGAAATGAGAGGCTGCGGTTGCTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGGCGGCGGCGCTGGCGGGCTGGCACCCGGCGGACGGGTCGGCGCGCGGCGTGCTGGCGGCGTGGCGGCGCGCGTGGGGCGGCGCGCTGCACACCGTGCTGCACCAGCACGTCGTGCCCAAGCTCGAGCACTGCCTGCAGCACGCGCCCGTGCATCTCGTCGGAGGGGATAACACCGCCTGGCAGTGGTGTGTAGAATGGCTGGACTTGCTAGGAGCTCCTACAGTGGCCGCCATCGCGAGTCGAGCCCTACTGCCAAGATGGCTGGCCGCGCTCGCCGCCTGGTTAAACACTAACCCTACCCACGCTACTGTGCTCACGTCTTATACGGAATTTAAGAAACTGTTCCCAGAAGAAGTTCTAAAAGAGCCAGCGGTTCGTGACGCATTCCGCAAAGCCTTAGACATGATGAACCGCAGCACAGACTTAGAAGCTGTCGAACCCCCGCCGCCACCCCGTTTCACCCTCCCAGAGACCAAGGAAACTTCTAGAATTGCCGACGTACTCGCCTCCGTCAGCCAACAGAAGAGTTTCTCAGAGTTACTAGAATCTAGATGCATTGACAAAGGCATTACCTTCGTCCCAATAGCTGGCAAGACAAGGGAAGGCAGACCGCTATACAAGATAGGAGGCATGCAGTGTTATGTAATAAGAAATGTCATTATGTATTCGAATGATGGAGGGAGAAACTTCTCGCCTATTAGTATGGATAAGTTGTTGCAAATGGTTGAGGAATAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEQQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKEIEPAEASTSRPKFAADSSDEDAQEVNPDESDTAGIRKQGQGMRPPNLGGNVGAWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKATQKAKKEEERRLKEKEDQDKDPKEKTYNWKKSHKGRYFYRDAADVIQEGKPTMHTIASSELSRVPVIDMTGKEKRVLSGYHALRAHAPRYEHEPRRKCDNFAAPHLIHNLELMVDCCEQDIIQNARELQQAEDEIVVLERDLEECNIKLADHDVVISKVQAILEKVEELNKPEVSLETAYEVLADLKDLYPLEYDMFGLGTIAGTIVSPLLSAMLATWDPLQAPEEPLPTFIKWRKLLTDEAYNSLIWQHYVEHINTASESWNPRIPAPMVRALTSWSEACPEWVLSSCASRYIVPRVLAAVRVWDPTGDTQPLHQWVLPWHDIAASVMQLVGCRLRNERLRLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAALAGWHPADGSARGVLAAWRRAWGGALHTVLHQHVVPKLEHCLQHAPVHLVGGDNTAWQWCVEWLDLLGAPTVAAIASRALLPRWLAALAAWLNTNPTHATVLTSYTEFKKLFPEEVLKEPAVRDAFRKALDMMNRSTDLEAVEPPPPPRFTLPETKETSRIADVLASVSQQKSFSELLESRCIDKGITFVPIAGKTREGRPLYKIGGMQCYVIRNVIMYSNDGGRNFSPISMDKLLQMVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00290726; iTF_00428140; iTF_01429953; iTF_00819181; iTF_00787669; iTF_01010373; iTF_00341332; iTF_00063608; iTF_00859485;
- 90% Identity
- -
- 80% Identity
- -