Tdis001850.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- -
- Assembly
- GCA_947538915.1
- Location
- OX384536.1:14514926-14519699[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.5 2.1e+02 3.5 0.1 3 23 14 34 13 34 0.94 2 11 1 1.4e+02 4.0 2.6 1 23 887 910 887 910 0.84 3 11 0.0002 0.028 15.7 0.6 2 23 988 1010 987 1010 0.96 4 11 0.013 1.8 10.0 0.3 2 23 1023 1044 1023 1044 0.98 5 11 1.6e-05 0.0022 19.1 2.3 2 23 1047 1068 1046 1068 0.97 6 11 0.011 1.6 10.1 0.3 1 23 1074 1096 1074 1096 0.95 7 11 2.3e-05 0.0031 18.7 4.5 2 23 1103 1124 1102 1125 0.95 8 11 0.1 14 7.2 3.7 5 23 1138 1156 1137 1156 0.97 9 11 2e-05 0.0028 18.8 1.5 3 23 1163 1184 1162 1184 0.97 10 11 0.0093 1.3 10.4 0.3 2 23 1200 1220 1199 1220 0.97 11 11 0.00028 0.038 15.2 7.2 1 23 1233 1255 1233 1256 0.96
Sequence Information
- Coding Sequence
- ATGGAACTTGGAACCAGTATGACCGCAGGGGCAGTTGCCTGCCCCGTTTGTACCCTATATTTACGAGAAGGTATAAGCCTGCAAAAGCACTTGGACACTCATCCCAAAGAGCAGGTAATAGAAGCTTTAATAAAAGCTAGTTCATCTCCGGCTCAACCACAGCTTAACCTTTCACAACCGGCTCAAAATCCCATACAAACACCGCCGAATCCGGTCGCTTCACAGTCTCCTTATCCTGTTGGACCTGTGTTCGAATGTCCGCCCGTAGCGTCGATGATGTCTCCTCAATTTGCTTCATTTAGTTATCAGCAGTTTGTTAATAACGGAACGATGATGATACCACAGTACGCTATGGCGCCGCAGGCTAATCAGATGATGCAAATGTTGTATAATCCGTACGGCATGTATCAACAACAACAAATACCAGCAGTTCAAATGATCTCGCCTATATCCAACGTGCCAACAGCTCAAAGATCTAGACCCATGGTTTCTGTGGGGAGTGAAACTAATGGCAGAAATAATATCGCTTCTTCTTTAAGCGGCGTTGATATAGAACCTAAGCAAATTTTACCGGAAATAGAGGCGGATGTAGAGCCCGAACAACTCTTACCTGAAGTTGAAATTGAGTCTGGGACTAGCACAAATCAACACGAGAGTAATCATGAAGATAGAAATCAATCGGAACATCAAACGCAACAGATACAGCAGGAATCTATGAATCAAGAGAACGGCGGCGGTAGAATGGAGTATCAAAACATCGTGCAAAATTTATCTGTTAACGAGGATGGGATTGTTGTTCATGATGATAAGACTGAGAATGAGAGCGTACTACCAGATATTGAGCAACCGGAATCTACAAACCAGACACAACTTGTACCCATTCAGCATGAACACACGCAAACTCAACAGGGAGAAGTCTTTGGGCATGGATTTGAGGACAGCGTTGGAAAGGAACGAGACACTCTATCTGGGACTGTTGATATTGAGGTGGAAGTAGAAGAGGATAATAAGCTTGATACCGAGAATGAAAATCTACAAAATACGACTTCTAATACGGAAGAAAGCATGGTTGTTGAGAGACCAAAGAATTGTAATGAACAGCCTGAGGTCGAGCAGCTCGAACGACTTTTGATAACTATTATGGAGACGGAATTTAACGTCAATCGTTTGAAAAATAAAGACAAAAAGAGCCAGGATGGAGAGAGAGAGGAAGAACGATGCGATATTGAAACTTCTGCCAGTGATAGAGAGACGAGTGTTATTCAAGAGACTTCAACGACAAGCTTGGAATTCCAGAGAAGTAGCCTTAAGGTCTTTCAGACTGGAGAAATCAGGGAATCATTCGATTGTAACAATGACAACGACGAGGAAGAGGGGAAGTTAGAGGATTCAGAAGCAACCGAAAGTTATGAACAAGAAAATGATGCTCAGTTTGTATATAGTTATAAAAATAGCTTGTCTGCTCCGGCTTCACCAGCTACGCAGAGAATATTAAATCGGCAAAGGACTTATTCCGTCCGTTCTGAAATGGGATCTAATGAAAATCTGAGCTGTTATCCAGTTGGGTTTGAGGCAACTACGCTGCTAGATGAAGAGGACGAAGATGTTACTGAAAAACGTGAGACCGTTGATAATTTTGACGAAGAAGATATGGAGATCGAAGAGATCACAAGTCCGCATACTCCGTTTACGAAACATAATGAAAACTCCGAGTGCGTAAGGTCTCATACACCGTTGTCAACTATTAGTGGAATCTCTGGGCTTAGAGTAAGGACTGATCTCAGCAAACCGTGTTCACCTGCATCGACTCATTCCTTTCATCACATGGACACGAACAGCCTTTGCGCAGAAGATGATGGGGAGGAGCTAGTAGATCCAGAGACTGAAAAAGATCCTATTGATTGTTCTCAGCTACAGAGAGAAGCGGAGTTAATGGAAAACCTGAAGAATATTTCTCACAAATTACAGCCTAATCACGTTTACCATCAGTCCGTGATAACCGAAAATCTTGCCTCCTTTTCTATCGGTCATCATTCTCAAAAATCTATGACTATACACGAAACCTACGAATCTACGAATTGCCAGCACAATTCTGACAATCTTTTGGACTTATCTGAACCTTCTGAACCAACAACTAGCACAGATTCGAAGAATTTCCAATCCGTTAAATCAATTCTACAAAAACCGACTACTGAATTGTTGAATATCAACGAAGACGCACATCCTGGGCCTATGAACGTACTCGAATTCGATGGACTACAGATTCTTGTTCCCAGTACATTCATAAGCGAATCTTCTCAGAAAGCAGTCAGCGCTACTAGTCGACAATCGATGGCAAGCAGTGAGGGTGGTGCAGAAGCTGATGAGGAAATCAAAAGTGTTAATATGAGGGCGGATGAGATTATGCCACCAAGAGGCGAACTATCCGAGCAGGAGAGTAATGGGTGCCATGAACCTTCCGCCTGGCAGTTGTACATGGGTCAAGAATCATCTCGGATGTCTACATCTTACGATTTAATGGCTCGTGAGAGTTGGGAGGAATCTGAAGGATCAGACAACGAAATAGGAGGCCCTCTTTTGGATAGCCGTTCATTGGCTACACACTTCACTTCCAGTTTATTTCTTGACAGAGATAGAAAGACTCCTACTAAGCGATCCTTCAAGTGTCCTCATTGTTCAGAAATCTTTGACTGTCCAAAGGAACGCAGGGTGCATACAGGGACTGTCCACAAAGAAGCTGGACCAAGCAGCAGTAGGGATCCTATGGAACAGCCTGAAGTAAAAGATATAAAGTTACTGGAAGGACGAATGAACGTGTTCGATGACCTCTTTGTTCCCGGCCTGCACGTGCAACAACCTCTTTTGCATCAGCTACAGCCGGCGCATCACCCACCTGACCTGACAAAGTTAGAAGTCGATAGGAAGATTGAAAACTTAATTGTTCCAACGTCGATTGAAATCTCTTGTCCAATTTGCGGGCAGTTATTTAGTAGCGATAAATCACTGCAGATACATCATAGGAGGGTACATGTTTCAGAGAGTAATAAACGCGTGAGGGAAAGCGCCAAGTGTCAAACTTGTAACGAAGAGTTTCCTTCCGTTGTTTTGTACAATACACACTTAAAGATTCATCCCTTGGAATGTGGACAATGCGGTAAATACTTCTATAGAAAACAGAACTTCAAATTGCACATGAAACGACACCTTGGAATCaagccttttccttgcaccgtatgcgacaaagccttcctaactaaacaaaaactagacgaacacaccaacggacacacTGGTAACGCCCCAGTCAAGTGTAACTTATGTAACGAGACATTTAGACGCTACTCTAACTTGACTCAACACAAAAATCGACACCATCTGAACATTAAGAAGAAATTAAAGGATTACATTTGTCATTGCGGCGAAGTATTTCATACTAAAAAGAAATTGGCTTGGCATAAAGAAACTCACGATGAAAAACCTAAGGCTTGCACTTACTGTAATGAAAGGTTTATTCACATGGCTAGTTTAACTAGACACATGAGGAGAGCTCATAATAGAAGATTTGTTCCCGACGCTCAGAGAGAAAACGAAAACGTTGAGTGTCCAATCTGCAAATGTATTTATTTACGCTCGTCGTTAGCTgttcatatgcgggttcacaacgaacatttgcgagtacattcgggagctagaccctacacttgtcatatctgcggcaagtctagtagtaccaaatcgaatcataataaacacgtgAGAATTCATCATGCGAGGGAACCTGTAAATACGGAAAACTAA
- Protein Sequence
- MELGTSMTAGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASSSPAQPQLNLSQPAQNPIQTPPNPVASQSPYPVGPVFECPPVASMMSPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPAVQMISPISNVPTAQRSRPMVSVGSETNGRNNIASSLSGVDIEPKQILPEIEADVEPEQLLPEVEIESGTSTNQHESNHEDRNQSEHQTQQIQQESMNQENGGGRMEYQNIVQNLSVNEDGIVVHDDKTENESVLPDIEQPESTNQTQLVPIQHEHTQTQQGEVFGHGFEDSVGKERDTLSGTVDIEVEVEEDNKLDTENENLQNTTSNTEESMVVERPKNCNEQPEVEQLERLLITIMETEFNVNRLKNKDKKSQDGEREEERCDIETSASDRETSVIQETSTTSLEFQRSSLKVFQTGEIRESFDCNNDNDEEEGKLEDSEATESYEQENDAQFVYSYKNSLSAPASPATQRILNRQRTYSVRSEMGSNENLSCYPVGFEATTLLDEEDEDVTEKRETVDNFDEEDMEIEEITSPHTPFTKHNENSECVRSHTPLSTISGISGLRVRTDLSKPCSPASTHSFHHMDTNSLCAEDDGEELVDPETEKDPIDCSQLQREAELMENLKNISHKLQPNHVYHQSVITENLASFSIGHHSQKSMTIHETYESTNCQHNSDNLLDLSEPSEPTTSTDSKNFQSVKSILQKPTTELLNINEDAHPGPMNVLEFDGLQILVPSTFISESSQKAVSATSRQSMASSEGGAEADEEIKSVNMRADEIMPPRGELSEQESNGCHEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRSFKCPHCSEIFDCPKERRVHTGTVHKEAGPSSSRDPMEQPEVKDIKLLEGRMNVFDDLFVPGLHVQQPLLHQLQPAHHPPDLTKLEVDRKIENLIVPTSIEISCPICGQLFSSDKSLQIHHRRVHVSESNKRVRESAKCQTCNEEFPSVVLYNTHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939825;
- 90% Identity
- iTF_01413635;
- 80% Identity
- -