Cbil005909.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- sip1
- Assembly
- GCA_036417725.1
- Location
- CM071143.1:9914716-9935065[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-57 2.4e-53 182.0 1.0 2 275 367 622 366 622 0.96 2 2 1.2 7.9e+03 -3.3 0.0 77 270 638 662 627 677 0.44
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAGGTTATTCGTTTCGAGATCACTGACTACGATTTGGACAATGAATTCAATCCAAACAGGAATCGAAGAGCGAAAAAGGAACAGCAGATTTACGGTGTGTGGGCTAAAGACAGTGATGAGGATGATAATGAAGACAATATTAGACAGAGGACGCGGAAACCCAAAGATTTCTCAGCACCAATCGGTTTTGTGGCTGGAGGCGTCCAACAGGCTGgcaagaaaaaagaagaaaaaaaagAAATAGAGCCAGCTGAAGCATCAACATCGCGTCCAAAGTTCGCAGCAGACAGTTCAGATGAGGAGCAACCTGACGAACCAGATGAGACTGAGACCGCAGGCATTAGGCGTCAGGGCCAGGGCATGCGCCCGCCCAACCTTGGTGGCAGTGTTGGCACATGGGAGAGGCACACTAAGGGTATAGGTGCTAAGTTGTTGTTGCAGATGGGATACCAACCTGGTAAAGGTTTGGGTAAGGATCTCCAAGGTATTTCGGCGCCAGTAGAAGCTACCATCAGGAAGGGTAGAGGAGCAATTGGTGCTTATGGACCTGAAAAATCAACACAAAAGGCCAAGAAAGAAGAGGAACGCCGTTTGAAAGAGAAAGAAGATCAAGACAAAGACAAAAAAGAGAAGACCTACAATTGGAAGAAGTCACACAAGGGCCGATACTTCTACAGAGATGCGGCTGACGTCATACAAGAGGGTAAACCCACGATGCATACTATTGCCAGCAGCTCGCTGTCCCAGGTGCCGGTGATCGACATGACGGGCAAGGAGAAGCGCGTGCTGAGCGGGTACTCGGCTCTGCGTGCACACGCCCCGCGGTACGAGCACGAGCCGCGCCGCCGCTGCGACTACTTCGCCGCGCCGCACCTGCTGCACAACCTCGAGCTCATGGTCGACTGCTGCGAACAGGATATAATCCAAAATGCTCGGGACCTACAGCAAGCGGAAGACGAAATAGTGGTACTAGAAAGGGATTTGGAAGAATGTAACATCAAACTGAAAGACCATGATGAAGTGATCTCCAAAGTCGAGGTGATATTGCAGAAGGTCGAGGAACTAAACAAGCCTGATGTCTCACTAGAAACTACTTATGAAGTATTGGCTAACTTGAAGgaaTCATTCCCCCTAGAATACGAGATGTTTGGTCTAGGCACGATAGCGGGAAATATCATCAGTCCGCTATTCAGTGCTATGTTAGCCACGTGGGATCCATTACAAGCGCCCGAAGAGCCGATACCCACATTCCTCAAGTGGAGGAAACTGCTCACAGAAGAGGCGTACAACAGTCTTATATGGCAGCATTATGTACAGCATATTAATAATGCTGCTGAGGTCTGGAATCCCCGTATCCCGGCCCCCATGGTCCGCGCTCTGACATCATGGTCGGAGGCGTGTCCAGACTGGGTGCTGTCGTCATGCGCGTCTCGGTACATCGTGCCTCGAGTACTGTCCGCCGTGAGGGTGTGGGACCCCACGAGTGACGCGCAGCCTCTACACCAGTGGGTGCTACCATGGCATGATATAGCAGgctCGGCGCTCGCGACCGGCGTGTACCCGCTGATCCGGTCGCGGCTGGCGGGCGCGCTGGCGGGCTGGCACCCGGCGGACGCGTCGGCGCGCGGCGTGCTGGGCGCGTGGCGGCGCGCGTGGGGCGGCGCGCTGCTCGCCGTGCTGCACCACCACGTGGCGCCCAAGCTCGAGCACTGTCTGCAGCACGCGCCGGTGCACCTCGTCGGAGGCGACAACActgCATGGCAATGGTGCGTGGACTGGTTGGACCTGCTAGGAGCTCCTACAATAGCGGCCATCGCCAGTAGAGCGTTACTACCGCGATGGCTGGCTGCGTTGGCTGCCTGGCTCAATACAAACCCCACGCACGCGACTGTACTCAACTCTTACACTGATTTTAAGAAAATGTTCCCCGAAGAAGTACTAAAAGAGCCTGCGGTACGAGACGCGTTCCGCAAAGCCCTGGACATGATGAACCGGAGCACCGACTTGGAGGCCGTGGAGCCTCCGCCCCCGCCCCGCTTCACCGTCGACTCCAAGGAAACTTCCAGGATAGCCGAAGTCCTCGCCTCTGCCACCCAGCAGAAGAGCTTCTCAGAGCTACTGGAAACTAGATGCATAGATAAGGGGATTACATTCGTGCCTATAGCCGGCAAGACGAGAGAGGGCCGGCCAATATACAAGATCGGCAGTATGCAGTGCTATGTTATAAGAAATGTTATTATGTACTCCGATGACGGTGGAAGAAACTTCTCGCCTATAAGTATAGATAAGTTGTTGCAGTTAGTTGAGGAATAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRNRRAKKEQQIYGVWAKDSDEDDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKEEKKEIEPAEASTSRPKFAADSSDEEQPDEPDETETAGIRRQGQGMRPPNLGGSVGTWERHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATIRKGRGAIGAYGPEKSTQKAKKEEERRLKEKEDQDKDKKEKTYNWKKSHKGRYFYRDAADVIQEGKPTMHTIASSSLSQVPVIDMTGKEKRVLSGYSALRAHAPRYEHEPRRRCDYFAAPHLLHNLELMVDCCEQDIIQNARDLQQAEDEIVVLERDLEECNIKLKDHDEVISKVEVILQKVEELNKPDVSLETTYEVLANLKESFPLEYEMFGLGTIAGNIISPLFSAMLATWDPLQAPEEPIPTFLKWRKLLTEEAYNSLIWQHYVQHINNAAEVWNPRIPAPMVRALTSWSEACPDWVLSSCASRYIVPRVLSAVRVWDPTSDAQPLHQWVLPWHDIAGSALATGVYPLIRSRLAGALAGWHPADASARGVLGAWRRAWGGALLAVLHHHVAPKLEHCLQHAPVHLVGGDNTAWQWCVDWLDLLGAPTIAAIASRALLPRWLAALAAWLNTNPTHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSTDLEAVEPPPPPRFTVDSKETSRIAEVLASATQQKSFSELLETRCIDKGITFVPIAGKTREGRPIYKIGSMQCYVIRNVIMYSDDGGRNFSPISIDKLLQLVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00429029;
- 90% Identity
- iTF_01429953;
- 80% Identity
- -