Malb022166.2
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- ZFX
- Assembly
- GCA_949628255.1
- Location
- OX451210.1:15633558-15638378[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.9 2.4e+02 3.3 0.1 3 23 14 34 13 34 0.94 2 15 1.3 1.6e+02 3.9 2.6 1 23 889 912 889 912 0.83 3 15 0.00026 0.032 15.5 0.6 2 23 990 1012 989 1012 0.96 4 15 0.017 2.1 9.8 0.3 2 23 1025 1046 1025 1046 0.98 5 15 2.1e-05 0.0026 19.0 2.3 2 23 1049 1070 1048 1070 0.97 6 15 0.015 1.8 10.0 0.3 1 23 1076 1098 1076 1098 0.95 7 15 2.9e-05 0.0036 18.5 4.5 2 23 1105 1126 1104 1127 0.95 8 15 0.13 16 7.1 3.7 5 23 1140 1158 1139 1158 0.97 9 15 2.6e-05 0.0033 18.7 1.5 3 23 1165 1186 1164 1186 0.97 10 15 0.012 1.5 10.3 0.3 2 23 1202 1222 1201 1222 0.97 11 15 7.8e-05 0.0099 17.2 0.7 1 20 1228 1247 1228 1250 0.92 12 15 9.7e-05 0.012 16.9 2.7 1 23 1258 1280 1258 1280 0.99 13 15 0.0027 0.34 12.3 3.2 1 23 1286 1308 1286 1308 0.97 14 15 2.8e-06 0.00035 21.7 3.9 1 23 1314 1336 1314 1336 0.99 15 15 0.00035 0.045 15.1 7.2 1 23 1342 1364 1342 1365 0.96
Sequence Information
- Coding Sequence
- ATGGAACTTGGAACCAGCATGACTGCAGGGGCAGTTGCCTGCCCCGTTTGTACCCTATATTTACGAGAAGGTATAAGCCTGCAAAAGCATTTGGACACTCATCCCAAAGAGCAGGTAATAGAAGCTTTAATAAAAGCTAGTTCATCTCCGGCTCAACCACAACTAAACCTTTCACAACCGGCTCAAAATCCTTTACAAACACCTCCAAATCCGGTTGCTTCACAGTCTCCCTATCCCGTTGGACCTGTGTTCGAATGTCCTCCTGTAGCGTCAATGATGTCTCCTCAATTTGCCTCGTTTAGCTATCAACAATTTGTTAATAACGGAACGATGATGATACCCCAATATGCCATGGCACCACAGGCTAATCAGATGATGCAAATGTTGTACAATCCTTACGGAATgtatcaacaacaacaaatacCAGCTGTTCAAATGATCGCCCCAATATCCAACGTGCCAACAGCTCAAAGATCTAGACCCATGGTTTCTGTCGGAAGCGAAACTAACACCAGAAATAATATTGCTTCATCTTTAAGCGGTGTTGATATTGAACCTAAGCAAATTTTACCTGAAATAGAGGCCGAAGTTGAGCCGGAACAGCTCTTACCTGAAGTCGAAATTGAGTCGGTGACGGGCACAAATCAACACGAGAGTAATCACGCGGATAGAAATCAATCTGAACATCAAACACAACAGATACAGCAGGAATCTATAAATCAAGAGAATGGCGGCGGTAGAATGGAGTATCAAAACATCGTGCAAAATTTAACAGTTAATGAAGATGGGGTTGTTGTTCACGATGATAAGACTGAGAATGAAAGCGTACTACCAGATATTGAACAACCGGAATCGATAAGCCAGACACAACATGTTGTACCCATTCAGCATGAACATACACAAACACAACAGGGAGAAGAGTTTGGGCATGGATTTGGGGCTAGCATTGGAAAGGAACGAGACATTCAATCTCGGACTGTTGATTTTGAAGAGGAAGTAGAAGAGGATAATAAAGTGGATGGTGagaatgaaaatcttcaaaatacCGTTTCTCATGCAGATATAAACATGGTTGTTGAGAGACCAAAGAATTCTAACGATCAACCTGAGGTGGAGCAACTCGAACGTCTTTTGATAACTATTATGGAGACGGAATTTAATGTCAATCGTCCGAAAAGTAAAGACAAGAAGGGTCAAGAGGACGTAAGAGACGAGGAACGATGCGATATGGAAACTTCTGCCGCTGATAGAGAAACTAGCGTTATTCAAGAGACTTCAACGACAAGTTTGGACTTCCAGAGAAACAGTCTTAAGGTTTTTGAGACTGGAGAGATCAGAGAATCATTTAATAGTAACAAAGACATCGATGAGGAAGAAGGAAAATCGGAAGAATTAGAAGCGGGTGAATGTTATGAACAAGAAACTGATGCCcaatttgtatataattataaaaatagcTTATCTGCTCCGGCTTCACCAGCTACTCAGAGAATTTTAAATCGGCAAAGGACTTATTCGGTTCGTTCTGAAATGGGATCTAATGAAAACCTGAGCTCTTACCCAGTTGGTTTTGAGGCAACTACGCTGTTAgacgaagatgaagaagacgTGAATGAAAAACGTGAGACAGTTGATAATTTCGACGAGGAAGACATGGAGATTGAAGAAATCACAAGTCCACATACTCCATTTACAAAACATAATGAAAACTCTGAGTGTGTCAGATCTCATACACCATTGTCAACCATTAGTGGAATCTCTGGGCTTAGAGTAAGGACTGATCTCAGCAAACCGTGTTCACCTGCATCAGCTCATTCCTTTCATCACATGGACACAAACAGCCTTTGCGCAGAAGATGATGGGGAGGAGCTAGTAGACCCAGATACTGAAAAAGATCCTATAGATTGTTCTCAGCTACAGAGAGAAGCGGAGTTGATTGAAAACCTGAAGAATATATCACATAAATTACAGCCTAATCACGTTTATCATCAGTCTGTTATCACAGAAAATCTTGCCTCGTTTTCTATCAGTCACCATTCTCAAAAACCTATGACTATTCACGATACTTACGAATCTACGAATTGCCAACACAATGGTGACAATCTTTTGGACCTATCTGAACCGTCTGAACCAACTACTAGCACAgattcaaagaattttcaatctGTTAAATCAATTCTACAAAAACCGACTACTGAATTGTTAAATATCAACGAAGACGCACATCCTGGGCCCATGAATGTACTCGAATTTGATGGACTACAGATTCTTGTTCCTAGTACATTCATAAGCGAATCTTCACAGAAAGCGGTCAGTGCTACGAGCCGACAATCAATGGCAAGCAGCGAGGGCGGGGCAGAGGCCGATGAGGAAATCAAAAGCGTTAATATGCGGGCGGACGAGATCATGCCTCCAAGGGGCGAATTGTCAGAGCAGGAGAGTAATGGGTGCCACGAACCTTCTGCCTGGCAGCAGTTGTACATGGGTCAAGAATCATCCCGGATGTCTACATCTTACGATTTAATGGCTCGTGAGAGCTGGGAGGAATCTGAAGGATCGGATAACGAGATAGGTGGCCCTCTTTTGGACAGTCGTTCATTGGCCACACACTTCACTTCAAGCTTATTTCTTGACCGCGATAGAAAGACTCCTACAAAGCGATCGTTCAAGTGTCCTCATTGTTCAGAAATCTTTGATTGTCCGAAGGAACGCAGGGTGCATACGGGCACTGTCCACAAAGAAGCAGGACCAAGCAGCAGTAGGGATCCTATGGAACAGCCGGAAgtaaaagatataaaattattggaaGGACGAATGAACGTGTTCGATGACCTCTTTGTTCCCGGTCTGCATGTCCAACAGCCTCTTTTACATCAATTACAGCCAGCACATCATCCCCCTGATCTGACAAAGTTGGAAGTTGATAggaagattgaaaatttaattgttcCGACATCGATTGAAATCTCTTGTCCAATTTGCGGACAGTTATTTAGTAGCGATAAGTCTCTTCAGATACATCATAGGAGGGTACATATTTCCGAGAGTAATAAACGCGTCAGGGAGAGCGCCAAGTGTCAAACTTGTAACGAAGAATTTCCTTCGGTTGTTTTATATAATACACACTTGAAGATTCATCCCTTGGAATGTGGTCAATGCGGTAAATACTTTTACAGAAAACAAAACTTTAAATTGCACATGAAACGACACCTTGGAATAAAGCCTTTTCCTTGCACTGTATGCGACAAAGCTTTTCTTACCAAACAAAAACTGGACGAGCATACAAATGGACACACTGGTAACGCCCCAGTCAAGTGTAACTTATGTAACGAGACGTTCAGACGTTATTCTAACTTGACTCAACACAAAAATCGACATCATCTAAACATTAAGAAGAAATTAAAGGACTACATTTGTCATTGCGGTGAAGTATTTCATACTAAGAAGAAACTTGCTTGGCATAAAGAAACTCACGATGAAAAACCTAAGGCTTGCACTTATTGTAATGAGAGGTTTATTCACATGGCCAGTTTAACTAGACACATGCGAAGAGCTCATAATAGAAGATTTGTTCCCGACGCTcaaagagaaaacgaaaatgttGAGTGTCCAATTTgcaaatgtatttatttacgCTCATCGTTGGCTGTTCACATGCGAGTTCACAACGGTGAGAGACCCTACGAGTGTCAAGTTTGTTCAAAGGCCTTCAGCACAAAATGGAATCTACAGCTGCACAAATGGACTCATGCAGCGCGCAGTACGAAACCTTTTAAATGCAATCAATGTAGCGCTGCATTTTATCGTCACAGTGACTACACAGCTCATATGAATTCTCATCGGAACGTTCGACCTTACACGTGTAACTACTGTGGGGCACAATTCATTCGTAAATACAACTGTCTGCGGCACGTCAAAGAACACGAAGAGAATAAGTCCTACACATGCGATATTTGCAACAAAACATTTCATCGATCGTATTACCTTAAAGAACATTTGCGAGTACATTCGGGTGCCAGACCCTACACTTGTCATATCTGTGGCAAGTCTAGTAGTACGAAGTCGAATCATAATAAACACGTAAGAATTCATCATGCGAGAGAACCTGTAAATACGGAAAACTAA
- Protein Sequence
- MELGTSMTAGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASSSPAQPQLNLSQPAQNPLQTPPNPVASQSPYPVGPVFECPPVASMMSPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPAVQMIAPISNVPTAQRSRPMVSVGSETNTRNNIASSLSGVDIEPKQILPEIEAEVEPEQLLPEVEIESVTGTNQHESNHADRNQSEHQTQQIQQESINQENGGGRMEYQNIVQNLTVNEDGVVVHDDKTENESVLPDIEQPESISQTQHVVPIQHEHTQTQQGEEFGHGFGASIGKERDIQSRTVDFEEEVEEDNKVDGENENLQNTVSHADINMVVERPKNSNDQPEVEQLERLLITIMETEFNVNRPKSKDKKGQEDVRDEERCDMETSAADRETSVIQETSTTSLDFQRNSLKVFETGEIRESFNSNKDIDEEEGKSEELEAGECYEQETDAQFVYNYKNSLSAPASPATQRILNRQRTYSVRSEMGSNENLSSYPVGFEATTLLDEDEEDVNEKRETVDNFDEEDMEIEEITSPHTPFTKHNENSECVRSHTPLSTISGISGLRVRTDLSKPCSPASAHSFHHMDTNSLCAEDDGEELVDPDTEKDPIDCSQLQREAELIENLKNISHKLQPNHVYHQSVITENLASFSISHHSQKPMTIHDTYESTNCQHNGDNLLDLSEPSEPTTSTDSKNFQSVKSILQKPTTELLNINEDAHPGPMNVLEFDGLQILVPSTFISESSQKAVSATSRQSMASSEGGAEADEEIKSVNMRADEIMPPRGELSEQESNGCHEPSAWQQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRSFKCPHCSEIFDCPKERRVHTGTVHKEAGPSSSRDPMEQPEVKDIKLLEGRMNVFDDLFVPGLHVQQPLLHQLQPAHHPPDLTKLEVDRKIENLIVPTSIEISCPICGQLFSSDKSLQIHHRRVHISESNKRVRESAKCQTCNEEFPSVVLYNTHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939825;
- 90% Identity
- iTF_01413635;
- 80% Identity
- -