Cfor001642.1
Basic Information
- Insect
- Chloromyia formosa
- Gene Symbol
- dmd-4
- Assembly
- GCA_964017055.1
- Location
- OZ024813.1:29954095-29967996[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-24 1.2e-20 74.3 12.5 1 47 15 61 15 61 0.98 2 2 0.51 5.4e+03 -1.4 0.2 23 32 237 246 230 249 0.80
Sequence Information
- Coding Sequence
- ATGTCAGTGAAAAATAATTCGAGCCTGAAATTGTTGAATCCGCGAATTCCGAAATGTGCGAGATGTCGAAATCATGGCGTGATCTCTGGCCTAAGAGGGCATAAGAAACACTGCGCCTATCGCAATTGTCGGTGTCCAAAATGCGAATTGATTCACGAGCGACAAAGGATAATGGCTGCACAGGTAGCTCTCAAACGACAACAAGCTGTCGAAGATGCCATAGCCCTACGTCTTGCCTCCAAAGAGACCGGAACATCGCTCGACACACTTCCGCCTGGCAAGATTTTCGGTATGACCGTGACCGAACCGTGCACCACACCACCACCTCCATCGCCGACAACTTCCGACAAAGAATCGATCAAATCAAgcCCGTCAAACACCGCGTCCTCATCATcggcgtcatcatcatcgtccaaCATGGTTGTATCGCAAACGGCTATTGACATGTTGGCACAATTGTTTCCGCATCGAAAGCGTTCCGTTCTGGAGCTCGTCCTTAAACGTTGCGATCTCGATCTTTTGCGTGCAATCGAGCAATGTGGTCCACAGCCAAGCGCTTTTCGACCACCCGCGACGCAGATGATCAGCGCACCTTCAACACAAACGTCGCCTGCACAACAACACTACGCACCCCTAATTGCCTACCCCAAATGGCTACTACCCATGTCGATACCAGTGACAATGGGTCATCTGCCCAATTTGGCACCCCGTTGTACGCTGCCCAATTGTCCCTGTATGGATGCCTATCACCTTAATTGA
- Protein Sequence
- MSVKNNSSLKLLNPRIPKCARCRNHGVISGLRGHKKHCAYRNCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASKETGTSLDTLPPGKIFGMTVTEPCTTPPPPSPTTSDKESIKSSPSNTASSSSASSSSSNMVVSQTAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCGPQPSAFRPPATQMISAPSTQTSPAQQHYAPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCPCMDAYHLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375856;
- 90% Identity
- -
- 80% Identity
- -