Ssin001113.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- dmd-4
- Assembly
- GCA_954870665.1
- Location
- OX940877.1:20661353-20676700[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-24 1e-20 74.5 13.2 1 47 15 61 15 61 0.98 2 2 0.36 3.7e+03 -0.9 0.1 23 32 228 237 220 242 0.79
Sequence Information
- Coding Sequence
- atgtcCGTGAAAAGTGGATCTAATCTGAAAATGTTGAATCCTCGGGTTCCTAAATGCGCGAGGTGTCGAAATCATGGTGTTATCTCTGGATTACGTGGACACAAAAAACATTGCTCGTACCGAAATTGCAGATGTGCAAAGTGCGAATTGATTCACGAACGGCAAAGGATAATGGCTGCGCAAGTTGCCTTGAAAAGACAACAAGCTGTTGAAGATGCTATTGCCCTTCGTCTGGCCTCCAAGGAAACTGGCACAGCGCTTGAAGCACTTCCACCTGGTAAAATTTTTGGTATGACTGTAACGGAAGCATGTAATACTCCGCCACCATCTTCACCGGCAACATCCgaaaaagaatcaatcaaatcaagTCCATCAACCTCATCACCACCGACCACAGTTGTATCGCAAACAGCAATTGACATGTTGGCGCAATTGTTTCCGCATCGAAAACGTTCCGTTCTCGAGCTGGTCCTGAAACGTTGCGATCTCGACCTTCTTCGCGCCATTGAACAATGTGGTCCACAGCCTAGCGCTTTTCGACCACCAGCGTCGCAGATAATGAATTCGCCGCAATCAGTACCCAACGCCCAACAACATTACGCGCCATTGATTGCATATCCCAAATGGTTGCTTCCGATGTCGATTCCAGTTACAATGGGTCATTTACCAAATTTAGCACCACGATGCACCCTCCCAAATTGTCCCTGCATGGATAGTTACCACATAAACTGA
- Protein Sequence
- MSVKSGSNLKMLNPRVPKCARCRNHGVISGLRGHKKHCSYRNCRCAKCELIHERQRIMAAQVALKRQQAVEDAIALRLASKETGTALEALPPGKIFGMTVTEACNTPPPSSPATSEKESIKSSPSTSSPPTTVVSQTAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCGPQPSAFRPPASQIMNSPQSVPNAQQHYAPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCPCMDSYHIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937324; iTF_01256431; iTF_01183864; iTF_01127437; iTF_01430871; iTF_00877112; iTF_01043802; iTF_00793540; iTF_00322522; iTF_00334108; iTF_00176416;
- 90% Identity
- -
- 80% Identity
- -