Pcoq011418.1
Basic Information
- Insect
- Proctacanthus coquilletti
- Gene Symbol
- dmd-4
- Assembly
- GCA_001932985.1
- Location
- MNCL01000017.1:1824947-1829175[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-25 5.3e-21 74.8 12.9 1 47 50 96 50 96 0.98 2 2 0.66 4.4e+03 -1.8 0.3 23 32 272 281 267 284 0.78
Sequence Information
- Coding Sequence
- ATGATTCCATCCAGATTACCTGGTACGGTCGGCGATAATAGTTGCAACAATAGTAAGCGCATTAATAGTGCCATTGCTGGAAACAAGTGTCTGGATATTGAGACCGCGACCATGGGTAAAAGTGACGGGTTGAAGGGTCTGAACCCACGCGTACCAAAGTGTGCTCGGTGTCGCAATCATGGTGTCATTTCGGGTCTTAGAGGACACAAAAAACACTGTACGTATCGAAATTGTAGGTGTCCCAAATGTGAGCTGATCCATGAAAGACAAAGGATTATGGCTGCTCAggtGGCTCTCAAGAGACAGCAAGCCGTTGAAGACGCCATAGCCCTTCGTCTAGCCTCAAATGAAACCGGAACTGAGCTTGAGGCGCTACCGCCTGGGAAAATCTTCGGGATGAACGTGACGGAGCCGTGCAACACTCCCCCGCCGCCCCCAGCCGCTTCGTCACCAGCGGTATCCGACAAAGATTCCATTAAATCAAGCTCGTCGACGTCCTCCTCGACAATGGTTTCCCAGAGCGCCATCGACATGCTCGCCCAGCTCTTCCCACACCGCAAACGGTCCGTTCTAGAGCTGGTCCTCAAGCGATGCGATCTCGATCTGCTCCGGGCCATCGAGCAGTGCGGAACGCAGCCGAGTGCTTTTAGACCACCAACAATGCAGGCCACTccgccgccaccgccgccTCCACCAACGACGAGCCAGCCTCCGCCACCACAGCCGCACTACGCCCCCCTGATCGCCTATCCCAAATGGTTGCTTCCAATGTCGATCCCCGTGACCATGGGACACCTGCCCAACCTGGCTCCGAGGTGCACCTTGCCGAATTGCCCCTGCATGGATGCATATCACTTCaactaa
- Protein Sequence
- MIPSRLPGTVGDNSCNNSKRINSAIAGNKCLDIETATMGKSDGLKGLNPRVPKCARCRNHGVISGLRGHKKHCTYRNCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNETGTELEALPPGKIFGMNVTEPCNTPPPPPAASSPAVSDKDSIKSSSSTSSSTMVSQSAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCGTQPSAFRPPTMQATPPPPPPPPTTSQPPPPQPHYAPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCPCMDAYHFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375856;
- 90% Identity
- iTF_00937324;
- 80% Identity
- -