Basic Information

Insect: Scaptomyza cyrtandrae
Gene Symbol: -
Assembly: GCA_035044605.1
Location: JAWNNS010000640.1:19776982-19781902[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00053 0.039 14.5 1.6 1 23 227 249 227 249 0.97

2 26 0.11 8.2 7.2 3.1 1 23 255 277 255 277 0.98

3 26 0.41 30 5.4 0.8 2 23 309 330 308 330 0.96

4 26 0.041 3 8.6 1.3 1 23 404 427 404 427 0.93

5 26 1 76 4.1 0.3 2 22 439 459 438 459 0.94

6 26 2.1 1.6e+02 3.1 0.5 1 20 468 487 468 489 0.91

7 26 0.082 6.1 7.6 0.6 2 23 503 524 502 524 0.97

8 26 0.0017 0.13 12.9 0.5 1 23 598 621 598 621 0.95

9 26 0.074 5.5 7.7 0.0 1 22 630 651 630 651 0.95

10 26 0.099 7.3 7.3 3.6 1 23 660 683 660 683 0.95

11 26 0.00019 0.014 15.9 0.4 2 23 703 724 702 724 0.97

12 26 1.1e-05 0.00084 19.7 5.5 1 23 730 752 730 752 0.98

13 26 0.0097 0.72 10.5 2.2 1 23 901 924 901 924 0.95

14 26 0.0047 0.35 11.5 2.2 1 22 931 952 931 952 0.96

15 26 0.085 6.3 7.5 0.5 1 23 961 984 961 984 0.91

16 26 8.2e-05 0.0061 17.0 2.0 1 23 1010 1032 1010 1032 0.97

17 26 6.4e-05 0.0048 17.4 2.4 1 23 1039 1061 1039 1061 0.98

18 26 0.0084 0.63 10.7 0.0 2 20 1088 1106 1087 1108 0.94

19 26 0.0037 0.27 11.8 2.2 1 23 1153 1176 1153 1176 0.96

20 26 0.0017 0.13 12.9 2.1 1 23 1213 1236 1213 1236 0.97

21 26 0.014 1 10.0 3.1 1 23 1258 1281 1258 1281 0.97

22 26 1.3e-05 0.00097 19.5 0.1 2 23 1303 1324 1302 1324 0.95

23 26 4.4e-05 0.0033 17.9 2.9 1 23 1330 1352 1330 1352 0.99

24 26 4.9e-06 0.00036 20.9 1.9 1 23 1358 1380 1358 1380 0.97

25 26 5.6e-08 4.1e-06 27.0 2.4 1 23 1386 1408 1386 1408 0.99

26 26 0.00066 0.049 14.2 0.3 1 21 1414 1434 1414 1438 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00053	0.039	14.5	1.6	1	23	227	249	227	249	0.97
2	26	0.11	8.2	7.2	3.1	1	23	255	277	255	277	0.98
3	26	0.41	30	5.4	0.8	2	23	309	330	308	330	0.96
4	26	0.041	3	8.6	1.3	1	23	404	427	404	427	0.93
5	26	1	76	4.1	0.3	2	22	439	459	438	459	0.94
6	26	2.1	1.6e+02	3.1	0.5	1	20	468	487	468	489	0.91
7	26	0.082	6.1	7.6	0.6	2	23	503	524	502	524	0.97
8	26	0.0017	0.13	12.9	0.5	1	23	598	621	598	621	0.95
9	26	0.074	5.5	7.7	0.0	1	22	630	651	630	651	0.95
10	26	0.099	7.3	7.3	3.6	1	23	660	683	660	683	0.95
11	26	0.00019	0.014	15.9	0.4	2	23	703	724	702	724	0.97
12	26	1.1e-05	0.00084	19.7	5.5	1	23	730	752	730	752	0.98
13	26	0.0097	0.72	10.5	2.2	1	23	901	924	901	924	0.95
14	26	0.0047	0.35	11.5	2.2	1	22	931	952	931	952	0.96
15	26	0.085	6.3	7.5	0.5	1	23	961	984	961	984	0.91
16	26	8.2e-05	0.0061	17.0	2.0	1	23	1010	1032	1010	1032	0.97
17	26	6.4e-05	0.0048	17.4	2.4	1	23	1039	1061	1039	1061	0.98
18	26	0.0084	0.63	10.7	0.0	2	20	1088	1106	1087	1108	0.94
19	26	0.0037	0.27	11.8	2.2	1	23	1153	1176	1153	1176	0.96
20	26	0.0017	0.13	12.9	2.1	1	23	1213	1236	1213	1236	0.97
21	26	0.014	1	10.0	3.1	1	23	1258	1281	1258	1281	0.97
22	26	1.3e-05	0.00097	19.5	0.1	2	23	1303	1324	1302	1324	0.95
23	26	4.4e-05	0.0033	17.9	2.9	1	23	1330	1352	1330	1352	0.99
24	26	4.9e-06	0.00036	20.9	1.9	1	23	1358	1380	1358	1380	0.97
25	26	5.6e-08	4.1e-06	27.0	2.4	1	23	1386	1408	1386	1408	0.99
26	26	0.00066	0.049	14.2	0.3	1	21	1414	1434	1414	1438	0.91

