Sbul001365.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sarcophaga bullata
Gene Symbol
sip1
Assembly
GCA_005959815.1
Location
QOCX01000085.1:503245-506580[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-95 2.2e-91 306.0 14.2 1 275 416 686 416 686 0.99
2 2 0.25 1.9e+03 -2.1 0.0 243 261 699 717 691 734 0.57

Sequence Information

Coding Sequence
atgTCGGATAATGAATACGAACGTTTCGAAATAACGGATTATGATTTGCAAAACGAATTCAATACCAATAGACCACGCAGATATTTAACCAAAGAGGAGCAGATTTATGGAATCTGGGCTAGTGATAGCGATAACGATGACAGAAAATCATCCCGCAGACGCCATGGTTCAACTGGCATTTCTAAAGGCCATTCGGGCAGTAAAGACTATACCGCACCCGTAAGTTTTGTGGCCGGTGGCATACAGCAGTCaggtaagaagaagaagaaggatgATAGTGCGGATAGTGACGAAGGGAGTCCTATAACCGATGAAGAGGATACAATGCAAAGCCGGCCTGGCTTTGGTGCTGGGGCCAAACAAAATCTAATGGATGTAGATTCGGCTCATACTAGTGAGGACTCCGAAGAAGATGTGGACAttagaaaaaaccaacaaccgACAAAACAAAAGCCTTCGTACTATAATTCCAATCAAACAGGCAATTCTAAATTGGGAGCCTGGGAACAGCATACTAAGGGTATAGGAGCTAAACTATTGCTTCAAATGGGTTATAAACCAGGCAAGGGTTTAGGCAAAGACCTTCAGGGCATTTCCCAGCCTATAGAAGCTCGTGTGCGCAAGGGTAGAGGTGCTATAGGAGCTTATGGTTCTGAAAAACCTGCCAGTGTGGGTGGTAAAGGGcataCACCACAACTTGATGAGGATGCCCGGGAGGCCAAGGAGTTTAGGGAGAAgctaaacaaatggaaaaaggGAGGCGATAATAAACAGGATAAAGCGCCCAAACGCTACTACTACAGATCGGTGGAGGAAGTATTGGAAAAGGGCAAAAAcaccaattattttataaccgACAAAATGAGcaAAAAACTAGGCAATGTACCCGTAATCGATATGACTGGTCCCGAGAAACGTGTATTAAGTGGCTATCATGCAATAGGCCAAAGTCGCGTCATGGATGAAGATCTGTATGAGTTTAGTGAACAGCCCAAAAAATCAACTGCAACTGCCTTTGCTATGCCTGAGCTTATGCACAATCTCTCCTTCATAGTGGATATGTGCGAAAAGGATATTATTTCTTTGGACTCTGCTCAAACGGCTGCTGCCGATGGCCAAATTGTTTTGGAACAGGAAAAGAAACAATTGGAACAAATTGTTCAACTCGAAACTGCTCATATACATACTCTAGATAGAGTATTAGAACTAGTGGATGAGCTAACTGCACCTGACTCCCAATTGGATTTGGACAGGGCAGAGAAAATCTTTCTGGAATTACAGCAAAACTATGCACCCGAGTATCAACAATTTGGCATTGGCGATTTAGCTGCTGGTATTATAGCCCCATTGCTAAGGAACCATTTAGCGGAATGGAAACCATTGGAGAATCCTACTTTGTATGTGGACTTAATTAAGAAATGGCGTGTAATCTTAGAAGGTCATAATGCTAGACAAGAAGATAATCGTTCGAATGTCTTTGATCCTTATTCCTCTTTAATATGGGCTGGCCTTATACCCAGTTTTCGTTCTTGTGCTGAATTTTGGGATGCCAAACAGCATCATACTATGGCTGCTCTGTTAGATTGTTGGGCACCCTTGTTTCCCAGTTGGATATTGGATTCTGTGCTAGAACAGCTTATACTGCCACGCTTAAGTTCGGCGGTTAAAAATTGGGATCCTCTGACAGATACTGTGCCCATACACATGTGGATTTTACCTTGGAACACGATATTGGGCCATAAAATGGAGGAGTTTATATATCCTACCATCAGAGAAAAACTGGGCAATGCTTTGCTGGCCTGGTTGCCACAAGATCGTTCGGCCAGGGCGATGTTAACACCCTGGAAGGGTGCTTTTAACGATGAGGAAATGCAAGTGTTCCTGTTACAGCATATCATACCGAAATTGCAAATGGTTTTAACCGAGTTTGTTATTAATCCTCTGCAACAGGATTTGGAACCCTGGAATCAAGTGTGGGAGTGGCATGAACTCATACCCACGATACAAATGGCACAACTCTTGGATAAATTCTTCTTTCCGAAATGGATGCAGGTATTGGTCTTGTGGCTTAATCAATCACCAGACTATACGGAAATATCACGCTGGTATACGGGCTGGAAGAGTATGTTCTCCGAGGAGATTTTAAGAGAACCCAACATTAAAGAGCATCTGAGAAGAGCTCTCGAAATGATGCACAGGGCTACGGATCAATTAACTAATCCGGTTAACATAGGGCCGGTTGGCGGCAGTATAGGTGCCAATATAAATGCAACAGTGCCACCCccaccacaaccaccaccaccacctccatcGCTATTGGATCTACAAGTGCCAGCTCCAGCACAGTTGGAATTCAAAGAGTTGGTTTCACGTAAATGTGCTGAACGGGGAGTACTGTTTGCGCCTCTGCCAGGGCGCAGAGAAATGGGCAAACAAATCTATCGTGTGGGGAAATTGTATTGCTATATCGATCGTAATGTTTGTATGATAAGCGATGCTACGTTTAAGAACTGGATACCGACACCTTTGCAGCCTATGATCGATAGAGCCATAACGGGCATATTAAATTGA
Protein Sequence
MSDNEYERFEITDYDLQNEFNTNRPRRYLTKEEQIYGIWASDSDNDDRKSSRRRHGSTGISKGHSGSKDYTAPVSFVAGGIQQSGKKKKKDDSADSDEGSPITDEEDTMQSRPGFGAGAKQNLMDVDSAHTSEDSEEDVDIRKNQQPTKQKPSYYNSNQTGNSKLGAWEQHTKGIGAKLLLQMGYKPGKGLGKDLQGISQPIEARVRKGRGAIGAYGSEKPASVGGKGHTPQLDEDAREAKEFREKLNKWKKGGDNKQDKAPKRYYYRSVEEVLEKGKNTNYFITDKMSKKLGNVPVIDMTGPEKRVLSGYHAIGQSRVMDEDLYEFSEQPKKSTATAFAMPELMHNLSFIVDMCEKDIISLDSAQTAAADGQIVLEQEKKQLEQIVQLETAHIHTLDRVLELVDELTAPDSQLDLDRAEKIFLELQQNYAPEYQQFGIGDLAAGIIAPLLRNHLAEWKPLENPTLYVDLIKKWRVILEGHNARQEDNRSNVFDPYSSLIWAGLIPSFRSCAEFWDAKQHHTMAALLDCWAPLFPSWILDSVLEQLILPRLSSAVKNWDPLTDTVPIHMWILPWNTILGHKMEEFIYPTIREKLGNALLAWLPQDRSARAMLTPWKGAFNDEEMQVFLLQHIIPKLQMVLTEFVINPLQQDLEPWNQVWEWHELIPTIQMAQLLDKFFFPKWMQVLVLWLNQSPDYTEISRWYTGWKSMFSEEILREPNIKEHLRRALEMMHRATDQLTNPVNIGPVGGSIGANINATVPPPPQPPPPPPSLLDLQVPAPAQLEFKELVSRKCAERGVLFAPLPGRREMGKQIYRVGKLYCYIDRNVCMISDATFKNWIPTPLQPMIDRAITGILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01315496; iTF_01313801; iTF_01314672;
90% Identity
iTF_01313801;
80% Identity
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