Basic Information

Insect: Mylabris variabilis
Gene Symbol: stc
Assembly: GCA_037464815.1
Location: JAZBGW010000628.1:11372-17010[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 4 1.7e+04 -4.4 2.8 15 19 266 270 265 273 0.54

2 13 0.00033 1.4 8.9 19.0 3 18 313 328 301 329 0.90

3 13 1.4e-05 0.06 13.3 13.3 1 18 365 382 365 383 0.92

4 13 1.6e-09 7e-06 25.9 8.8 1 19 423 441 423 441 0.97

5 13 1.1 4.8e+03 -2.3 0.2 3 6 447 450 447 451 0.80

6 13 8.6e-06 0.037 14.0 13.0 4 19 488 503 481 503 0.86

7 13 2.5 1.1e+04 -3.4 2.0 5 10 532 537 532 537 0.93

8 13 0.069 3e+02 1.5 12.1 1 11 543 553 543 565 0.90

9 13 9.3e-10 4e-06 26.7 16.9 1 19 570 588 570 588 0.98

10 13 4 1.7e+04 -4.3 1.0 6 10 617 621 616 621 0.80

11 13 0.012 50 4.0 11.7 1 19 627 644 627 644 0.83

12 13 4.7e-08 0.0002 21.2 14.7 1 19 680 699 680 699 0.97

13 13 3.1 1.4e+04 -3.8 15.8 4 19 711 728 709 728 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	4	1.7e+04	-4.4	2.8	15	19	266	270	265	273	0.54
2	13	0.00033	1.4	8.9	19.0	3	18	313	328	301	329	0.90
3	13	1.4e-05	0.06	13.3	13.3	1	18	365	382	365	383	0.92
4	13	1.6e-09	7e-06	25.9	8.8	1	19	423	441	423	441	0.97
5	13	1.1	4.8e+03	-2.3	0.2	3	6	447	450	447	451	0.80
6	13	8.6e-06	0.037	14.0	13.0	4	19	488	503	481	503	0.86
7	13	2.5	1.1e+04	-3.4	2.0	5	10	532	537	532	537	0.93
8	13	0.069	3e+02	1.5	12.1	1	11	543	553	543	565	0.90
9	13	9.3e-10	4e-06	26.7	16.9	1	19	570	588	570	588	0.98
10	13	4	1.7e+04	-4.3	1.0	6	10	617	621	616	621	0.80
11	13	0.012	50	4.0	11.7	1	19	627	644	627	644	0.83
12	13	4.7e-08	0.0002	21.2	14.7	1	19	680	699	680	699	0.97
13	13	3.1	1.4e+04	-3.8	15.8	4	19	711	728	709	728	0.92