Sequence Information

Coding Sequence: atgttGCTGACGAATATTTGTCGTACATGTGCGTTGCAAGACGACAAGTTGTTGGTGCTGTCATCGCGCAGTAAAAAACACCCTGAGAACAGTATTTGCGACATGTTGCACGAATTAACACAAAACGATCCCCTGTTGGAGCATTCAGATGATAAACTGCCGCAGCATCTGTGCGGCCCATGTTTAATCCAGCTGGAAGCTGCCTATGCATTTGTAGTTCAGGCTCGGCAGGCTCagaagctgctgttgctgcagctacGCAAAGGATTGCAGACAAAGTGTTTGGAAGAATTGCCCATTGATATTTCACTAGAGCACATCAAAACCGAAACAGACATTAACCTAGATGCTGACACCAACGCACAAATTAATGTACAATTGGAGGACGAGAATGCTGATATGGAGGAGGATAAAGAGAAGGGGCTTTCTGCTGTGTCTGCCAGTGGTTTCAAATGCCAACCAACAAGTGATAGCAGTAGCAGTGAAGAAAACGTACATAAcgaTGATGCTGAGTTTAAGCCCCCGCAGCTTCGGCGCAGTGCACGACGATCCAAACCTATCATGTTAAGCGAAAATAAGTCGACATGTGACCAAGAAAAGATTCAGCCACCAGTCAAGCGTGGTCGTGGGCGTCCCGCACGTCAAAACACAACGGAGACCATCAACGAAAATGGCCGGCACATGTGCAATGTTTGTGGCAAGACGTATTCGTGGTATCGCGACTTGCAGCGCCATGAGCGCATACATTTTGAGCAGGCAGCCTTTGTGTGCCAGAGCTGCGGCAAGAAATTCTTGCGCAAAGATAAGTACATGTTCCATTTGCGGACGCACGAGAAGCAAGCAGTTAAAGTACAGGCGTTGCAGATGAGCAGTGAATGGCGCTACGCTGAGCGTCTCTACAGCTCAGGCCGCCTGAAGCGTGTGGAATGCAAACTGTGTGGTTTGAAGTGCCAGCGCATACAGGAGATGCGTGAGCATTTGGCAAGTCATGTTAACATTGAGACTTTGTCAAATCTCAGTTTGGACAATGATGTAATCAGGGAGCAATTTGGCACCCAATGGGATTTGCAACAGATCAAGCAACAGGTGTGCATGCAAATATCGAAAGGCCGCGACCAGCTAGAGAACTTTTGTGCTATTGTTAATGCGTACGGCTATGAGCTGTGCCTTAGCGACTCGGATGAGGAATTACCTGGCGTGTTGGCTCAATATCAATGCCTGCCCTGCAACGCCAGCTTCACACGCAAACATCGCCTTATTCAACACACGTTGGAGGAGCACACGCAAACAAACGAAACTGAAACGCCATGGGTGCGTTGCAATATCTGCCAAATTGGCTTTGTTTGCATCAATCTGCTGGAGCAACATCAGCGCACACAATGCCTCAATCCACTCAAGCGTTACAGTTGCAATAATTGTCCCGGCAAATTCATTTGGCTTCAAAATCTACAGCAACACGCTTGCAGTAGATTGCAACAGGATCAACCAAAGGATTATCGCAAAATTCAGTGTTGTCTGTGCGATGCCAAACTCAGCAGCATGGTAGCTTTGCGATCCCATTTACTTACGCATCGCGATGGACACACTGGCATCGATCCGCAGCAGCACGCTGCCTTCTTTCGCACATACTTTCGAGATGATATCGATTGCAGTCTTTCAGAGCTAAGTACACGCATCGCTGACGACTTTCAATCACAAAATTATGGACGCTATTTTAATGCCTGCACGGGCAGCGGCCAGGAATTGGACATCAATGATTCCGACACTGCTTTCAGCGATGCATCCAGTCTGCACATATGTGGCGTGTGTGGCGAGAGTACAGAACGTCTCATCCAGTTGCAAAAACATCAGGAAAGTAAACACAATGAGCTCGACAACAGATTGCCTTACATCTGCGCTGATTGTGGGTCGGGTTTTGTGGCCGACtcgctgctgcagcaacatcGTCGTCGTATTTGCGACAAGCAGCAAGCTAAATACAATTGCTCGGAATGCAGGCAGCGGTTTTACTGGCTCTCCAACTATGAACGACACATGCATCTGAAGCATGCTGTTAAGCATGCGGGAGAGGCTCAGGTTCagacacacaagcaaacaacaaagttgCAGTGCACCGAATGCGAAAAGgtatTTATATGGCCCAAGGATCTGACGCGTCATAAGCGGATGCATCAGTCACAGGTGCAGTTTGAATGCACTTTTTGTGAGCGCAAGTTCCATCGTAAGGATAACCTTAAGTCGCATATGCGAATGCACGGCGAACAACAATTGGATGCGTTTACTATTACAAGTGAGCAACAGGTCACGATGCAGCAGAGCATGCCTTTGGTATTGAGCCACTTGTGTCGTCCCAATGGCTGCAAGCAGATTCAGTGCATGATTTGCCTATCCCATCACACAAAGATCTCCGATTTGCGAACGCATTTAAGTAGTCATCAGTTTGTGCTACAGTTTTCTGGAGATCGTGGCGAACCAGAGAGCATATCCAACATTTGTCGTGCTCTCTATCCTGAGCTAAGTGCGCCTTTAGATAAGCAGAACTTAATAATGCGCATACAGAGTGATTTAGCTAAAGGTCTGGAATTTGAAAGATTTATTTCGATTACCAATGAGGCAGGCAATGAGTTAAGCTTAGATAGCAGCGAAACAGATACTGATTCGGATTCAGCAGACAACAAGCAGAGCAGCAGTGGACGCCAGTACACCTGCGAGCTGTGCCAGGTTCGTGTGACTCGCAAGCATCAGCTCTATTCCCATCAGCTGGAGCAGCACACGTGGGAGCAGGCAGCGCACGTTTGCAGCCACTGCCAGGCAAGATTTGTGAATGAACAGCTGCTGGAGCATCATTATCGCACCCTCTGCCGTAACGCTCAGCGTCGTTTTCTTTGTCGCAAGTGTCCATTACGCTTTCGCTGGCGCGACAATCTTAAATTACATACTGACGTTGCGCATCAGGATGGGAAATTACAAGGACAGGGCAATGTGAAAACTCAGCTGAATGGTTCACGAATGCTGCCGGTTATAAGCTACGACTGTATGGAGTGCAAGCGTAgcttcaaaatgcaaaaggaTCTCACAAGGCACACGCTAATGCATACCCAAGACTCGAGCATCTATCGTTGTCATTGGTGCGCACGTCGCTTCTATCGAGAGTCAAATCTGCTGCAGCACATTGAGCGTCATGGCATCAGTGCCGATCAGCTGCCCTATGCGGAGGCTCTTCTCACTGCCAATCGTCATCCGCATGGTCAGAAGTGCATTCAGTGTAAGGTGTGCGAAATTTCCTTTACCAGCATTGCGGCACTGCGTTCCCATCTGGGATCAGCACCAGTTGGCACACATCATGCAATTGAATCTATGCTCAACTACTCCATTACTGATCAGTTGGGCTATGAGCTGCACTTGGATGACTCGGAAACGGATGAGGAGGCCAAGCCGGATGGTACGCCAGCACATTACACTTGTGGCATGTGCCAGCTGCGTTGTGTGCGCAAATTTGagctgcaacagcatcagcaggcCATGCATCGTCTAGAGCGAATCAGTGAGGGATGCCAGCTTTGCATCTTTAAGAGCGTTTCGCCGGATCTGATTGCCTATCATCGGCGCGTTTTGTGCGGCAATACGGAAAAAAAGTTCAAGTGCTCAAAATGTAGCTACAAATTTATGTGGCAATCAAATCTTGAGCAGCACATGCAGCTACAGCATCCCAGTAGCGGGGAGCCGACTTCGATTCCCGTGCCAGACAATGGCAACTCTGAGAGCCAAATCTTTCAGTGCGGTCAGTGTCCTAGTAAATATAATCGTAAGGATCGCCTTACAGCGCATGTGAAGAAATGTCATGCAGATGGCGCAACAGCCTCTAAAAAATCACCAGCGATACCAGCCAAGCAACAAAAGACTTTCTTGTGCGCTTTTTGTGGCAAAGCGGTAAGCTCCTCGTCCAATTTAATTATACACATACGTCGACACACGGGAGAGAAGCCATTCAAGTGCGATTATTGCGACATGGCCTTTCCACGTTCCTCTGATCTCCAATGCCACAGGCGCACCCACACCGGGGAGCGACCTCATGTTTGCACCGTCTGCCAGAGGGGCTTCGCTCGCTCCTACAAGCTGCAGCAGCACATGCGCATCCACAATGGCGAGCGACCCTACAAGTGTACCTACTGCGACAAGAGCTTCACGCAGTCCAATGATCTAACTCTACACATACGTCGACATACGGGCGAACGTCCCTATCAGTGCAACACATGCGGCGAAAGATTTATTCAGGGCACAGCTTTAAAAAATCACCGACTTCAGAATGGTCACATCGAAACGGAAGTCGAAAAAGTAAAAGATGACTGA
Protein Sequence: MLLTNICRTCALQDDKLLVLSSRSKKHPENSICDMLHELTQNDPLLEHSDDKLPQHLCGPCLIQLEAAYAFVVQARQAQKLLLLQLRKGLQTKCLEELPIDISLEHIKTETDINLDADTNAQINVQLEDENADMEEDKEKGLSAVSASGFKCQPTSDSSSSEENVHNDDAEFKPPQLRRSARRSKPIMLSENKSTCDQEKIQPPVKRGRGRPARQNTTETINENGRHMCNVCGKTYSWYRDLQRHERIHFEQAAFVCQSCGKKFLRKDKYMFHLRTHEKQAVKVQALQMSSEWRYAERLYSSGRLKRVECKLCGLKCQRIQEMREHLASHVNIETLSNLSLDNDVIREQFGTQWDLQQIKQQVCMQISKGRDQLENFCAIVNAYGYELCLSDSDEELPGVLAQYQCLPCNASFTRKHRLIQHTLEEHTQTNETETPWVRCNICQIGFVCINLLEQHQRTQCLNPLKRYSCNNCPGKFIWLQNLQQHACSRLQQDQPKDYRKIQCCLCDAKLSSMVALRSHLLTHRDGHTGIDPQQHAAFFRTYFRDDIDCSLSELSTRIADDFQSQNYGRYFNACTGSGQELDINDSDTAFSDASSLHICGVCGESTERLIQLQKHQESKHNELDNRLPYICADCGSGFVADSLLQQHRRRICDKQQAKYNCSECRQRFYWLSNYERHMHLKHAVKHAGEAQVQTHKQTTKLQCTECEKVFIWPKDLTRHKRMHQSQVQFECTFCERKFHRKDNLKSHMRMHGEQQLDAFTITSEQQVTMQQSMPLVLSHLCRPNGCKQIQCMICLSHHTKISDLRTHLSSHQFVLQFSGDRGEPESISNICRALYPELSAPLDKQNLIMRIQSDLAKGLEFERFISITNEAGNELSLDSSETDTDSDSADNKQSSSGRQYTCELCQVRVTRKHQLYSHQLEQHTWEQAAHVCSHCQARFVNEQLLEHHYRTLCRNAQRRFLCRKCPLRFRWRDNLKLHTDVAHQDGKLQGQGNVKTQLNGSRMLPVISYDCMECKRSFKMQKDLTRHTLMHTQDSSIYRCHWCARRFYRESNLLQHIERHGISADQLPYAEALLTANRHPHGQKCIQCKVCEISFTSIAALRSHLGSAPVGTHHAIESMLNYSITDQLGYELHLDDSETDEEAKPDGTPAHYTCGMCQLRCVRKFELQQHQQAMHRLERISEGCQLCIFKSVSPDLIAYHRRVLCGNTEKKFKCSKCSYKFMWQSNLEQHMQLQHPSSGEPTSIPVPDNGNSESQIFQCGQCPSKYNRKDRLTAHVKKCHADGATASKKSPAIPAKQQKTFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQRGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRLQNGHIETEVEKVKDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01323519;
90% Identity: iTF_01328020; iTF_01327297;
80% Identity: -