Ltri000952.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- stc
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000072.1:16130-19387[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.8 1.3e+04 -4.0 1.6 15 19 283 287 282 287 0.81 2 14 0.73 3.5e+03 -2.2 0.6 4 10 316 322 316 325 0.92 3 14 2e-05 0.093 12.5 15.2 3 18 330 345 329 346 0.94 4 14 0.0092 44 3.9 13.6 1 18 382 399 382 400 0.92 5 14 7e-10 3.3e-06 26.7 8.6 1 19 440 458 440 458 0.97 6 14 2.7e-05 0.13 12.0 15.2 4 19 505 520 498 520 0.87 7 14 1.9 8.9e+03 -3.5 2.0 5 10 549 554 549 554 0.93 8 14 0.0041 19 5.0 8.3 1 11 560 570 560 572 0.96 9 14 1.5 7.2e+03 -3.2 1.0 4 10 575 581 574 582 0.68 10 14 5.3e-09 2.5e-05 23.9 16.3 1 19 587 605 587 605 0.98 11 14 3 1.4e+04 -5.2 1.4 6 10 634 638 633 638 0.63 12 14 0.0089 42 4.0 11.7 1 19 644 661 644 661 0.83 13 14 1.6e-08 7.5e-05 22.3 14.9 1 19 697 716 697 716 0.97 14 14 0.61 2.9e+03 -1.9 11.9 3 18 727 744 726 745 0.84
Sequence Information
- Coding Sequence
- ATGTCTTATTGGAATAATTATGAGGATAATCTATATGGTgattttacacaatttaatCCAGTTTATGTTGATTATGTTAACAATATGCCCTATTATAATGGACAAATAGTTcctaattatcaacaaaatcaacaattcaatcATCTACAACAGCCACAATATCCAAATGATTATTACCAAGAACCGAGACCTAGTACTTCTAGTAACAACAGTAATAATGCAAGTCAGGTGACTAATACGAATCAGGGTAattgtagtaatagtagtagtaatggtaataatgtGGATAATCGACAAGATGTAGCTAGAAGTACAGGTGCTGTTAAAAAACGTTATAACGAGAAAAATCAATGGTTTAGaaggaattttaataaaactaaagaacataatagtaataatgatgatgaagctaatttagaacaaattcATGatcataaaaatagaaataagaatagaagttataataaaacaaataattctagaagttattataatgaaaaacaacgtaattattatagaaataatgatAGAAATCATCATGAAAATCGTAATGgtcgatttaataaaaattatgatgatcatgatgataataataaaacaaaatggagacgatttgataatagaaaattcaatcatactaatgataaaaaaacgaTGGATGCTGCTTCACAACGTGAACGTCTCGAACAGATGTTAACACGTCGCCAATTAGAATGTTTAGTATGTTgtgagaaaataaaaaatattgataaaatctgGACATGTCAACAATGTTAtcttattttacatttaaattgtaCAATAACATGGGCtgaatcatcaattaaaattgataatggtTGGCGTTGTCCAGCATGTCAATATATTTgtacaacaataccaaaacaatattattgttattgtggtAAAATGATTGAACCACAACAATTACCTGGTATTTTACCACATAGTTGTGGTGAATCATGTATGAAACAAAATCGTTTATGTCAACATAAATGTCCAATATTATGTCATCCAGGACCATGTCCTGAttgtaatataattgtaaCGAAATTATGTGgttgtaaaaaaacaacacaacaaattaaatgtagctcaaatattgatataatttgtgattcaatttgtaataaattattagaatgtcaacaacattattgtcAAATGAAATGTCATCCAAATGATTGTGATAAATGTcatgaaacaattaaacaaatttgttattgtgGTAAAGTTGGACGACgtgttaattgtaataatgagaataatgGTGCTACATTATATAGTTGTGATGATGTGtgtggtaaattattaaaatgtggTAATCATTATTGTGAGAAAATTTGTCATGATGGTGCATGTGATGATTGCTCAAgagatattaataaaattacaacatgtCCATGTGGTAAAACTGAATTAACACAATCTAGATCATCGTGTTTAGATCCAATTCCATGTTGTATTAagATTTGtggtaaaattttgaaatgtggCCAACCATCATCTCCACACATTTGCAAATCACCATGTCATGAAGGTGTTTGTCCACCATGTCCTCTAACAACTCTAGTACGTTGCCGTTGCGGTCATATGGATAAAGAGATATGCTGcaatgaattaacaacaaaagctGATGATGCTCGATGTGAAAAGAAATGCACCAAGaaaCGTTTATGCGGTAAACATCGTTGTAATCAACGTTGTTGTATAGAGATCGAACACGTATGCCCATTACCATGTAATCATCTATTATCGTGTGGTCAACATCGTTGTCAACGTACTTGCCATAGTGGACGTTGTCCACAATGTCAAGAAACTAGTTTCGATGAATTATATTGTGAATGTGGTGCTAATGTTATTTATCCACCAATACCATGTGGtacaaaaccaccaccatgTACAAATCCATGTTCACGTACACGTCAATGTGGTCATGATGTTAATCATAGTTGTCATATAGGTCAATGTCCACCATGTACAGTTCTATGTAAACGTTGGTGTTTTGGTAAACATGAACAACGTTCAGCTATACCATGTTATCAAGAAGATTTCAGTTGTGGTTTACCATGTGGACGATCATTACCATGCGGTAAACATAGATGTGATAAACCATGTCATTTAGGTCCATGTCCATTACCATGTAAACAGAAATGTTCAGTAAAACGTACATTATGTGAACATCCATGTAATATGCCATGCCATCAATCATCATGTCCAAATACAGCGTGTCGTTTTAATGTACCAATAACGTGTCAATGTGGCCTTCAGAAGAGTACACGTTTATGTGTTGATTTAACTGATGAATATAAAGAGATTGAAATGGCgaatttaaaagataaaatgacggatttattaaaagaacaatCGGTTGATATTAgtgatattgttaataaaaataaaaaaccatcaattttaaaaatATTGGAGTGTACGGAAGAGTGTCGTGTAGTTGAACGTAATCGTCGATTTGCATTAAGTTTACAAATACGTAATCctgatttaacacaaaaattaacacCACGCTATTCTGATTTTATGCGTCAATGGACAAAAAAAGATCCACAATTCTGTCAACGTATCCATGATAAATTAACCGAATTAGTACAATTAGCTAAACAAAGTAAACAAAAGAGTCGTTCATATTCATTTGAATCAATGAATCGTGATAAAAGACAATTTATACATGAATATTGTGAACATTTTGGTTGTGAGAGTGCAGCATATGATCAAGAACCAAATCGTAATGTTGTTGCAACAgctattaaagataaatcatGGTTACCTAGTATgagtttattagaaattatacaACGTGAGAATGGTCAACGAAAAGTACCAGGACCGGTTTtgggtaataaaacaataacaagcAAATCTGAGACggtttcattgaaattaacaGGACGGAATGGTGGGTATGCTGCTGCTGCTatagcatcatcatcatcaccatccaCGTCATCGGCTTTATCTAAGGAAACTATTGATTATTTCGATAATCCTCCACAATAG
- Protein Sequence
- MSYWNNYEDNLYGDFTQFNPVYVDYVNNMPYYNGQIVPNYQQNQQFNHLQQPQYPNDYYQEPRPSTSSNNSNNASQVTNTNQGNCSNSSSNGNNVDNRQDVARSTGAVKKRYNEKNQWFRRNFNKTKEHNSNNDDEANLEQIHDHKNRNKNRSYNKTNNSRSYYNEKQRNYYRNNDRNHHENRNGRFNKNYDDHDDNNKTKWRRFDNRKFNHTNDKKTMDAASQRERLEQMLTRRQLECLVCCEKIKNIDKIWTCQQCYLILHLNCTITWAESSIKIDNGWRCPACQYICTTIPKQYYCYCGKMIEPQQLPGILPHSCGESCMKQNRLCQHKCPILCHPGPCPDCNIIVTKLCGCKKTTQQIKCSSNIDIICDSICNKLLECQQHYCQMKCHPNDCDKCHETIKQICYCGKVGRRVNCNNENNGATLYSCDDVCGKLLKCGNHYCEKICHDGACDDCSRDINKITTCPCGKTELTQSRSSCLDPIPCCIKICGKILKCGQPSSPHICKSPCHEGVCPPCPLTTLVRCRCGHMDKEICCNELTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHVCPLPCNHLLSCGQHRCQRTCHSGRCPQCQETSFDELYCECGANVIYPPIPCGTKPPPCTNPCSRTRQCGHDVNHSCHIGQCPPCTVLCKRWCFGKHEQRSAIPCYQEDFSCGLPCGRSLPCGKHRCDKPCHLGPCPLPCKQKCSVKRTLCEHPCNMPCHQSSCPNTACRFNVPITCQCGLQKSTRLCVDLTDEYKEIEMANLKDKMTDLLKEQSVDISDIVNKNKKPSILKILECTEECRVVERNRRFALSLQIRNPDLTQKLTPRYSDFMRQWTKKDPQFCQRIHDKLTELVQLAKQSKQKSRSYSFESMNRDKRQFIHEYCEHFGCESAAYDQEPNRNVVATAIKDKSWLPSMSLLEIIQRENGQRKVPGPVLGNKTITSKSETVSLKLTGRNGGYAAAAIASSSSPSTSSALSKETIDYFDNPPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366725;
- 90% Identity
- -
- 80% Identity
- -