Sequence Information

Coding Sequence: ATGTCTTATTGGCATCCTTACGAAAATAATCTGTATGGAGATTTTCCACTATATAATCCAATTTATGTTGATTATAGTAACAATATGTCATATTATAATGGACAAACAGTTCCTGATTATCAGTTGaatcaacaatataataatttacatcAACAAAATGGTTATTATCAAGAATTACGCCCTAGTACTAgtggtaataatagtaataatgcaAGTCAGGTGACTCATGTAAATCAAAATGATGGCGAGTATCGTCAGGATGTACCAAGGAATACGGGTGCTGTTAGGAAACGATCtaatgaaaacaaacaatGGGGCGGCGTTCGgagaaatttcaataaaactagAGAACGTAAAAATGATGAACAAACTGATTTAGAATCGAATTATAATGAGAATAAAAACCGAAATAAATCTAGAAATTACAATAGAACTATTaattctagaaattattatggTGATAAACGTAgtaataattacagaaatggGGATAATAGGAATTATCAAGAGAATCGCAATAgatttaataatgataacattaatgataataatagagcGAAATCTAGACGATTTGATGGTAGAAAATTCCACagtaacgataaaaaaatggATGCGGCATCTCAACGTGAACGATTGGAACAGATGTTGACACGCCGCCAATTGGAATGTTTAGTTTGTTGTGAGAAAATCAAGAATATCGATAAAATTTGGACGTGTCAACAATGTTATCTAATCTTACATTTAAATTGTACGATAACATGGGCGGaatcatcaaaaattgataacggTTGGCGTTGTCCGGCATGTCAAAATATTTGCCAAGCAATACCAAAACAATActattgttattgtggtaAAACAACAGAACCGCGTCCATTACCTGGTATATTACCGCATAGTTGTGGTGATTGCTGTATGAAACAGAATCGTACATGTCAACATAAATGTCCAATATTATGTCATCCTGGTCCATGTCCAGAttgtaatataattgtaaCGAAATCATGCGGTTGTCAACGTACAACCCAACAAATTAAATGCAGTTCAAATATCGATATAATATGCGATTCaatatgtaataaattattggaaTGTCAACAGCATTATTGTCAATTAAAATGTCATCCAGGTGATTGTGGTAAATgtaatgaaacaattaaacaGATTTGTTATTGTGGTAAAGTTGGACGGCGTGTACAATGCAATAGTGTTAATCAAGGTTCAACATTATATAGTTGTAATGAACAATGTGGTAAACTATTAAAATGCGGTAATCATTATTGTACGAAAATTTGTCATGATGGTGATTGTGATGATTGTTCAAAAGATATCAACAAGATACATACATGTCCGTGTGGTAAAAGTGAATTAACACAAACTAGATTATCGTGTCTAGATCCAATTCCATGTTGTGATAAGattTGTGGTAAAGTCTTGAAATGTGGCCAACCATCATCGCCGCATATTTGTAAAGCACGTTGTCATGAAGGTGATTGTCCACCCTGCACTTTAACAACACTAGTACGTTGTCGTTGCGGTCATATGGATAAAGAGATACCATGTTGTGAATTAACGACGAAGGCTGATGATGCACGATGCGAAAAGAAATGCACTAAGAAACGTTTATGTGGCAAACACCGTTGCAATCAACGTTGTTGTATAGAAATCGAACACATATGTCCATTACCATGTAATCATCAATTGTCATGTGGTCAACATCGTTGTCAACGTACATGCCATAGTGGCCGTTGTCCACCATGTCAAGAGACTAGTTTCGATGAATTATATTGTGAATGTGGTGCTAATGTAATTTATCCACCAATACCATGTGGTACAAAACCACCACAATGTAATAATCCATGTTCACGTCAACGTTCCTGTGGACATGATGTGAATCATAGTTGTCATATAGGTCAATGTCCACCATGTACAGTTCTATGTAAACGTTGGTGTTTTGGTAAACATGAACAACGTTCAGCTATACCATGTTATCAAGAGGATTTCAGTTGTGGTTTACCATGTGGTCAAGCGTTACCATGTGGTAAACATAAATGCGATAAACCATGTCATTTAGGTCAATGTCCATTACCATGTAAACAAAAATGTACAGTAAAACGGACATTATGTGATCATCCATGTAATGTACAATGTCATCAACCACCATGTCCGAATACACCGTGTAAATTTAATGTTCCAATAACGTGTCAATGTGGCCTTCAAAAGAGTACACGTTTATGTGTTGAATTAATCGATGAATATAAAGAGATTGAAATGGCGAATTTGAAAGATAAAATGACCGATTTGATGAAGGAACAAACTGTTGATATCAGTGATATCGTTAATAAACCGAAGAAaccatcaattttaaaaattTTGGAATGTACAGAAGAATGTCGTGTTGTTGAACGTAATCGTCGATTCGCTTTAAGTTTACAAATTCGTAATCCAGatttaacacaaaaattaacaCCTCGCTATTCAGATTTTCTGCGTCAATGGGCTAAAAAGGATCCACAATTCTGTCAACGTATCCATGATAAACTAACAGAATTAGTacaattatcaaaacaaaGTAAACAGAAGAGTCGTTCATATTCATTTGAATCAATGAATCGTGATAAACGACAATTTATCCATGAATATTGTGAACATTTCGGTTGTGAGAGTGCAGCATATGATCAAGAACCAAATCGTAATGTTGTTGCAACAGCTATTAAAGATAAATCATGGTTACCTAGTATGAGTCTATTAGAGACTATACAACGTGAAAATGGTCAACGAAAAGTTCCTGGACCTGTATTGAGCAATAAAACAACCACCAGTACAAGCAAATCAGAAACGATTGCTTTGAAATTGACTGGTCGAAATGGTGGCAGTAGTGGTTGTGTAGGTGGCGGATATGCTGCAGCAGCATCAGTGCCGTTATCAAAGGAAACTGTTGATTATTTTGACAATCCTCCCCAATAG
Protein Sequence: MSYWHPYENNLYGDFPLYNPIYVDYSNNMSYYNGQTVPDYQLNQQYNNLHQQNGYYQELRPSTSGNNSNNASQVTHVNQNDGEYRQDVPRNTGAVRKRSNENKQWGGVRRNFNKTRERKNDEQTDLESNYNENKNRNKSRNYNRTINSRNYYGDKRSNNYRNGDNRNYQENRNRFNNDNINDNNRAKSRRFDGRKFHSNDKKMDAASQRERLEQMLTRRQLECLVCCEKIKNIDKIWTCQQCYLILHLNCTITWAESSKIDNGWRCPACQNICQAIPKQYYCYCGKTTEPRPLPGILPHSCGDCCMKQNRTCQHKCPILCHPGPCPDCNIIVTKSCGCQRTTQQIKCSSNIDIICDSICNKLLECQQHYCQLKCHPGDCGKCNETIKQICYCGKVGRRVQCNSVNQGSTLYSCNEQCGKLLKCGNHYCTKICHDGDCDDCSKDINKIHTCPCGKSELTQTRLSCLDPIPCCDKICGKVLKCGQPSSPHICKARCHEGDCPPCTLTTLVRCRCGHMDKEIPCCELTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHICPLPCNHQLSCGQHRCQRTCHSGRCPPCQETSFDELYCECGANVIYPPIPCGTKPPQCNNPCSRQRSCGHDVNHSCHIGQCPPCTVLCKRWCFGKHEQRSAIPCYQEDFSCGLPCGQALPCGKHKCDKPCHLGQCPLPCKQKCTVKRTLCDHPCNVQCHQPPCPNTPCKFNVPITCQCGLQKSTRLCVELIDEYKEIEMANLKDKMTDLMKEQTVDISDIVNKPKKPSILKILECTEECRVVERNRRFALSLQIRNPDLTQKLTPRYSDFLRQWAKKDPQFCQRIHDKLTELVQLSKQSKQKSRSYSFESMNRDKRQFIHEYCEHFGCESAAYDQEPNRNVVATAIKDKSWLPSMSLLETIQRENGQRKVPGPVLSNKTTTSTSKSETIALKLTGRNGGSSGCVGGGYAAAASVPLSKETVDYFDNPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01366725;
90% Identity: iTF_00814771;
80% Identity: -