Tmes017917.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- ZFX
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000214.1:1022495-1027296[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.6 3.4e+02 3.3 0.1 3 23 14 34 13 34 0.94 2 15 1.1 2.3e+02 3.9 2.6 1 23 890 913 890 913 0.83 3 15 0.00022 0.046 15.5 0.6 2 23 991 1013 990 1013 0.96 4 15 0.014 3 9.8 0.3 2 23 1026 1047 1026 1047 0.98 5 15 1.8e-05 0.0037 19.0 2.3 2 23 1050 1071 1049 1071 0.97 6 15 0.012 2.6 10.0 0.3 1 23 1077 1099 1077 1099 0.95 7 15 2.5e-05 0.0051 18.5 4.5 2 23 1106 1127 1105 1128 0.95 8 15 0.11 23 7.1 3.7 5 23 1141 1159 1140 1159 0.97 9 15 2.2e-05 0.0046 18.7 1.5 3 23 1166 1187 1165 1187 0.97 10 15 0.01 2.1 10.3 0.3 2 23 1203 1223 1202 1223 0.97 11 15 6.7e-05 0.014 17.2 0.7 1 20 1229 1248 1229 1251 0.92 12 15 8.3e-05 0.017 16.9 2.7 1 23 1259 1281 1259 1281 0.99 13 15 0.0023 0.48 12.3 3.2 1 23 1287 1309 1287 1309 0.97 14 15 2.4e-06 0.00049 21.7 3.9 1 23 1315 1337 1315 1337 0.99 15 15 0.0003 0.063 15.1 7.2 1 23 1343 1365 1343 1366 0.96
Sequence Information
- Coding Sequence
- ATGGAACTTGGAACGAGTATGACCGCAGGGGCAGTTGCCTGCCCCGTTTGTACCCTATATTTACGAGAAGGTATAAGCCTGCAAAAGCACTTGGACACTCATCCCAAAGAGCAGGTTATAGAAGCTTTAATAAAGGCTAGTTCATCGCCGGCTCAACCACAACTAAACCTTTCGCAACCGGCTCAAAGTCCCATACAAACACCTCAAACTCCGGTCGCATCACAGTCTCCTTATCCAGTTGGACCTGTGTTCGAATGTCCGCCCGTAGCGTCGATGATGTCGCCTCAATTCGCGTCGTTTAGTTATCAACAATTTGTTAATAACGGAACAATGATGATACCCCAGTACGCTATGGCGCCGCAGGCTAATCAAATGATGCAAATGTTATACAATCCTTACGGCATGTATCAACAACAACAAATACCAGCCGTTCAAATGATCTCGCCAATATCAAATGTGCCAACAGCTCAAAGATCTAGACCCATGGTTTCTGTGGGTAGCGAAACTAACGCAAGAAATAATATCGCCTCTTCTTTAACCGGCGTTGACATTGAACCTAAGCAAATATTACCGGAAATAGAGGCTGACGTTGAGCCTGAACAACTACTACCTGAGGTTGAAATTGAGTCTGTTACAAGCACAAATCAACACGAGACTAATAATCACGAGGATAGAAATCAATCTGAACATCAAACGCAACAGATACAGCAGGAATCTATGAGTCAAGATAATGGCGGTGGAAGAATCGAGTATCAAAATATCGTGCAAAATATGTCCGTTAACGAGGATGGAATCGTTGTTCACGATGATAAGACTGAGAATGAAAGCGTACTGCCGGATATTGAGCAACCCGAAACTACAAACCAAACACAACTTGTACCCATTCAGCATGAGCACACGCAAACTCAACAGGGAGAAGTTTTTGGACACGGATTTGAAGGGAGCGATGGAAAGGATCGAGACACTATATCTGGGAATGACGAAATTGAGGTGGAAGTAGAAGAGGATAATAAGCTTGAAGCCGATAATGAAAATCTACAAAATACTAATTCTAACACTGAAGATAATAATATGGTCGTTGAGAGACCAAAGAATTGTAACGAACAGCCTGAGGTCGAGCAGCTCGAACGACTTTTGATAACAATCATGGAAACGGAATTTAACGTTAATCGTTTGAAAAATAAAGACAAGAAGAGCCAGGAAGGAGAGAGAGACGAAGAACGTAGCGATATTGAAACTTCTGCCGGCGATAGAGAGACGAGCGTTATTCAAGAGACTTCAACGACTAGTATAGATTTCCAGAGAAACAACCTTAAGGTCTTTCAGACTGGAGATATCAGGGAATCGTTCAATTGTAATGATGAGAACGACGACGAAGAGGGAAAGCTGGAGGATTTAGAAACAGGCGAAAGTTATGAACAAGAAAATGACGATGCTCAGTTTGTATATAGTTATAAAAATAGCTTGTCTGCTCCCGCATCACCAGCTACGCAGAGAATATTAAATCGGCAAAGGACTTATTCCGTCCGTTCTGAGATGGGATCTAATGAAAATCTCAGCTCTTATCCAGTCGGATTTGAAGCAACTACGCTGCTAGATGACGAAGACGATGATGTTACAGAAAAACGTGAAACCGTTGATAATTTTGACGAGGAAGATATGGAAATTGAAGAAATCACTAGTCCGCATACTCCGTTTACAAAACATAATGAAAATTCTGAGTGCCCAAGGTCGCATACACCGTTATCAACTATTAGTGGAATATCTGGGCTTAGGGTAAGGACTGATCTCAGCAAACCGTGTTCACCTGCTTCGACTCATTCCTTTCATCATATGGACACTAACAGCCTTTGCGCAGAAGATGACGGAGAGGAACTAGTAGATCCAGAGACTGAAAAAGATCCTATAGATTGTTCTCAGCTACAAAGAGAGGCGGAGTTGTTGGAAAACCTGAAAAATATTTCACACAAATTACAGCCTAATCACGTTTACCATCAGTCTGTGATAACCGAAAATCTTGCCTCGTTTTCTATCGGTCATCATTCGCAAAAAACTATGACTATTCACGAAACTTATGATTCTACGAACTGCCAGCACAATTCTGACAATCTTTTGGACTTATCTGAACCTTCTGAACCAACTACTAGCACAGATTCAAAGAATTTTCAATCCGTTAAATCAATTCTACAAAAACCGACTACTGAATTGTTGAACATCAATGAAGACGCACATCCTGGGCCTATGAACGTACTCGAATTCGATGGACTACAGATTCTTGTTCCCAGTACATTCATAAGCGAATCTTCACAGAAAGCAGTAAGCGCTACTAGCCGACAATCTATGGCAAGCAGCGAGGGCGGGGCAGAGGCTGATGAGGAAATCAAAAGTGTTAATATGAGAGCGGACGAGATCATGCCACCAAGAGGCGAGCTATCCGAGCAGGAGAGTAACGGGTGCCACGAACCTTCCGCCTGGCAGTTGTACATGGGTCAAGAATCATCTCGGATGTCTACATCCTACGATTTAATGGCTCGTGAGAGTTGGGAGGAATCTGAAGGATCGGACAACGAGATAGGAGGCCCTCTTTTGGATAGCCGTTCATTGGCTACACACTTCACTTCCAGTTTATTTCTTGATAGAGATAGAAAGACTCCTACCAAGCGATCCTTCAAGTGTCCTCATTGTTCAGAAATATTTGACTGTCCAAAAGAACGCAGGGTTCATACAGGAACTGTTCACAAAGAAGCAGGACCGAGCAGCAGTAGGGATCCTATGGAACAGCCTGAAGTTAAAGATATAAAGTTATTAGAGGGCAGAATGAACGTCTTCGATGATCTCTTTGTTCCCGGTCTGCACGTGCAACAACCTCTTCTGCATCAGCTACAGCCGGCGCATCACCCACCTGATCTGACAAAATTAGAAGTCGATAGAAAGATTGAAAACTTAATTGTTCCAACGTCGATTGAAATCTCTTGTCCAATTTGCGGGCAGTTGTTTAGTAGCGATAAATCACTGCAGATACATCATAGGAGGGTACATGTTTCAGAGAATAATAAACGCGTGAGGGAGAGCGCCAAGTGTCAAACTTGTAACGAAGAGTTTCCTTCCGTTGTTTTATACAATACACACTTGAAAATTCATCCTTTGGAATGCGGACAATGCGGCAAATACTTCTACAGAAAACAGAACTTCAAATTACACATGAAACGACACCTTGGAATCAAACCTTTTCCTTGCACCGTATGCGACAAAGCCTTCCTAACTAAACAAAAACTGGACGAACACACCAATGGACACACTGGTAACGCCCCAGTAAAGTGTAACTTATGTAACGAGACGTTCAGACGCTACTCTAACTTGACTCAACACAAAAATCGACACCATCTCAACATTAAGAAGAAATTAAAGGACTACATTTGTCATTGCGGCGAAGTATTTCACACCAAAAAGAAATTGGCTTGGCATAAAGAAACTCACGACGAAAAACCTAAGGCTTGCACTTATTGTAACGAAAGGTTTATTCATATGGCTAGTTTAACTAGACACATGAGGAGAGCTCACAATAGAAGATTTGTTCCCGACGCTCAGAGAGAAAATGAAAACGTTGAATGTCCAATCTGCAAATGTATTTATTTACGATCGTCGTTGGCTGTTCATATGCGCGTTCACAATGGCGAGAGACCCTACGAGTGCCAAGTTTGTTCAAAGGCCTTCAGCACAAAATGGAATCTACAGCTGCACAAATGGACTCATGCAGCGCGCAGTACGAAACCTTTTAAATGCAATCAATGTAGCGCTGCGTTTTATCGTCACAGCGACTACACAGCTCATATGAATTCTCATAGGAACGTTCGACCTTATACGTGTAACTATTGCGGGGCGCAATTCATTCGGAAATACAATTGTCTGCGACACGTTAAAGAACACGAAGAGAATAAATCCTACACGTGCGATATTTGCAACAAAACATTTCATCGATCGTATTACCTTAAAGAACATTTACGAGTACATTCGGGAGCCAGACCCTACACTTGTCATATCTGCGGCAAGTCTAGTAGTACCAAGTCAAATCATAATAAACACGTGAGAATTCATCATGCGAGAGAACCTGTAAATACGGAAAACTAA
- Protein Sequence
- MELGTSMTAGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASSSPAQPQLNLSQPAQSPIQTPQTPVASQSPYPVGPVFECPPVASMMSPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPAVQMISPISNVPTAQRSRPMVSVGSETNARNNIASSLTGVDIEPKQILPEIEADVEPEQLLPEVEIESVTSTNQHETNNHEDRNQSEHQTQQIQQESMSQDNGGGRIEYQNIVQNMSVNEDGIVVHDDKTENESVLPDIEQPETTNQTQLVPIQHEHTQTQQGEVFGHGFEGSDGKDRDTISGNDEIEVEVEEDNKLEADNENLQNTNSNTEDNNMVVERPKNCNEQPEVEQLERLLITIMETEFNVNRLKNKDKKSQEGERDEERSDIETSAGDRETSVIQETSTTSIDFQRNNLKVFQTGDIRESFNCNDENDDEEGKLEDLETGESYEQENDDAQFVYSYKNSLSAPASPATQRILNRQRTYSVRSEMGSNENLSSYPVGFEATTLLDDEDDDVTEKRETVDNFDEEDMEIEEITSPHTPFTKHNENSECPRSHTPLSTISGISGLRVRTDLSKPCSPASTHSFHHMDTNSLCAEDDGEELVDPETEKDPIDCSQLQREAELLENLKNISHKLQPNHVYHQSVITENLASFSIGHHSQKTMTIHETYDSTNCQHNSDNLLDLSEPSEPTTSTDSKNFQSVKSILQKPTTELLNINEDAHPGPMNVLEFDGLQILVPSTFISESSQKAVSATSRQSMASSEGGAEADEEIKSVNMRADEIMPPRGELSEQESNGCHEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRSFKCPHCSEIFDCPKERRVHTGTVHKEAGPSSSRDPMEQPEVKDIKLLEGRMNVFDDLFVPGLHVQQPLLHQLQPAHHPPDLTKLEVDRKIENLIVPTSIEISCPICGQLFSSDKSLQIHHRRVHVSENNKRVRESAKCQTCNEEFPSVVLYNTHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939825;
- 90% Identity
- iTF_01303669; iTF_01412629; iTF_01411770; iTF_01414425; iTF_00939825; iTF_00938966;
- 80% Identity
- -