Basic Information

Gene Symbol
ZFX_1
Assembly
GCA_963978835.1
Location
OZ022234.1:8840518-8845352[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.8 2.3e+02 3.3 0.1 3 23 14 34 13 34 0.94
2 15 1.2 1.5e+02 3.9 2.6 1 23 886 909 886 909 0.83
3 15 0.00024 0.03 15.5 0.6 2 23 987 1009 986 1009 0.96
4 15 0.016 2 9.8 0.3 2 23 1022 1043 1022 1043 0.98
5 15 2e-05 0.0024 19.0 2.3 2 23 1046 1067 1045 1067 0.97
6 15 0.014 1.7 10.0 0.3 1 23 1073 1095 1073 1095 0.95
7 15 2.7e-05 0.0034 18.5 4.5 2 23 1102 1123 1101 1124 0.95
8 15 0.12 15 7.1 3.7 5 23 1137 1155 1136 1155 0.97
9 15 2.4e-05 0.003 18.7 1.5 3 23 1162 1183 1161 1183 0.97
10 15 0.011 1.4 10.3 0.3 2 23 1199 1219 1198 1219 0.97
11 15 7.4e-05 0.0092 17.2 0.7 1 20 1225 1244 1225 1247 0.92
12 15 9.1e-05 0.011 16.9 2.7 1 23 1255 1277 1255 1277 0.99
13 15 0.0026 0.32 12.3 3.2 1 23 1283 1305 1283 1305 0.97
14 15 2.6e-06 0.00032 21.7 3.9 1 23 1311 1333 1311 1333 0.99
15 15 0.00033 0.041 15.1 7.2 1 23 1339 1361 1339 1362 0.96

Sequence Information

Coding Sequence
ATGGAACTTGGAACAAGTATGATCACAGGGGCAGTTGCCTGCCCCGTTTGTACCCTGTATTTACGAGAAGGTATAAGCCTGCAAAAGCACTTGGACACTCATCCCAAAGAGCAGGTAATAGAAGCTTTAATAAAGGCTAGTTCATCTCCGGCTCCAACACAACTTAACCTTTCACAACCGGCTCAAAGTCCCATACAAACACCTCAAACTCCGGTCGCTTCACAGTCTCCTTATCCCGTCGGACCTGTGTTCGAATGTCCGCCCGTAGCGTCAATGATGTCTCCTCAATTCGCCTCGTTTAGTTATCAGCAATTTGTTAATAACGGAACGATGATGATACCGCAGTACGCTATGGCGCCGCAGGCTAATCAGATGATGCAAATGCTCTATAATCCTTATGGCATGtatcaacaacaacaaatacCAGCAGTTCAAATGATCTCGCCTATATCCAACGTGCCAACAGCTCAAAGATCTAGACCCATGGTTTCTGTGGGGAGCGAAACTAACGCTAGAAATAATATCGCTTCTTTAAGCGGCGTTGACATAGAACCTAAGCAAATATTACCGGAAATAGAGGCGGACGTAGAGTCGGAACAGCTCCTACCTGAGGTTGAAATTGAGTCTGTTACGAACACAAATCAACATGAGAGTAATCACGAGGATAGAAATCAATCGGAACATCAAACGCAACAGATACAGCAGGAGTCTATGAATCAAGATAATGGCGGCGGCCGAATGGAGTATCAAAACATCGTGCAAAATTTGTCCGTTAATGAGGATGGAATCGTTGTTCACGATGATAAGACTGAGAATGAAAGCGTACTGCCGGATATTGAGCAGCCGGAATCTACAGACCAAACACAACTTGTACCCATTCAGCATGAACACACGCAAACTCAACAGGGAGAAGTCTTTGGACATGGATTCGAGCGCAGCGATGGAAAGGACAGAGAAACTATATCTGGGAGTGACGATATTGAGGTGGAAGTTGAAGAGGATAATAAGCTTGATACAGATAATGAAAATCTACACAATACTACTTCTAACACGGAAGTAAATATGGTTGTTGAGAGACCAAAGAATTGTAACGAACAGCCTGAGGTCGAGCAGCTTGAACGACTTTTGATAACTATTATGGAGACGGAATTTAACGttaatcgtttgaaaaataaagacaaGAAGAGCCaggagggagagagagaggaagaacGATGCGATATTGAAACTTCTCCCGTTGATAGAGAGACGAGTGTTATTCAAGAGACTTCAACGACAAGCTTGGACTTCCAGAGAAGCAGCCTTAAAGTCTTTCAGACTGGAGAAATCAGGGAATCGTTCGATTGTAATAATGACAACGACGAGGAAGAGGGGAAATTGGAGGATTTAGAAACAGTCGAAAGTTATGAACAAGAAAATGATGCTCAGTttgtatatagttataaaaaTAGCTTATCTGCTCCGGCCTCACCAGCTACGCAGAGAATATTAAATCGGCAAAGGACTTATTCCGTCCGTTCTGAAATGGGATCTAATGAAAATCTGAGCTCTTATCCAGTCGGGTTTGAGGCAACTACGCTTCTAgatgaagaagatgaagatgtTACCGAAAAACGTGAGACCGTTGATAATTTTGATGAAGAAGATATGGAGATTGAAGAAATCACAAGTCCGCATACTCCGTTTACAAAACATAATGAAAATTCTGAGTGCCCAAGGTCTCATACGCCGTTGTCAACTATTAGTGGAATCTCTGGGCTTCGGGTAAGGACTGATCTCAGCAAACCGTGTTCACCTGCTTCGACTCATTCCTTTCATCACATGGACACTAACAGCCTTTGCGCAGAAGATGATGGGGAGGAACTAGTAGATCCAGAGACTGAAAAAGATCCTATTGATTGTTCTCAGCTACAGAGAGAAGCAGAGTTAATGGAAAacctgaaaaatatttcacacaAATTACAGCCTAATCACGTTTACCATCAGTCTGTGATAACCGAAAATCTTGCCTCTTTTTCTATCGGTCATCATTCTCAAAAACCTATGACTATACACGGAACTTACGAATCTACGAACTGCCAGCACAATTCTGACAATCTTTTGGACTTATCTGAACCTTCTGAGCCAACTACCAGCACAGATTCGAAGAATTTCCAATCCGTTAAATCGATTCTACAGAAACCAACCACTGAATTGTTGAATATCAACGAAGACGCACATCCTGGGCCTATGAACGTACTCGAATTTGATGGACTACAGATTCTTGTTCCCAGTACATTCATAAGCGAATCTTCACAGAAAGCAGTCAGCGCTACAAGTCGACAATCAATGGCAAGCAGCGAGGGCGGGGCAGAGGCTGACGAGGAAATCAAAAGTGTTAATATGAGGGCGGACGAAATCATGCCACCAAGAGGTGAACTATCCGAGCAGGAGAGTAACGGGTGCCACGAACCTTCCGCCTGGCAGTTGTACATGGGTCAAGAATCATCTCGGATGTCTACATCCTACGATTTAATGGCTCGTGAGAGCTGGGAGGAATCTGAAGGATCGGATAACGAGATAGGAGGCCCTCTTTTGGATAGCCGTTCATTGGCTACACACTTCACTTCCAGTTTATTTCTTGACAGAGATAGAAAGACTCCTACTAAGCGATCCTTTAAGTGTCCTCATTGTTCAGAAATATTTGACTGTCCAAAAGAACGCAGGGTACATACAGGGACTGTCCACAAAGAAGCAGGACCAAGCAGCAGTAGGGATCCTATGGAACAGCCTGAAGTAAAAGATATAAAGTTACTAGAGGGACGAATGAATGTGTTCGATGACCTCTTTGTTCCCGGCCTGCACGTGCAACAACCTCTTCTGCATCAGCTACAGCCGGCGCATCACTCACCTGATCTGACAAAGTTGGAAGTCGATAGGAAGATTGAAAACTTGATTGTTCCAACGTCGATTGAAATCTCTTGTCCGATTTGCGGGCAGTTATTTAGTAGCGATAAATCACTGCAGATACATCATAGGAGGGTACATGTTTCAGAGAGTAATAAACGTGTCAGGGAGAGCGCCAAGTGTCAAACTTGTAACGAAGAGTTTCCTTCTGTTGTTTTATACAATACACACTTGAAGATTCATCCATTAGAATGTGGACAATGCGGTAAATACTTCTACAGAAAACAGAACTTCAAATTACACATGAAACGACACCTTGGAATCAAGCCTTTTCCTTGCACTGTATGCGACAAAGCCTTCCTAACTAAACAAAAACTGGATGAACACACCAACGGACACACTGGCAATGCCCCAGTCAAGTGTAACTTATGTAACGAGACATTTAGACGCTACTCTAACTTGACTCAACACAAAAATCGACATCATCTAAACATTAAGAAGAAATTAAAGGATTACATTTGTCATTGCGGCGAAGTATTTCACACTAAAAAGAAATTGGCTTGGCATAAAGAAACTCATGATGAAAAACCTAAGGCTTGCACTTATTGTAACGAAAGGTTTATTCACATGGCTAGTTTAACTAGACACATGAGGAGAGCACATAATAGAAGATTTGTTCCCGACGCTCAgagagaaaacgaaaacgtTGAGTGTCCAATCTGcaaatgtatttatttacgCTCGTCGTTGGCTGTTCACATGCGGGTTCACAATGGTGAGAGACCCTACGAGTGCCAAGTTTGTTCGAAGGCCTTCAGCACAAAATGGAATCTACAGCTGCACAAATGGACTCATGCAGCGCGCAGTACGAAACCTTTTAAATGCAATCAATGTAGCGCTGCGTTTTATCGTCACAGCGACTACACAGCTCATATGAATTCTCATAGGAACGTTCGACCTTATACGTGTAACTACTGCGGGGCACAATTCATTCGGAAATACAACTGTTTGCGGCATGTTAAAGAACACGAAGAGAATAAATCCTACACGTGCGATATTTGCAACAAAACATTTCATCGATCGTATTACCTTAAAGAACATTTACGAGTACATTCAGGAGCCAGACCCTACACTTGTCATATCTGCGGCAAGTCTAGTAGTACCAAGTCAAATCATAATAAACACGTGAGAATTCATCATGCGAGAGAACCTGTAAATACGGAAAACTAA
Protein Sequence
MELGTSMITGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIKASSSPAPTQLNLSQPAQSPIQTPQTPVASQSPYPVGPVFECPPVASMMSPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPAVQMISPISNVPTAQRSRPMVSVGSETNARNNIASLSGVDIEPKQILPEIEADVESEQLLPEVEIESVTNTNQHESNHEDRNQSEHQTQQIQQESMNQDNGGGRMEYQNIVQNLSVNEDGIVVHDDKTENESVLPDIEQPESTDQTQLVPIQHEHTQTQQGEVFGHGFERSDGKDRETISGSDDIEVEVEEDNKLDTDNENLHNTTSNTEVNMVVERPKNCNEQPEVEQLERLLITIMETEFNVNRLKNKDKKSQEGEREEERCDIETSPVDRETSVIQETSTTSLDFQRSSLKVFQTGEIRESFDCNNDNDEEEGKLEDLETVESYEQENDAQFVYSYKNSLSAPASPATQRILNRQRTYSVRSEMGSNENLSSYPVGFEATTLLDEEDEDVTEKRETVDNFDEEDMEIEEITSPHTPFTKHNENSECPRSHTPLSTISGISGLRVRTDLSKPCSPASTHSFHHMDTNSLCAEDDGEELVDPETEKDPIDCSQLQREAELMENLKNISHKLQPNHVYHQSVITENLASFSIGHHSQKPMTIHGTYESTNCQHNSDNLLDLSEPSEPTTSTDSKNFQSVKSILQKPTTELLNINEDAHPGPMNVLEFDGLQILVPSTFISESSQKAVSATSRQSMASSEGGAEADEEIKSVNMRADEIMPPRGELSEQESNGCHEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRSFKCPHCSEIFDCPKERRVHTGTVHKEAGPSSSRDPMEQPEVKDIKLLEGRMNVFDDLFVPGLHVQQPLLHQLQPAHHSPDLTKLEVDRKIENLIVPTSIEISCPICGQLFSSDKSLQIHHRRVHVSESNKRVRESAKCQTCNEEFPSVVLYNTHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00939825;
90% Identity
iTF_01413635;
80% Identity
-