Zimm007495.1
Basic Information
- Insect
- Zonitis immaculata
- Gene Symbol
- stc
- Assembly
- GCA_037414775.1
- Location
- JAZBGX010002237.1:6089-9265[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1 1.5e+04 -4.4 2.8 15 19 278 282 277 285 0.54 2 12 0.044 6.4e+02 0.2 0.3 4 10 311 317 310 319 0.94 3 12 6.5e-06 0.095 12.5 15.2 3 18 325 340 324 341 0.94 4 12 6.1e-06 0.088 12.6 13.7 1 18 377 394 377 395 0.91 5 12 2.8e-09 4.1e-05 23.2 11.6 1 19 435 453 435 453 0.99 6 12 3.9e-06 0.056 13.2 12.9 4 19 500 515 493 515 0.86 7 12 0.62 9e+03 -3.4 2.0 5 10 544 549 544 549 0.93 8 12 0.017 2.5e+02 1.5 12.1 1 11 555 565 555 577 0.90 9 12 2.3e-10 3.4e-06 26.7 16.9 1 19 582 600 582 600 0.98 10 12 0.0019 28 4.6 12.4 1 19 639 656 639 656 0.83 11 12 5.1e-09 7.4e-05 22.4 15.2 1 19 692 711 692 711 0.97 12 12 0.096 1.4e+03 -0.9 15.9 3 18 722 739 721 740 0.89
Sequence Information
- Coding Sequence
- ATGTCGTATTGGAATTCTTATGAGAACAATCTATATGGAAACTTTACACAATATAATCCACCAATTTATGTTGATTACGTTAACAATATGCCATATTATAATGGGCAAATAGTGCCTaatcaacaatacaataatacccaacaatatcaatatcaaaatGGCTATTATCAAGAGCCAGGCCCTAGTGGTATCGATAATAATCGCGATAATAACCCCAACAATAGTCAGATGACTGATTTCAATGTAGGTAATCAACAGGAATTATCAACGGTTAGAAATACAGGTGCTGTTAGAAAGAGATTTCATGAGAAAAAACAATGGGTTAATAATAggaagaatttcaataaaccgAAAGAAcgttgttataataatgagGATGAGGGaaatgatttagaaaaatcttTTAGTGAtagtaaaattaaaaataaatatagaaattataataatgattcaaataaatttagaaactaTTATGGGGATAAACGtaactattataaaaatggAGATAGAAATCATCAAGAAACACGTAATActagatttaataataaatatgataagcattattattatgataatgatgataatcaaaCGAGATGGAAACGGTTTGATTGCAAAAAATTAACGAACAACGATAAAAAAACAgtggATGCTGCTTCTCAACGTGAACGGTTAGAGCAAATGTTGTCACGTCGTCAATTAGAATGTTTAGTTTGTtgtgaaaaaatcaaaaatatcgataaaatcTGGACATGTCAACAATGCTatttaattttacatttaaattGTACAATAACATGGGCTGAATCATCGAAAATCGATAATGGTTGGCGTTGTCCAGCATGTCAAAATATTTGCTTAGATATTCCgaaacaatattattgttattgtggTCAAACAATAGAGCCACGTTCTTCACCCGGTATAATACCACATAGTTGTGGTGAACCATGTATGAAACAAAATCGTTCATGTCAACATAAATGTCCGATATTATGCCATCCAGGACCATGTCCTGAttgtaatataattgtaaCAAAACCGTGTGGTTGTCAACAGACAACACAACAAATTAAATGTAGCTCAAATATTGATGTTGTATGTGATGGAATTTGtaagaaattattagaatgtaAACAACATTATTGTCAATCAAAATGCCATCAAGGCAATTGTGGTAAATGTAATGAGAATATCAAGCAAATTTGTTATTGTGGTAAAGTCGGTCGAAGGGTCTCTTGTAATAATGAGAATCAAGGTGCTACATCATACAGTTGTAGTGATAAATgtggtaaattattgaaatgcgGTAATCATTATTGTGAACAAATTTGTCATGATGGTGTCTGTGGAGATTGCCCAACagatattaatataattaaaacttgTCCTTGTAGTAAAACTGAATTAACAATTACAAGATTATCGTGTCTAGATCCAATTCCATGTTGTGATAAGAAATGTGGTAAAACTTTGAAATGTGGTCAGCCATCGTTTCCTCACATTTGTAAATCACCATGTCATGAAGGTGTTTGTCCACCATGTTCATTAACAACTTTTGTTCGTTGCCGTTGTGGTCATATGGATAAAGAGATTCCTTGTCAAGAATTAACAACGAAAGCTGATGATGCTCGATGCGAGAAAAAATGTACCAAGAAACGTTTATGTGGTAAACATCGTTGTAATCAACgttgttgtattgaaattgaacATATTTGTCCATTACCATGTAATCATTTATTATCGTGTGGCCAACATCGTTGTCAACGTACATGCCATAGTGGTCGTTGTCCACCATGTCAAGAGACTAGTTTCGATGAATTGTATTGTGAATGTGGTGCTAATGTAATCTATCCGCCAATACCATGTGGTACAAAACCACCGTTATGTAAGAATCCGTGTTCACGACAACGTTCTTGTGGACATGATGTTAATCATAGTTGTCATACTGGCACATGTCCACCATGTACAGTTTTATGCAAACGTTGGTGTTATGGTAAACACGAACAACGTTCAGCTATACCATGCTATCAAGAGGATTTCAGTTGTGGTTTACCATGTGGACAGCCATTACCATGCGGTAAACATAAATGTGATAAACCATGTCATTTAGGTCCATGTCCATTACCGTGCAAACAGAAATGTACGATTAAACGTGCATTATGTGAACATCCATGTAATTCACCATGTCATCAACCGCCATGTCCTAATACATCATGTAAATTTACTGTACCAATAACTTGTCAATGTGGCCTACAGAAAGGTTATCGTTTAtgtgttgatttaattgatgaatatAGAGAAATCGAAATGGCCGCTTTAAAAGACAAAATGTCcgatttattgaaagaacaaTCAGTTGATATTAGcgatattgttaataaatctaaaagaccgacaattttaaaaatATTGGAATGTACAGAAGAATGTCGTGTTGTTGAACGTAATCGTCGTTTTGCTTTAAGTTTACAAATCCGCAATCCGGATCtaacacaaaaattaacaCCACGTTATTCTGATACTATGCGTCAATGGGCTAAGAAAGATCCACAATTCTGTCAACGTATCCATGACAAACTAACCGAATTAGTACAATTAGCTAAACATAGTAAACAAAAAAGCCGGTCATATTCATTTGAATCAATGAATCGTGACAAACGACAATTCATCCATGAATATTGTGAACATTTTGGTTGTGAAAGTGCTGCCTATGATCAAGAACCAAATCGTAATGTTGTTGCAACAGCTATAAAAGATAAATCATGGTTACCTAGTATGagtttaatggaaattattcaacGTGAAAATGGACAACGTAAAGTTCCTGGTCCggtattaacaaataaaacatcaaCATGTAAATCGGAAACtgtttcattgaaattatcaggACGTAGTGGATATGCTGCTGCGAttgcatcatcatcatcatctgcTCCATTGGTACCAACATCAAAAGAAActgttgattattttgaaaatccaCCACAGTAA
- Protein Sequence
- MSYWNSYENNLYGNFTQYNPPIYVDYVNNMPYYNGQIVPNQQYNNTQQYQYQNGYYQEPGPSGIDNNRDNNPNNSQMTDFNVGNQQELSTVRNTGAVRKRFHEKKQWVNNRKNFNKPKERCYNNEDEGNDLEKSFSDSKIKNKYRNYNNDSNKFRNYYGDKRNYYKNGDRNHQETRNTRFNNKYDKHYYYDNDDNQTRWKRFDCKKLTNNDKKTVDAASQRERLEQMLSRRQLECLVCCEKIKNIDKIWTCQQCYLILHLNCTITWAESSKIDNGWRCPACQNICLDIPKQYYCYCGQTIEPRSSPGIIPHSCGEPCMKQNRSCQHKCPILCHPGPCPDCNIIVTKPCGCQQTTQQIKCSSNIDVVCDGICKKLLECKQHYCQSKCHQGNCGKCNENIKQICYCGKVGRRVSCNNENQGATSYSCSDKCGKLLKCGNHYCEQICHDGVCGDCPTDINIIKTCPCSKTELTITRLSCLDPIPCCDKKCGKTLKCGQPSFPHICKSPCHEGVCPPCSLTTFVRCRCGHMDKEIPCQELTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHICPLPCNHLLSCGQHRCQRTCHSGRCPPCQETSFDELYCECGANVIYPPIPCGTKPPLCKNPCSRQRSCGHDVNHSCHTGTCPPCTVLCKRWCYGKHEQRSAIPCYQEDFSCGLPCGQPLPCGKHKCDKPCHLGPCPLPCKQKCTIKRALCEHPCNSPCHQPPCPNTSCKFTVPITCQCGLQKGYRLCVDLIDEYREIEMAALKDKMSDLLKEQSVDISDIVNKSKRPTILKILECTEECRVVERNRRFALSLQIRNPDLTQKLTPRYSDTMRQWAKKDPQFCQRIHDKLTELVQLAKHSKQKSRSYSFESMNRDKRQFIHEYCEHFGCESAAYDQEPNRNVVATAIKDKSWLPSMSLMEIIQRENGQRKVPGPVLTNKTSTCKSETVSLKLSGRSGYAAAIASSSSSAPLVPTSKETVDYFENPPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366725;
- 90% Identity
- -
- 80% Identity
- -