Hcic007115.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hycleus cichorii
Gene Symbol
stc
Assembly
GCA_013841215.1
Location
JACDRQ010000065.1:213070-218068[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2 1.3e+04 -5.4 1.8 15 18 237 240 236 240 0.58
2 15 2 1.3e+04 -4.3 2.8 15 19 264 268 263 271 0.54
3 15 0.00013 0.82 9.3 18.7 3 18 311 326 299 327 0.90
4 15 0.038 2.4e+02 1.4 0.6 6 12 353 359 352 359 0.93
5 15 3e-06 0.019 14.5 14.2 1 18 363 380 363 381 0.92
6 15 2.7e-08 0.00017 21.0 14.4 1 19 421 439 421 439 0.99
7 15 7.7e-06 0.049 13.2 11.9 4 19 486 501 479 501 0.86
8 15 1.2 7.4e+03 -3.4 2.0 5 10 530 535 530 535 0.93
9 15 0.0025 16 5.1 8.3 1 11 541 551 541 553 0.96
10 15 0.94 6e+03 -3.1 1.0 4 10 556 562 555 563 0.68
11 15 4.4e-10 2.8e-06 26.8 16.9 1 19 568 586 568 586 0.98
12 15 2 1.3e+04 -4.8 1.3 6 10 615 619 615 620 0.55
13 15 0.00053 3.4 7.3 13.1 1 19 625 642 625 642 0.86
14 15 9.5e-09 6e-05 22.5 15.2 1 19 678 697 678 697 0.97
15 15 0.032 2e+02 1.6 14.1 3 19 708 726 707 726 0.92

Sequence Information

Coding Sequence
ATGTCTTATTGGCATCCTTACGAGAATAATCTGTATGGAGATTTTCCACAATATACTCCCATTTATGTTGATTATAGTAACAATATGTCCTATTATAATGGCCAAACGGTTCCTGATTATCAGTTAAATCAACAATACAATAATTCACCCCAACAAAATGGTTATTATCAGGATTTAGGTCCTAGTACTAGTAGTAGTAGCAGTAATAATACAAGTCAGGTGACTCACGTAAATTATAATGATCGTGATTATCGTCAGGATGCATCACGAAATACAGGTGCTGTTCGGAAACGATTTAATGATAATAAACAATGGGGCGTTAGGAGGAATTTCAATAAAACTAAAGAGCGTCGAAGTGATGAACAAACCGATTTAGAATCGAACCAGAATGACAGTAGAAATAGAAATAAATCTAGAAATTACAGTAGAACCGCTAATTCTAGGAATTATTACGGTGATAAACGTGGTAATAATTACAGAAATGGAGATAATAGGAATTATCAAGAAAACCGTAATCGGTTTAATAACGATAATGTTAATGATAATAAAGCGAAATCGAAACGATTTGATGGCAGGAAATTTCACAATAACGACAAAAAATTGGATGCAGCATCTCAACGTGAACGTTTAGAACAGATGTTAACACGCCGTCAATTAGAATGTTTAGTTTGTTGTGAGAAAATCAAAAATAACGATAAAATCTGGACATGTCAACAATGTTATCTAATTTTACATTTGAATTGTACGATAACATGGGCGGAATCATCTAAAATTGATAACGGTTGGCGTTGTCCAGCTTGTCAAAATATTTGCCAAACTATACCAAAACAATATTATTGTTATTGTGGTAAAACAACAGAACCACGTCCATTACCTGGTATATTACCGCATAGTTGTGGTGATTGTTGTATGAAACAAAGCCGTTTATGTCAACATAAATGTCCAATATTGTGTCATCCTGGTCCATGTCCTGATTGTAATATAATTGTAACGAAATCGTGCGGTTGTAAACGTACAACACAACAAATTAAATGCAGTTCAAATATTGATATAATTTGTGATTCGATTTGTCATAAATTATTGGAATGTCAACAGCATTATTGTCAATCAAAATGCCATCCAGGTGATTGTGGTAAATGTAATGAAACAATTAAACAGATTTGTTATTGTGGTAAAGTTGGACGACGTGTCCAATGCAATAGTGTCAATCAAGGTTCAACATTGTATAGTTGTACTGAACAATGTGGTAAATTATTGAAATGCGGTAATCATCATTGTACGAAAATCTGTCATGATGGTGATTGTGATGATTGTCCAAGAGATATCAATCAGATTCAAACATGCCCGTGTGGTAAAACGGATTTAACTCAAACTAGATCGTCGTGTCTAGATCCGATTCCATGTTGTGATAAAATTTGCGGTAAAGTCTTGAAATGTGGCCAACCATCATCACCGCATATTTGTAAAGCTCGCTGCCATGAAGGTGATTGTCCATCATGTTCTTTAACAACACTAGTACGTTGTCGTTGCGGTCATATGGATAAAGAGATACCATGTTGTGAGTTAAAAACGAAAGCTGATGATGCCCGATGTGAGAAAAAATGCACCAAGAAACGTCTATGTGGAAAACACCGGTGCAATCAACGTTGTTGTATTGAAATCGAACACGTATGTCCATTACCATGCAATCATCAATTATCATGTGGCCAACATCGTTGTCAACGTACATGCCATAGCGGCCGTTGTCCACCATGTCAAGAAACCAGTTTCGATGAATTATATTGTGAATGTGGTTCTAATGTAATTTATCCACCAATACCATGTGGTACAAAACCACCACATTGTAATAATCCATGTCCACGTCCACGTTCTTGTGGACATGATGTTAATCATACATGTCATACTGGTCAATGTCCACCATGTACAGTTTTATGTAAACGTTGGTGTTTTGGTAAACATGAACAACGTTCAGCTATACCGTGTTATCAAGAGGATTTCAGTTGTGGTTTACCATGCGGTCAAGCTTTACCTTGTGGTAAACATAAATGCGATAAACCGTGTCATTTAGGGCCATGTCCATTACCGTGTAAACAGAAATGTACAGTAAAACGAACATTATGTGAACATCCATGTAATGCACCATGTCATCGATCATCATGTCCAAATACACCGTGTAAATTTAGTGTTTCAATAACGTGCCAATGTGGCCTTCAGAAGAGTACACGATTGGAATGCACCGAAGAATGTCGCGTTGTTGAACGTAATCGTCGATTCGCTTTAAGTCTACAAATCCGCAATCCTGATTTAACCCAAAAATTAACACCACGCTATTCGGATTTTATGCGTCAATGGACCAAAAAAGATCCACAATTCTGTCAACGTATCCACGATAAACTAACTGAATTAGTACAATTAGCCAAACAGAGTAAACAAAAAAGCCGTTCATATTCATTTGAATCAATGAATCGTGATAAACGACAATTTGTCCATGAATATTGTGAACATTTCGGTTGTGACAGTGCAGCATATGATCAAGAACCAAATCGTAATGTTGTCGCAACAGCTATTAAAGATAAATCCTGGCTACCTAGTATGAGTTTATTAGAGACAATACAACGTGAACATGGTCAACGTAAAGTTCCTGGGCCTGTATTGAGCAATAAAACGACCACTAGTACGAGTAAATCGGAAACGGTTGCATTGAAATTAACTGGACGTAATGGTGGTAATACTGGTGGATATGCTGCAGCAGCATCAGTGCCGTTATTGAAGGAAACTGTTGATTATTTTGATAATCCTCCACAATAG
Protein Sequence
MSYWHPYENNLYGDFPQYTPIYVDYSNNMSYYNGQTVPDYQLNQQYNNSPQQNGYYQDLGPSTSSSSSNNTSQVTHVNYNDRDYRQDASRNTGAVRKRFNDNKQWGVRRNFNKTKERRSDEQTDLESNQNDSRNRNKSRNYSRTANSRNYYGDKRGNNYRNGDNRNYQENRNRFNNDNVNDNKAKSKRFDGRKFHNNDKKLDAASQRERLEQMLTRRQLECLVCCEKIKNNDKIWTCQQCYLILHLNCTITWAESSKIDNGWRCPACQNICQTIPKQYYCYCGKTTEPRPLPGILPHSCGDCCMKQSRLCQHKCPILCHPGPCPDCNIIVTKSCGCKRTTQQIKCSSNIDIICDSICHKLLECQQHYCQSKCHPGDCGKCNETIKQICYCGKVGRRVQCNSVNQGSTLYSCTEQCGKLLKCGNHHCTKICHDGDCDDCPRDINQIQTCPCGKTDLTQTRSSCLDPIPCCDKICGKVLKCGQPSSPHICKARCHEGDCPSCSLTTLVRCRCGHMDKEIPCCELKTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHVCPLPCNHQLSCGQHRCQRTCHSGRCPPCQETSFDELYCECGSNVIYPPIPCGTKPPHCNNPCPRPRSCGHDVNHTCHTGQCPPCTVLCKRWCFGKHEQRSAIPCYQEDFSCGLPCGQALPCGKHKCDKPCHLGPCPLPCKQKCTVKRTLCEHPCNAPCHRSSCPNTPCKFSVSITCQCGLQKSTRLECTEECRVVERNRRFALSLQIRNPDLTQKLTPRYSDFMRQWTKKDPQFCQRIHDKLTELVQLAKQSKQKSRSYSFESMNRDKRQFVHEYCEHFGCDSAAYDQEPNRNVVATAIKDKSWLPSMSLLETIQREHGQRKVPGPVLSNKTTTSTSKSETVALKLTGRNGGNTGGYAAAASVPLLKETVDYFDNPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01366725;
90% Identity
iTF_00814771;
80% Identity
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