Basic Information

Insect: Theretra japonica
Gene Symbol: -
Assembly: GCA_033459515.1
Location: CM065934.1:11116925-11126235[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.4 92 4.1 0.1 3 23 116 136 114 136 0.95

2 19 0.084 5.4 8.0 0.4 2 23 140 162 139 162 0.94

3 19 0.02 1.3 9.9 0.4 3 23 395 416 394 416 0.95

4 19 0.088 5.7 7.9 0.3 1 20 424 443 424 445 0.94

5 19 0.097 6.2 7.8 0.2 3 23 456 476 455 476 0.95

6 19 4.9 3.1e+02 2.4 0.6 1 23 492 515 492 515 0.83

7 19 0.00097 0.062 14.1 1.0 1 23 524 547 524 547 0.94

8 19 4.3 2.8e+02 2.6 0.3 8 23 598 614 595 614 0.89

9 19 0.00016 0.011 16.5 0.1 3 23 626 647 624 647 0.94

10 19 0.063 4.1 8.4 0.4 1 23 652 675 652 675 0.96

11 19 2.7e-05 0.0017 19.0 1.8 1 23 681 703 681 703 0.97

12 19 3.4e-05 0.0022 18.6 1.8 1 23 710 732 710 732 0.98

13 19 9.1e-05 0.0059 17.3 2.3 1 23 737 759 737 759 0.96

14 19 0.00016 0.01 16.5 2.1 1 23 765 787 765 787 0.98

15 19 8.3e-06 0.00053 20.6 1.1 3 23 795 815 793 815 0.97

16 19 9.3e-05 0.006 17.3 2.2 2 23 822 843 822 843 0.98

17 19 0.0009 0.058 14.2 0.7 2 23 851 873 850 873 0.97

18 19 0.00026 0.016 15.9 0.6 1 23 878 900 878 900 0.98

19 19 0.00081 0.052 14.3 0.9 1 23 906 929 906 929 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.4	92	4.1	0.1	3	23	116	136	114	136	0.95
2	19	0.084	5.4	8.0	0.4	2	23	140	162	139	162	0.94
3	19	0.02	1.3	9.9	0.4	3	23	395	416	394	416	0.95
4	19	0.088	5.7	7.9	0.3	1	20	424	443	424	445	0.94
5	19	0.097	6.2	7.8	0.2	3	23	456	476	455	476	0.95
6	19	4.9	3.1e+02	2.4	0.6	1	23	492	515	492	515	0.83
7	19	0.00097	0.062	14.1	1.0	1	23	524	547	524	547	0.94
8	19	4.3	2.8e+02	2.6	0.3	8	23	598	614	595	614	0.89
9	19	0.00016	0.011	16.5	0.1	3	23	626	647	624	647	0.94
10	19	0.063	4.1	8.4	0.4	1	23	652	675	652	675	0.96
11	19	2.7e-05	0.0017	19.0	1.8	1	23	681	703	681	703	0.97
12	19	3.4e-05	0.0022	18.6	1.8	1	23	710	732	710	732	0.98
13	19	9.1e-05	0.0059	17.3	2.3	1	23	737	759	737	759	0.96
14	19	0.00016	0.01	16.5	2.1	1	23	765	787	765	787	0.98
15	19	8.3e-06	0.00053	20.6	1.1	3	23	795	815	793	815	0.97
16	19	9.3e-05	0.006	17.3	2.2	2	23	822	843	822	843	0.98
17	19	0.0009	0.058	14.2	0.7	2	23	851	873	850	873	0.97
18	19	0.00026	0.016	15.9	0.6	1	23	878	900	878	900	0.98
19	19	0.00081	0.052	14.3	0.9	1	23	906	929	906	929	0.98

