Basic Information

Insect: Scaptomyza hsui
Gene Symbol: -
Assembly: GCA_018152825.1
Location: JAECXO010000073.1:10360691-10365337[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0006 0.05 14.2 1.9 1 23 226 248 226 248 0.97

2 26 0.0055 0.46 11.2 2.0 1 23 254 276 254 276 0.98

3 26 0.55 46 4.9 0.6 2 23 308 329 307 329 0.96

4 26 0.0032 0.26 12.0 0.7 1 23 403 426 403 426 0.94

5 26 0.12 10 6.9 0.4 2 22 438 458 437 458 0.96

6 26 4.4 3.6e+02 2.1 0.3 1 20 467 486 467 488 0.89

7 26 2.1 1.8e+02 3.1 0.4 2 23 502 523 501 523 0.96

8 26 0.034 2.8 8.7 0.2 1 23 597 620 597 620 0.95

9 26 0.00043 0.036 14.7 0.1 1 22 629 650 629 650 0.95

10 26 0.19 16 6.3 1.9 1 23 659 682 659 682 0.95

11 26 0.00017 0.014 15.9 0.7 2 23 697 718 696 718 0.97

12 26 3.1e-06 0.00025 21.4 5.5 1 23 724 746 724 746 0.98

13 26 0.0027 0.23 12.2 2.4 1 23 895 918 895 918 0.97

14 26 0.0044 0.36 11.5 2.2 1 22 925 946 925 946 0.96

15 26 2.5 2.1e+02 2.8 2.8 1 23 955 978 955 979 0.91

16 26 0.0002 0.017 15.7 1.5 1 23 1003 1025 1003 1025 0.96

17 26 2.8e-05 0.0023 18.4 3.4 1 23 1032 1054 1032 1054 0.98

18 26 0.0058 0.48 11.1 0.0 2 22 1081 1101 1080 1101 0.95

19 26 0.0034 0.28 11.8 2.2 1 23 1146 1169 1146 1169 0.96

20 26 0.0013 0.11 13.1 1.9 1 23 1206 1229 1206 1229 0.97

21 26 0.013 1.1 10.0 3.1 1 23 1251 1274 1251 1274 0.97

22 26 1.2e-05 0.001 19.6 0.1 2 23 1295 1316 1294 1316 0.95

23 26 0.00068 0.056 14.1 3.9 1 23 1322 1344 1322 1344 0.99

24 26 4.5e-06 0.00037 20.9 1.4 1 23 1350 1372 1350 1372 0.97

25 26 1.6e-07 1.3e-05 25.5 4.2 1 23 1378 1400 1378 1400 0.99

26 26 0.00034 0.028 15.0 0.4 1 21 1406 1426 1406 1430 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0006	0.05	14.2	1.9	1	23	226	248	226	248	0.97
2	26	0.0055	0.46	11.2	2.0	1	23	254	276	254	276	0.98
3	26	0.55	46	4.9	0.6	2	23	308	329	307	329	0.96
4	26	0.0032	0.26	12.0	0.7	1	23	403	426	403	426	0.94
5	26	0.12	10	6.9	0.4	2	22	438	458	437	458	0.96
6	26	4.4	3.6e+02	2.1	0.3	1	20	467	486	467	488	0.89
7	26	2.1	1.8e+02	3.1	0.4	2	23	502	523	501	523	0.96
8	26	0.034	2.8	8.7	0.2	1	23	597	620	597	620	0.95
9	26	0.00043	0.036	14.7	0.1	1	22	629	650	629	650	0.95
10	26	0.19	16	6.3	1.9	1	23	659	682	659	682	0.95
11	26	0.00017	0.014	15.9	0.7	2	23	697	718	696	718	0.97
12	26	3.1e-06	0.00025	21.4	5.5	1	23	724	746	724	746	0.98
13	26	0.0027	0.23	12.2	2.4	1	23	895	918	895	918	0.97
14	26	0.0044	0.36	11.5	2.2	1	22	925	946	925	946	0.96
15	26	2.5	2.1e+02	2.8	2.8	1	23	955	978	955	979	0.91
16	26	0.0002	0.017	15.7	1.5	1	23	1003	1025	1003	1025	0.96
17	26	2.8e-05	0.0023	18.4	3.4	1	23	1032	1054	1032	1054	0.98
18	26	0.0058	0.48	11.1	0.0	2	22	1081	1101	1080	1101	0.95
19	26	0.0034	0.28	11.8	2.2	1	23	1146	1169	1146	1169	0.96
20	26	0.0013	0.11	13.1	1.9	1	23	1206	1229	1206	1229	0.97
21	26	0.013	1.1	10.0	3.1	1	23	1251	1274	1251	1274	0.97
22	26	1.2e-05	0.001	19.6	0.1	2	23	1295	1316	1294	1316	0.95
23	26	0.00068	0.056	14.1	3.9	1	23	1322	1344	1322	1344	0.99
24	26	4.5e-06	0.00037	20.9	1.4	1	23	1350	1372	1350	1372	0.97
25	26	1.6e-07	1.3e-05	25.5	4.2	1	23	1378	1400	1378	1400	0.99
26	26	0.00034	0.028	15.0	0.4	1	21	1406	1426	1406	1430	0.91

