Scau006667.2
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- stc
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010000824.1:3156-6338[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3 1.4e+04 -4.4 2.8 15 19 288 292 287 295 0.54 2 13 0.13 6.4e+02 0.2 0.3 4 10 321 327 320 329 0.94 3 13 2e-05 0.094 12.5 15.2 3 18 335 350 334 351 0.94 4 13 4.3e-06 0.021 14.6 13.0 1 18 387 404 387 405 0.91 5 13 1e-09 4.9e-06 26.2 10.0 1 19 445 463 445 463 0.97 6 13 8e-05 0.38 10.5 11.4 4 19 510 525 503 525 0.86 7 13 1.9 9e+03 -3.5 2.0 5 10 554 559 554 559 0.93 8 13 0.053 2.5e+02 1.5 12.1 1 11 565 575 565 587 0.90 9 13 7.1e-10 3.4e-06 26.7 16.9 1 19 592 610 592 610 0.98 10 13 3 1.4e+04 -4.5 1.1 6 10 639 643 639 643 0.88 11 13 0.0019 9.2 6.1 12.8 1 19 649 666 649 666 0.83 12 13 3.6e-08 0.00017 21.2 14.7 1 19 702 721 702 721 0.97 13 13 0.44 2.1e+03 -1.4 14.5 3 19 732 750 731 750 0.90
Sequence Information
- Coding Sequence
- ATGTCTTATTGGAACTCTTATGAGAATAATCTATATGGAGAGTACAACACACAATACAATCCAGTTTATGTCGATTATGGTGACAATATGCCCTATTATAATGGACAAATAGTTCCTAATTATCctttaaatcaacaattcaataatatacaacagcagcagcagcagcaacaacagTATCATAATGGCTATTACCAAGAACCAGGCCCTAGTGGTACAAGTAATAGTGGTAATAATCCCAATACTAGTCAGATGactaattcgaattataataataatgataataacgatgatCGGCAAAATACATCAACAACTAGAAACACAGGTGCTGTTAGAAAGAgatttaatgagaaaaatcaatgggttagaagaaattttaataaagcaAAAGAACGTAATAATAGAGATAATGATGAGGGaaatgatttagaaaaatcttATAGTGatagtaaaaataaaaataaatttaaaaattacaataataatacaaataaatttagaaattattatggGGAAAaacgtaattattataaaaatggggatagaaattatcaagaaGTTCGTAATAGtagattcaataaatatgataaaaattttgatgatagtGACGATAATCGCACAAAATGGAGGCGGTTTGATGCGAAGAAATTCACAAACAACGATAAGAAAACACatgatgcTGCTTCTCAACGTGAACGTTTAGAACAAATGTTGAGACGTCGACAATTAGAATGCTTAGTTTgttgtgaaaaaattaaaaatattgataaaatctgGACATGTCAACAATGTTATCTTATATTACATTTAAATTGTACGATAACATGGGctgaatcatcaaaaattgaaaatggttGGCGTTGTCCAGCATGTCAAAATATTTGTCCTGATATTCCAAAACAATATGTCTGTTATTGTGGTAAAACAAACGAGCCACATCCATTACCTGGTATATTACCTCACAGTTGTGGTGAACCATGTATGAAACAAAATCGTTCATGTCAACATAAATGCCCCATATTATGTCATCCAGGACCATGTCCTGATTGTAATATAATCGTAACTAAACCATGCGGTTGTACACAAACAACACAGCAAATTAAATGTAGCTCAAATATCGATATAATATGTGATTCAATTTGTAACAAATTATTAGAATGTAAACAACATTATTGCCAATCAAAATGTCATTCAGGAAATTGTGGTAAATGCAATGAAAATATTAAGCAAATCTGTTATTGTGGTAAAGTGGGACGACGTGTTTTATGTAATAATGAGAATCAAGGTGCTACATCATATAATTGTGGTGATAAATgtggtaaattattgaaatgcgGTAATCATTATTGTCAACAAATTTGTCATGATGGTTCATGTGATGATTGCTCAAGggatattaataaaatcaaaacttgTTCATGTGGTAAAACTGAATTAACACAAATTAGATCGTCGTGTTTAGATCCAATTCCATGTTGTGATAAGATTTGCGGTAAGACTTTGAAATGTGGCCAACCATCGGCGCCCCATATTTGTAAATCCTTATGTCATGAAGACGATTGTCCACCGTGCTCCTTAACGACTTTCGTTCGTTGCCGTTGCGGTCATATGGATAAAGAAATTCCATGTCAAGAATTAACAACGAAGGCTGATGATGCTCGATGCGAGAAAAAATGTACTAAAAAACGTTTATGTGGTAAACATCGTTGTAATCAACgttgttgtattgaaattgaacataTTTGTCCATTACCATGTAATCATTTGTTATCATGTGGGCAACATCGTTGTCAACGTACATGTCATAGTGGCCGTTGTCCTCCATGTCAAGAGACAAGTTTCGATGAATTATATTGTGAATGTGGTGCTAATGTAATTTATCCACCAATACCATGTGGTACAAAACCACCATTATGTAATAAACCATGTTCACGTCAACGTTCGTGTGGTCATGATGTTAATCATAGCTGTCATACTGGTCAATGTCCACCATGTACAGTATTATGTAAACATTGGTGTTATGGTAAACATGAACAACGTTCAGCTATACCATGTTATCAAGAGAATTTCAGTTGTGGTTTACCATGTGGACAACCATTACCGTGCGGTAAACATAAATGTGATAAACCATGTCATTTAGGACAATGCCCATTACCGTGCAAACAAAAATGTACAGTTAAACGTACATTATGTGAACATCCATGTAATTTACCATGTCATAAACCACCATGTCTTAATACACCATGTAAATTTAATGTTCCCATAACTTGTCAATGTGGCCTTCAGAAGAGTTTCCGTTTATGCGTCGATTTGATTGATGAATATAAAGAAATCGAAATGGCGAATTTAAAAGATAAAATGACCGATTTATTGAAGGAACAATCAGTTGATATTAGcgatattattaataaacctAAAAAACcgtcaattttgaaaatATTGGAATGTACAGAAGAATGTCGCGTTGTTGAACGTAATCGTCGCTTCGCTTTAAGTTTACAAATACGCAATCCGGATCTAACGCAAAAATTAACACCACGCTATTCCGATTTTATGCGTCAATGGTCTAAAAAAGATCCACAATTCTGTCAACGTATCCATGATAGATTAACCGAACTGGTACAATTGGCTAAACAAAGTAAACAGAAAAGTCGTTCGTATTCATTTGAATCGATGAATCGTGATAAACGACAATTTGTCCATGAATATTGTGAACATTTCGGTTGTGATAGTGCAGCATATGATCATGAACCAAATCGTAACGTTGTTGCAACAGCTATTAAGGATAAATCATGGTTACCTAGTATGAGTTTATTGGAAACTATACAACGTGAAAATGGACAACGTAAAGTTCCTGGTCCGGTACTAACAAATAAAACGTCAACTTGTAAATCGGAAACtgtttcattgaaattatcagGACGTGGTGGATATGCTGCAATTGCTTCATCTTCATCAGCTTCGTTATCATCAGCAAAGGAAAcgattgattatttcgataatcctccacaataa
- Protein Sequence
- MSYWNSYENNLYGEYNTQYNPVYVDYGDNMPYYNGQIVPNYPLNQQFNNIQQQQQQQQQYHNGYYQEPGPSGTSNSGNNPNTSQMTNSNYNNNDNNDDRQNTSTTRNTGAVRKRFNEKNQWVRRNFNKAKERNNRDNDEGNDLEKSYSDSKNKNKFKNYNNNTNKFRNYYGEKRNYYKNGDRNYQEVRNSRFNKYDKNFDDSDDNRTKWRRFDAKKFTNNDKKTHDAASQRERLEQMLRRRQLECLVCCEKIKNIDKIWTCQQCYLILHLNCTITWAESSKIENGWRCPACQNICPDIPKQYVCYCGKTNEPHPLPGILPHSCGEPCMKQNRSCQHKCPILCHPGPCPDCNIIVTKPCGCTQTTQQIKCSSNIDIICDSICNKLLECKQHYCQSKCHSGNCGKCNENIKQICYCGKVGRRVLCNNENQGATSYNCGDKCGKLLKCGNHYCQQICHDGSCDDCSRDINKIKTCSCGKTELTQIRSSCLDPIPCCDKICGKTLKCGQPSAPHICKSLCHEDDCPPCSLTTFVRCRCGHMDKEIPCQELTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHICPLPCNHLLSCGQHRCQRTCHSGRCPPCQETSFDELYCECGANVIYPPIPCGTKPPLCNKPCSRQRSCGHDVNHSCHTGQCPPCTVLCKHWCYGKHEQRSAIPCYQENFSCGLPCGQPLPCGKHKCDKPCHLGQCPLPCKQKCTVKRTLCEHPCNLPCHKPPCLNTPCKFNVPITCQCGLQKSFRLCVDLIDEYKEIEMANLKDKMTDLLKEQSVDISDIINKPKKPSILKILECTEECRVVERNRRFALSLQIRNPDLTQKLTPRYSDFMRQWSKKDPQFCQRIHDRLTELVQLAKQSKQKSRSYSFESMNRDKRQFVHEYCEHFGCDSAAYDHEPNRNVVATAIKDKSWLPSMSLLETIQRENGQRKVPGPVLTNKTSTCKSETVSLKLSGRGGYAAIASSSSASLSSAKETIDYFDNPPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566662; iTF_00987532; iTF_00930002; iTF_01022683; iTF_00814086; iTF_00814771;
- 90% Identity
- -
- 80% Identity
- -