Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387628.1:14385443-14394027[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 4.8 3.9e+02 2.4 0.0 3 23 117 137 115 137 0.94

2 19 0.79 65 4.9 0.4 2 23 141 163 140 163 0.94

3 19 0.068 5.6 8.3 0.4 3 23 406 427 404 427 0.96

4 19 0.14 11 7.3 1.0 1 21 435 455 435 456 0.94

5 19 0.05 4.1 8.7 0.1 2 23 466 487 465 487 0.93

6 19 4.6 3.7e+02 2.5 0.7 1 23 503 526 503 526 0.84

7 19 0.072 5.9 8.2 0.5 1 22 535 556 535 558 0.89

8 19 4.3 3.5e+02 2.6 0.3 8 23 609 625 606 625 0.89

9 19 0.00013 0.011 16.8 0.1 2 23 636 658 635 658 0.94

10 19 0.2 16 6.8 0.3 1 23 663 686 663 686 0.95

11 19 2.7e-05 0.0022 19.0 1.8 1 23 692 714 692 714 0.97

12 19 3.4e-05 0.0028 18.6 1.8 1 23 721 743 721 743 0.98

13 19 9.1e-05 0.0075 17.3 2.3 1 23 748 770 748 770 0.96

14 19 0.00093 0.076 14.1 1.9 1 23 776 798 776 798 0.98

15 19 8.3e-06 0.00068 20.6 1.1 3 23 806 826 804 826 0.97

16 19 8.6e-05 0.007 17.4 2.3 2 23 833 854 833 854 0.98

17 19 0.0009 0.074 14.2 0.7 2 23 862 884 861 884 0.97

18 19 0.00026 0.021 15.9 0.6 1 23 889 911 889 911 0.98

19 19 0.00081 0.066 14.3 0.9 1 23 917 940 917 940 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	4.8	3.9e+02	2.4	0.0	3	23	117	137	115	137	0.94
2	19	0.79	65	4.9	0.4	2	23	141	163	140	163	0.94
3	19	0.068	5.6	8.3	0.4	3	23	406	427	404	427	0.96
4	19	0.14	11	7.3	1.0	1	21	435	455	435	456	0.94
5	19	0.05	4.1	8.7	0.1	2	23	466	487	465	487	0.93
6	19	4.6	3.7e+02	2.5	0.7	1	23	503	526	503	526	0.84
7	19	0.072	5.9	8.2	0.5	1	22	535	556	535	558	0.89
8	19	4.3	3.5e+02	2.6	0.3	8	23	609	625	606	625	0.89
9	19	0.00013	0.011	16.8	0.1	2	23	636	658	635	658	0.94
10	19	0.2	16	6.8	0.3	1	23	663	686	663	686	0.95
11	19	2.7e-05	0.0022	19.0	1.8	1	23	692	714	692	714	0.97
12	19	3.4e-05	0.0028	18.6	1.8	1	23	721	743	721	743	0.98
13	19	9.1e-05	0.0075	17.3	2.3	1	23	748	770	748	770	0.96
14	19	0.00093	0.076	14.1	1.9	1	23	776	798	776	798	0.98
15	19	8.3e-06	0.00068	20.6	1.1	3	23	806	826	804	826	0.97
16	19	8.6e-05	0.007	17.4	2.3	2	23	833	854	833	854	0.98
17	19	0.0009	0.074	14.2	0.7	2	23	862	884	861	884	0.97
18	19	0.00026	0.021	15.9	0.6	1	23	889	911	889	911	0.98
19	19	0.00081	0.066	14.3	0.9	1	23	917	940	917	940	0.98

Sequence Information

Coding Sequence: ATGACTTCAGACGAATCGGACGATGAACCGCTAGCCGTCTTGGCAGCCAATAAAAAATTAAATCCAGAGAAATTCGAGGGAATAGTGTTACCTAAAGATATTGTTATAGAGCCCAAGAGAAAGAAAAAGAAGAAGTTAATACCCCCAAAAGGTTTATCGGTAACGATCAAATTCCAGAGTAGACTTAAAAACGCCGCACCGCCTGTTGTGGAAAGGCCTTCGGATGTTTGGTTGTATTTAAAAGATCTGAACCCAAATGGACCCTACAGTTGTTTGCTTTGCTCAGACTGGTTCGTTAACAGATCCAAAATAATCATTCATTATGTTCTAAATCACAAAAAAGATTTCTGTGGGATATGCCGATATTTCGTTCCAGACAGAGAAGCTTGGTGGGAACATGTAAAGTTCCACACTCCGTGGCCGTGCTCTCAGTGTATCGAAAACTTTCACACTGAGAATGCATTACGACAGCATCTGAGTAGTGCTCATAACCTAGTCCATTGTCGTCTCTGCCATTTCCGGGTATCCGATGATGATCAGTACAACACACATCTCTTCCAAAAGCATAACGTCACTAACGTTAGCACAAAAGACGATGAAGTACTTTGGGAATTGGAATTTGAGGGTTGTACGAAGTTCCAATGCTTCTTGTGCTCTAAAACAAATAACTTGACTCGGATGTTCTTCAATCATTACATGGGCTATCATCATTTTACATTGAAATGCTTCACCAGGATTATATCTGGAAAGGACTCCCCATTCTTAGTCTGTGGAGCTGATGTTAGTGCAGAGTTTGTAGAAAACCAGTTGAAGACAACATCGAGATGCGGCTACCTCGATATTGAGAACAAATCTGAAGGTAAAGATGTAGGACAAGCCATCAAAGACGAATCGGCAATAATTCCAGAAGTCAAAGAGGAAATTGTCACACCTGAACCTTTCCGCGAATTGAAATGTGAAGTTGATATTATGAAATGTGAGGAAAATGAAATGGAAAATGAGAATGAGAATGAAAATGAGAATGAAATTGAAGATGACATATCCAAAACCTATAAAGGCGATGAAGATTTCGACGTGACGCTCATGGAGATAGTGATGATACAGAAATGCTACTTTGATTATGTTAAGTTGTTAACAAATGACATAAACATGAATGTGGTGCCTAAAGTTTCCAACATTGGTTACGAAAAACCTGCCTCAGAGAAGGCAACGGACTGTCCTCTGTGTAAAATGACGTCAGAAACTCCTCAAGAGTACTCATCGCATATGTCAAAGACGCACAGTGTGAAATGCTTGCCAATATATTCTTGTAGAGTCTGTACTTCTTCTTTCGATACACAAAATGAGTTGGACTCTCATACTAACCACGAACTAGGTAGTTTCGAGGATCTCTGGATATGCCAGTTCTGTGATAAAGAGTTTGATGACCGAGAAGGAGCTAGGATACATTTGACTGAGCATTGGGAGTTGATACAAATGGATAACTGCTTCAGTCCCCACTTAGGCTTTAAATGTCGGTATTGCCCCACACTCTTCTGGAACGAGACTGATCGGGAAACACATCAAGTGAAGGTTCATTTTAATAAACATAAGGAAGAGTTTTATAAATGTGAAAGCTGTAGTGAAATCTTCAGTGATAAGATATGGTACATTTACCACTACTTCGCTGAACATAACACAACTACGGAGTCATTTCCAATGTACCTGTACAAATGTACCCTCTGTTGCCTGGTGCTAATGGACATACATGAAATGCGCAATCATTTCGATGGAACCCACCCTGAGGCAAGAAAAGTGTTCTGCTCCCTCCATCCGTGCAAGTACAAACCGCTTAGCCAGAGGAAGTCATTTAAGATACATTTAAAGACGATCCACAAGCCGTCAGCGCGTCAGGAAGGCGCTGTGAGTTGTCCCATCTGCAGCCGCGAGTTCCGAAGCTCGCGGGCCCTGAGTGCTCACATGGCGCAGGTGCACGGGCCCGGCAAGTTCAAATGCAAGATATGCAGGGCGGCGTTGAACACTGCGGATGAAAGGAAACTGCATTACCTGATCCGCCACCCTGGGCAACACCCGTTCGAGTGCAACGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAGCAGGAGCACTTGCCGAACAAGCAGAGTTACACCTGCAACTTCTGCAAGAAAGTGTTTGCGAAAAAAGACTCGTTCCGCGAGCACCTGCTGATCCACGAGGGTCCGCGGCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGCTCCAACATGCTGCGGCACGAGCGGCGCCACACCGGCGAGCGCCCGTACGCCTGCCCGCACTGTGAACGCACCTTTGCGGACAAGGGCGCTTGCACATCGCACGCTAGGACTCATTCCAAAACACAGTCTTACGGATGCATGTACTGCGGGCAAACGTTTGTGCAGAAATCAAAACTCACTTATCATATCAGAAAACATACTGGAGAAAATTTGGAGACTTGTACAGTTTGTTCTAAAATATTTACCAGCGCTTGTTCATTACGGGAACACATGAAAATACATACACTCAATAAACAGTCCGTGAAATGTCCATTGTGTGACCGCAAGTACCAAGACGAGCGGTACATGCTGCGGCACCTGCGCACATCGCACACACAAGGCCACTTCACTTGCCCGCTGTGCCGCAAATCCTTGACTAGTGCAGTCGGGCTGAGACACCACGTGATCACCCATAGCCCGTTGAAGACTTATAAGTGTCAAATTTGTCCAAAAGGCTACTCAGCAAGGAAATCTATAGTCAAGCATTTACGTAGACGACACGGACTGAAAGGCAATGAGATCAACATACGAGATTTCTATAATAGACTGGACCCTAGAGAGTGTCAGTTAGGCCTTGACGAAGAACTAATGACCAACATATTCGGACCTCCAAAGAAAGTGATAAATCAAATTCTATTCCGTAACTTTGTGACCTTGAATACAGGTTTAGATCTAACTAAGAAGCCTGAAGAAAAGCCTGCAGAAGAAAAACCTCCTGAAAAGGAACCGCCTGAAGAGATTTCAGAAGATACAAGCGAAAGTACTGTGGAACCTAAAAAAACAGTCAAACCAATAAAGCAAGAAGTAGATGACAGTGAAGGTAATGAGGATCTGGAACCCACGGACTTTGTCAGTGTAAAAATTGAACCAATGGATGATGAGAGTTCTGAGTATATTATTTAA
Protein Sequence: MTSDESDDEPLAVLAANKKLNPEKFEGIVLPKDIVIEPKRKKKKKLIPPKGLSVTIKFQSRLKNAAPPVVERPSDVWLYLKDLNPNGPYSCLLCSDWFVNRSKIIIHYVLNHKKDFCGICRYFVPDREAWWEHVKFHTPWPCSQCIENFHTENALRQHLSSAHNLVHCRLCHFRVSDDDQYNTHLFQKHNVTNVSTKDDEVLWELEFEGCTKFQCFLCSKTNNLTRMFFNHYMGYHHFTLKCFTRIISGKDSPFLVCGADVSAEFVENQLKTTSRCGYLDIENKSEGKDVGQAIKDESAIIPEVKEEIVTPEPFRELKCEVDIMKCEENEMENENENENENEIEDDISKTYKGDEDFDVTLMEIVMIQKCYFDYVKLLTNDINMNVVPKVSNIGYEKPASEKATDCPLCKMTSETPQEYSSHMSKTHSVKCLPIYSCRVCTSSFDTQNELDSHTNHELGSFEDLWICQFCDKEFDDREGARIHLTEHWELIQMDNCFSPHLGFKCRYCPTLFWNETDRETHQVKVHFNKHKEEFYKCESCSEIFSDKIWYIYHYFAEHNTTTESFPMYLYKCTLCCLVLMDIHEMRNHFDGTHPEARKVFCSLHPCKYKPLSQRKSFKIHLKTIHKPSARQEGAVSCPICSREFRSSRALSAHMAQVHGPGKFKCKICRAALNTADERKLHYLIRHPGQHPFECNECGKSFQYKSSLYMHKQEHLPNKQSYTCNFCKKVFAKKDSFREHLLIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCERTFADKGACTSHARTHSKTQSYGCMYCGQTFVQKSKLTYHIRKHTGENLETCTVCSKIFTSACSLREHMKIHTLNKQSVKCPLCDRKYQDERYMLRHLRTSHTQGHFTCPLCRKSLTSAVGLRHHVITHSPLKTYKCQICPKGYSARKSIVKHLRRRHGLKGNEINIRDFYNRLDPRECQLGLDEELMTNIFGPPKKVINQILFRNFVTLNTGLDLTKKPEEKPAEEKPPEKEPPEEISEDTSESTVEPKKTVKPIKQEVDDSEGNEDLEPTDFVSVKIEPMDDESSEYII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00859745; iTF_00063815; iTF_00429255; iTF_00428371; iTF_00819411; iTF_01430138; iTF_00290921; iTF_00858798; iTF_00341556; iTF_00787896; iTF_00820318; iTF_01010624;
90% Identity: iTF_00859745;
80% Identity: -