Sequence Information

Coding Sequence: ATGTTGCCGGCAAGTATTTGTCGCACATGTGCGCTTCAAGATGACAATTTGTTGGCGCTGTCGACGCGCTGTGAAAAATACGCGAACAAAACTATTTGCGACATGTTGCACGAATTAACACAAAACGATCCCCTGTTAGAGCTCGCTGATAATAATCTGCCGCAGCACATGTGCGCCTCATGTTTGAGCCAGCTGGAAGCTGCTTATGCATTTGTCCTGCAGGCTCGCCAGGCTCTGCGATTGTTGCTGCAGCTATACAAAGGATCGCAGACAAAGTGTCTAGAAGAAATGCCCATTGATATTATAGTAGAGCAGATCAAAACCGAAGCAGACATTGACCTAGATGCTGAGACTAACGCTGAATTAAAAGAGCAATTGGAGGATGAGGATGCTGATATAGAGGAGGAGAAAGAGAATGAGATTACCGCTGTGTCTGTCGATGCCTTGAAATGCCAGCCACCAAGTGATACCGATAGCAGTGATGACAACGTAGATAACCATGAGGTTGAGTTCAAGCGCCCGCAACTTCGGCGCAGTGCACGGCGATCCAAACCTTGCACTGATAGCGAAAATGATTCGACGTGCGACCAAGCAAAGCTCCAACCAGCGCCAAAGCGTGGTCGCGGGCGTCCAGCACATCAAAACATAGCAGAAACCATTAACGAGGATGGCCGACACATGTGTAAGGTGTGTGGCAAGACGTACTCATGGTATCGCGACTTGCAGCGCCATGAGCGCATTCACTTTGAGCGGGCGGCCTATGTGTGCGAAAGTTGCGGCAAGAAATTCTTGCGCAAGGATAACTACATGTTTCATTTGCGAACGCACAAAAAACAAGCAGTTAAGGTGCAGCCAGTGCAGGAAGGCAGTGAGTGGCGCTACGCGAAGCTTCTCTACAGCTCGGATCGCCTGAAGCGTGTGGAGTGCAAGCTGTGCGGCTTGAACTGCCAACGCATACAGGAAATGCGTGAGCACTTGGCAAGTCATATAAGCATTGAGACCTTGTCAAATCTCAGTTTGGATAATGATGTTATTAGGGAGCAGTTTGGCGGCCAATGTGACTTGGAACAGATCAAGCAACAGGTGTGCACTCAAATTGCCAAAGGTCGAGAGCAGTTGGAAAACTTTTGCGCTATAGTAAATGCTAACGGCTTTGAACTATGTTTAAGCGACTCGGATGAGGAGTTGCCTGGACAATCGGCTCAATATCAATGCCCGCCCTGCAATGCGAGCTTCACACGCAAATATCGCCTCATAAGTCACACTTTGGAAAAGCACACGCAAACAAAGGACACTGAGACGCCTTGGGTGCGTTGTAATATTTGCCAGATTGGCTTTGTTTGCGCCAAGCTGCTAGAGCAACATCAGCGCACACAGTGCCTCAATCCGCTAAAGCGTTACAGCTGCGAAAATTGTCCCGGCAAATTCATATGGCTACAGAATCTGCAGGAGCATGCTTGCAGCAGACTGCCACAGCATCAGGAACAGGATTGTCGCAAAGTTCAGTGCTGTCTGTGCGATGCCAAACTAAGCGGCATGGCAGCTATGCGCTCCCATTTACTTACCCATCGCGATGGACGCACTGGCATCGATCCACAGCAGCACGCTGCCTTCTTTCGCACCTATTTTCGAGATGATATCGATTGCAGTCTGTCGGAGCTTAGTGCACGCATCGCCGGCGACTTTCAATCTCAGAAATATGGACGCTACTTTAATGCCTGCACAGACAGCGGCCAGGAGTTGGACTTCAACGACTCTGATACTGCTTTGAGCAATGCACCCACTCTGCACAGCTGTGCCGTGTGTGGCGAGAGTACAGAGCTGCTTGTCCAGTTGCAACAACATCAGGAAAGCCAGCACAAGGAGTTGGAGAACAGACTGCCTTTTATTTGCTCTGATTGTGGCTTGGGTTTTGTGGCCAAATCCCTGCTGCAGCAACATCGTCGTCGCATTTGTGCCAAGTTGCAAGCTAAGTATAATTGCATGGAGTGCAGTCAGCGCTTTTACTGGCTCTCCAACTATGAGCGACACAGGCAGCTGAAGCATGGTGTTGAAACACAGGAGGTTCAGCGACAAACAACAAAGTTGCAGTGCAACGAGTGTGAAAAGGTATTTATCTGGTCCAAGGATCTGACGCGTCACAAGCGCATGCATCAGTCTCAGGTGCAGTTTGAATGCACCTTTTGTGACCGCAAATTCCATCGCAAGGATAACCTCAAGTCGCATATGCGAATGCACGGCGAGCCACAGGTGGATGTGTCAACTGTTACCAGTGAACAACAGAACACGTTGCCGCAGCGCATTCCGGAAGTAATGAGCCACTTGTGCCGGCCCAATGGCTGCAAGCAGATTAAGTGCATGATTTGCCTATCCCAGCACACAAAAATCTCCGATTTGCGAACGCATTTAGGTAGCCATCAGTTTGCGCTTCAGTTTTCTGGAGAGCGTGGCCAGCCAGAGAGCATATCCAGCATAAGTCGTTCCCTCTATCCGGAGTTAAGCACTCCACTGGATAAGCAGCAACTTATAAATCGCATACAGAGTGATCTGGCCAAAGGCCAGGAGTTGGAGAGATTCTTTTCGATTACCAACGAGGGCGGCATTGAGCTAAGTTTAGATAGCAGCGAAACAGACACGGATTCGGATTCAGCAGAAAACGAGCGAAGCAGCAGTGGACGCCTGTACACCTGTGAGCTGTGCCAGGTTCGTGTGACTCGTAAGCATCAGCTCTATGCCCACCAGCTGAAACAGCACACATGGGAGCAGGCAGCGCACGTTTGCAGCCACTGCCAGGCAAGATTTGTAAATGAACAGTTGCTGGAGCATCATTATCGCACCCTCTGCCGTAATGGCCAGCGTCGTTTTCTCTGTCGCAAGTGTCCATTGCGCTTTCACTGGCGCGACAATCTTAAGCTACACACTGACGTTGCGCACCATATTGGAAACAAGGAGCAATCCAACGTGGATGTTCAGTTGCAGGGCACACGTATAGTGCCTGTGGTTAGCTACGACTGTGTCGAGTGCAAGCGTAGCTTTAAAATGCAAAAGGATCTCACAAGGCACAATCTAATGCATACCAAGGACTCAAGCATCTATCGTTGTCATTGGTGCGCACGTCGATTCTATCGCAAGTCGAATCTGCTGCAGCACATTGAGCGTCATGGCATCAGCGCCGATCAGCTGCCCTATGCGGAGGCCCTTCTCAATGCCAGTCGTCATCCGCATGGCCAGAAGTGCATCCAGTGTAAGGTGTGCGAAATATCCTTTGTCAGCATTGCGGCACTGCGTTCCCATCTGCAAACTGCGCCAGTTGGCACACATCATGCAATTGAATCGATGCTTAACTATTCCATTACTGATCAACTGGGCTACGAGCTGCACTTGTATGACTCCGAAACGGATGAGGAGGCAAAGCCGGAGGGTACGCCGGCGCATTACACATGCGGCATGTGTCAGCTTCGCTGTGTACGCAAGTTTGAGCTGCAACAGCATCAGCAGGCCATGCATCGTCTGGAGCGGATCAGTGAGGGATGCGAACAGTGTGTCTTCAAGAGCGTCTCACCAGATCTGATTGCCTATCATCGGCGTGTTTTGTGCGGCAATGCGGAGAAACAGTTCAAGTGCTCAAAATGTAGCTACAGATTTATGTGGCAATCGAATCTGGAGCAGCACATGCAGCTTCAACATCCCAGCAGCGGGGAGACGACTTCAATGCCCTTGCCGGATGGCAGCAATCCCGAGAGCCAAATCTTTCAGTGCGGTCAGTGTCCCAGTAAATATAATCGCAAGGATCGTCTTACGGCACATGTGAAAAAATGTCATGCAGATGGTTCAAAAGCCGCCAAAAAGTCGGCAGCGACTGACAAACAACAAAAGAGTTTCTTGTGCGCTTTTTGTGGTAAAGCGGTAAGCTCCTCATCCAATTTAATTATACACATACGTCGGCACACGGGAGAGAAGCCATTTAAGTGTGATTACTGTTTCATGGCCTTTCCACGATCCTCCGACCTCCAATGCCACCGACGCACCCACACCGGGGAGCGTCCTCACGTCTGCACTGTCTGCGAAAGAGGCTTCGCTCGCTCGTACAAGCTACAGCAACACATGCGCATCCACAATGGCGAGCGACCCTACAAGTGTACCCACTGCGACAAGAGCTTCACCCAATCAAATGATCTAACACTCCACATTCGACGACACACGGGCGAGCGTCCCTATCAGTGCAACACGTGCGGCGAGAGATTTATTCAGGGTACAGCGTTAAAGAAACATCGACTGCAGAATGGTCACTACGAAACGGAGGTCGAACAAGACTGA
Protein Sequence: MLPASICRTCALQDDNLLALSTRCEKYANKTICDMLHELTQNDPLLELADNNLPQHMCASCLSQLEAAYAFVLQARQALRLLLQLYKGSQTKCLEEMPIDIIVEQIKTEADIDLDAETNAELKEQLEDEDADIEEEKENEITAVSVDALKCQPPSDTDSSDDNVDNHEVEFKRPQLRRSARRSKPCTDSENDSTCDQAKLQPAPKRGRGRPAHQNIAETINEDGRHMCKVCGKTYSWYRDLQRHERIHFERAAYVCESCGKKFLRKDNYMFHLRTHKKQAVKVQPVQEGSEWRYAKLLYSSDRLKRVECKLCGLNCQRIQEMREHLASHISIETLSNLSLDNDVIREQFGGQCDLEQIKQQVCTQIAKGREQLENFCAIVNANGFELCLSDSDEELPGQSAQYQCPPCNASFTRKYRLISHTLEKHTQTKDTETPWVRCNICQIGFVCAKLLEQHQRTQCLNPLKRYSCENCPGKFIWLQNLQEHACSRLPQHQEQDCRKVQCCLCDAKLSGMAAMRSHLLTHRDGRTGIDPQQHAAFFRTYFRDDIDCSLSELSARIAGDFQSQKYGRYFNACTDSGQELDFNDSDTALSNAPTLHSCAVCGESTELLVQLQQHQESQHKELENRLPFICSDCGLGFVAKSLLQQHRRRICAKLQAKYNCMECSQRFYWLSNYERHRQLKHGVETQEVQRQTTKLQCNECEKVFIWSKDLTRHKRMHQSQVQFECTFCDRKFHRKDNLKSHMRMHGEPQVDVSTVTSEQQNTLPQRIPEVMSHLCRPNGCKQIKCMICLSQHTKISDLRTHLGSHQFALQFSGERGQPESISSISRSLYPELSTPLDKQQLINRIQSDLAKGQELERFFSITNEGGIELSLDSSETDTDSDSAENERSSSGRLYTCELCQVRVTRKHQLYAHQLKQHTWEQAAHVCSHCQARFVNEQLLEHHYRTLCRNGQRRFLCRKCPLRFHWRDNLKLHTDVAHHIGNKEQSNVDVQLQGTRIVPVVSYDCVECKRSFKMQKDLTRHNLMHTKDSSIYRCHWCARRFYRKSNLLQHIERHGISADQLPYAEALLNASRHPHGQKCIQCKVCEISFVSIAALRSHLQTAPVGTHHAIESMLNYSITDQLGYELHLYDSETDEEAKPEGTPAHYTCGMCQLRCVRKFELQQHQQAMHRLERISEGCEQCVFKSVSPDLIAYHRRVLCGNAEKQFKCSKCSYRFMWQSNLEQHMQLQHPSSGETTSMPLPDGSNPESQIFQCGQCPSKYNRKDRLTAHVKKCHADGSKAAKKSAATDKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCFMAFPRSSDLQCHRRTHTGERPHVCTVCERGFARSYKLQQHMRIHNGERPYKCTHCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKKHRLQNGHYETEVEQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01327297; iTF_01321321; iTF_01328020; iTF_01320599;
90% Identity: -
80% Identity: -