Aibi008906.1
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- dmd-4
- Assembly
- GCA_958298945.2
- Location
- OY282606.1:52975749-52991814[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-25 5.9e-21 74.7 12.8 1 47 35 81 35 81 0.98 2 2 0.11 7.7e+02 0.7 0.1 23 33 250 260 242 265 0.78
Sequence Information
- Coding Sequence
- ATGCTACCGTGTACAAGTGCGGTGAATAGTACCTCGACGATAGCCAAGTGTTCGGATATTGCCGCCACTAAAAGTGATTCTAGTTTGAAGTCAATAAATCCGCGAGTCCCGAAGTGTGCCAGGTGTCGGAATCATGGTGTCATATCTGGTCTACGCGGTCATAAGAAACACTGCAGCTACAGAAATTGTAGGTGTCCAAAGTGTGAACTGATCCATGAACGGCAACGAATAATGGCTGCTCAGGTCGCTCTTAAACGACAACAGGCCGTTGAGGATGCGATTGCACTTCGACTAGCATCCAATGAGACTGGCACATCAATGGAAACTTTGCCGCCGGGTAAAATTTTCGGCATGAATGTGACTGAACCTTGTAACACTCCTCCACCACCAACGTCGCCAACTTGCTCCGAAAAGGAATCAATCAAATCGAATTCTTCAAACTCATCGTCGGCGGCAACAGTATCGCAGAGCGCTATTGACATGTTAGCACAACTTTTCCCACATCGAAAACGATCCGTTTTGGAATTGGTCCTGAAACGTTGCGATCTGGATCTGCTTCGGGCTATAGAACAGTGCGGTCCAAAGCCGAGTGCTTTTCGGCCACCAACGACGCAGataTTTCCGCCACCGCCAactccatcaaaccaacaatcccagCCGCACTATGCCCCACTAATCGCTTATCCAAAATGGTTGCTTCCAATGTCGATTCCGGTAACAATGGGCCATCTACCAAATTTGGCGCCACGCTGTACGCTTCCGAATTGTACATGCATGGAAGCTTATCAAATAAATTAG
- Protein Sequence
- MLPCTSAVNSTSTIAKCSDIAATKSDSSLKSINPRVPKCARCRNHGVISGLRGHKKHCSYRNCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNETGTSMETLPPGKIFGMNVTEPCNTPPPPTSPTCSEKESIKSNSSNSSSAATVSQSAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCGPKPSAFRPPTTQIFPPPPTPSNQQSQPHYAPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCTCMEAYQIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375856;
- 90% Identity
- -
- 80% Identity
- -