Sequence Information

Coding Sequence: ATGACTTCCGACGAATCGGACGATGAACCACTAGCAGTATTAGCggccaataaaaaaacgaaCCCAGAGAAATTCGCAGGAATCGTTCTACCAAAAGATATTGTGATTGAACCCAAgaggaagaaaaagaagaaattaCTTGCTCCGAAAGGTTTATCCGTGACGATAAGCTTTCAAAACAAAGTTAAAAAGGTCGCACCTGTTGTTGAGCGGCCAGCGGATGTGTGGCTGTATTTAAAAGACCTCAATCCAAATGGTCCGTATAGTTGTTTGCTCTGCTCAGATTGGTTTGTCAATAGatcgaaaataattatacactaTGTTCTTAACCACAAGAAAGACTTTTGCGGGATATGCCGTTACTTTGTACCAGACAGAGAGTCATGGTGGGCACATGTGAAGTTCCACACTCCATGGCCGTGTTCACAATGTGTCGAGAATTTTCACTCAGAGAATGCGCTTCGACAGCACTTAAGCAGCGTGCACAACCTCGTCCACTGCCGACTCTGCCACTTCCGAGTATCAGACGACGATCAGTACAACACACATCTCTTCCAAAAGCATAACGTCACAAATGTCGCCACTAAAGACGACGAAGTGCTCTGGGAGATAGAATACGACGGTTGCGCCAAGTTCCAATGCTTCCTGTGCTCCAAAACGAATAATATGACTCGCATGTTCTTCAATCACTATATGGGATATCACCATTTCACGTTAAAATGTTTCACAAGGATCATATCAGGCAAGGATTCCCCATTTTTAGTGTGCGGTGCGGATGTAAGTGCAGAGTTTGTTGAGAACCAACTAAAATCACAATCGAGATGTGGCTATCTCACTATTGAGCATACAAATGAGCAAACAGAAAACAAAGATACAGAACAGCCTATTAAAACTGAAGTACCCATAGTAGTCACAGAGGTGAAGGAGGAAGTGATCTCCGAACCTCTCAGTGAGATAAAATGTGATGTCGAACTTATTAAAGGTGAAGGTGATGACGAAGATGACATATCGAAAACTTACAAAGGGGATGAAGATTTCGACGTGACGCTGATGGAAATGGTTATGATACAGAAATGCTATTTTGATTATGTGAATGTGTTACTAAATGAGATAAACATGAATGTTGTGCCAAAAGTTTCCAGTATTGGGTATGAGAAGACTGTGCCGGAAGCTCCTGTGGATTGTGTTCTGTGTAAAATGAGTTTCGAAACGCCTCAAGAGTATTCTTCGCATATGACCAAGATGCATTGTGTGAAATGCTCGCCGGTGTATTCATGTAGGGTCTGTTCTTCCTCCTTTGACACTAAGAACGAGCTTGACAACCACACGGCTCAAGAATTAGGTGATTTCGAAGACCTTTGGCTCTGCCAGTTCTGTGATAAAGAGTTTGATGATCGGGAAGGTGCGAGAATACATTTGACTGAACACTGGGATTTGATACAGATAGACAATTGCTTCAGCCCTCATTTAGGGTTCAAATGTAGATATTGCCCAACATTATTCTGGAATGAGACTGACAGAGAATCACATCAGGTCAAagtgcattttaataaatataaggaaGAGTTTTATAAGTGTGAAGGGTGTAATGAAACTTTTAGCGATAAGaTTTGGTATATTTATCACTACTTCTCTCAGCATCTGAAGACGAACCAGCAGTTCCCCATGCACATATTCAAGTGCACGTTATGCTGTTCAGTGCAATGGGACATCCATCAGATACGCGATCATTTTGACCACATTCATCCCGAGGCGAGAAAGGTTTTCTGCTCATTGGAGCCTTGCAAATACAAGCCACTGAGCCAGAGGAAGTCTTTTAAGATACACTTGAAGACTATCCACAAGCCATCAGGGCGTATAATTGGCGCAGTCAACTGTCCGATTTGTACCCGTGAGTTTCGTAGTTCGAGAGCTCTTAGCGCCCACATGGCTCAAGTTCATGGACCGGGCAAGTTCAAATGCAAGATTTGCAGGGAGGCGTTGAATACGGCAGATGAAAGAAAACTCCACTACCTGATCCGTCACCCGGGCCAGCATCCGTTCGAGTGCAACGAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAGCAAGAGCACTTGCCAAACAAACAGAGCTACACCTGCAACTTCTGCAAGAAGGTCTTTGCGAAGAAGGACTCGTTCCGCGAGCACCTGCTGATCCACGAGGGTCCGCGGCACGCGTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGAGACCCTACGCCTGCCCGCACTGCGAACGAACCTTCGCGGACAAGGGCGCGTGCACCTCGCACATCAGGACTCACTCGAAGACTCAATCCTACGGCTGCATGTACTGCGGTCAGACGTTTGTGCAGAAATCAAAACTCACGTATCACATCAGAAAACACACCGGGGAAAACCTGGAGACGTGTTCCGTTTGCTCCAAGATATTCACTAGTGCTTGTTCGTTGCGAGAACACATGAAGATCCACACTATGAATAAGCAGTCTGTCAAGTGTCCACTGTGCGATCGCAAGTACCAAGACGAGCGGTACATGCTGCGTCACCTGCGCACGTCGCACACGCAGGGCCACTTCACGTGCCCGCTGTGCCGCAAGTCCCTCACCAGCGCCGTGGGACTCCGCCACCACGTCATCACGCACAGCCTGCTCAAGACTTACAAGTGTCAAATATGTCCAAAAGGCTACTCAGCTCGCAAATCAATAGTGAAGCATCTGCGCAGACGCCACGGTCTCAAAGGCAACGAGATCAACATCAGAGACTTCTACAACCGCCTGGATCCTAGAGAGTGTGAATTAGGCTTGGACGAAGAAATCATGACCAGCATCTTCGGACCCCCCAAGAAGGTCATAAAGCAAATTCTATTCAGGAACTTCGTCAACTTAAACAAAGGTCTAGACCTAAgtaagaaaccagaagaaagcACATCAGAAGCTGGAGAGAAACTGACCGAACCGGAAGCTTCTGAAGACAATTCTGAGGAAAGTAATGATGAGAGTAGTGATGAAGCGAAGAAAGAAACTGCCACGCCTGTTAATATCAAACAGGAGTGTCCTGAAAATGAAGAGACGGAGGAATTAGAACCAACGGACTTTGTCAGTGTTAAAATTGAACCCATGGACGATGACAGTTCagagtatattatttaa
Protein Sequence: MTSDESDDEPLAVLAANKKTNPEKFAGIVLPKDIVIEPKRKKKKKLLAPKGLSVTISFQNKVKKVAPVVERPADVWLYLKDLNPNGPYSCLLCSDWFVNRSKIIIHYVLNHKKDFCGICRYFVPDRESWWAHVKFHTPWPCSQCVENFHSENALRQHLSSVHNLVHCRLCHFRVSDDDQYNTHLFQKHNVTNVATKDDEVLWEIEYDGCAKFQCFLCSKTNNMTRMFFNHYMGYHHFTLKCFTRIISGKDSPFLVCGADVSAEFVENQLKSQSRCGYLTIEHTNEQTENKDTEQPIKTEVPIVVTEVKEEVISEPLSEIKCDVELIKGEGDDEDDISKTYKGDEDFDVTLMEMVMIQKCYFDYVNVLLNEINMNVVPKVSSIGYEKTVPEAPVDCVLCKMSFETPQEYSSHMTKMHCVKCSPVYSCRVCSSSFDTKNELDNHTAQELGDFEDLWLCQFCDKEFDDREGARIHLTEHWDLIQIDNCFSPHLGFKCRYCPTLFWNETDRESHQVKVHFNKYKEEFYKCEGCNETFSDKIWYIYHYFSQHLKTNQQFPMHIFKCTLCCSVQWDIHQIRDHFDHIHPEARKVFCSLEPCKYKPLSQRKSFKIHLKTIHKPSGRIIGAVNCPICTREFRSSRALSAHMAQVHGPGKFKCKICREALNTADERKLHYLIRHPGQHPFECNECGKSFQYKSSLYMHKQEHLPNKQSYTCNFCKKVFAKKDSFREHLLIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCERTFADKGACTSHIRTHSKTQSYGCMYCGQTFVQKSKLTYHIRKHTGENLETCSVCSKIFTSACSLREHMKIHTMNKQSVKCPLCDRKYQDERYMLRHLRTSHTQGHFTCPLCRKSLTSAVGLRHHVITHSLLKTYKCQICPKGYSARKSIVKHLRRRHGLKGNEINIRDFYNRLDPRECELGLDEEIMTSIFGPPKKVIKQILFRNFVNLNKGLDLSKKPEESTSEAGEKLTEPEASEDNSEESNDESSDEAKKETATPVNIKQECPENEETEELEPTDFVSVKIEPMDDDSSEYII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359103;
90% Identity: iTF_00820318;
80% Identity: -