Rros018935.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhingia rostrata
Gene Symbol
RHOBTB1
Assembly
GCA_949824845.1
Location
OX463757.1:105352252-105358542[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.4e-08 1.9e-05 25.5 0.1 7 45 260 299 254 322 0.80
2 3 5.1e-07 0.00021 22.1 0.1 51 99 393 440 371 447 0.83
3 3 5.4e-19 2.3e-16 60.6 0.1 9 103 482 575 476 582 0.92

Sequence Information

Coding Sequence
ATGGATAACGAACAGCCGCATCAAGAGTTGGTAAAGTGTGTTCTCGTCGGAGACACAGCTGTTGGAAAAACTCGTGTGATTTGTGCCAGAGCTTGCAATAAACATGTATCGTTATCGCAGCTGCTTTCAACGCATGTGCCAACCGTGTGGGCCATTGATCAATATAGGATATACAAGGATGTTCTCGAACGATCGTGGGAAGTGGTTGACGGAGTCAATGTATCTCTAAGACTCTGGGACACCTTCGGGGATCACGACAAAGATCGACGATTTGCATATGGAAGGTCCGATGtagttttattatgtttttcaaTAGCCAGTCCAACTTCATTAAGAAATTGTAAAGCAATGTGGTACCCGGAGATACGTCGCTTTTGTCCAGACACTCCAGTGATATTAGTAGGCTGCAAAAACGATTTACGGTACATGTACCGAGATGAGAAATATCTCTCGTACTTTGGCGAGCGTAGTCCATTTGTGAGAGCTGCCCTAAAAAGTGACCTAGTGATGCCAGATGAAGCAAGGGCTGTAGCCAAAGAGCTTGGAGTGGCTTATTACGAAACCAGTGTGTTCACATACTTTGGAGTAAATGAACTCTTTGAAAACGCCATACGATCAGCGTTAATCGCAAGACGACAACAACGCTTTTGGATGACAAACCTGAAAAAGGTCCAAAAACCGCTATTACAGgcgcCATTTCGTCCCCCAAAACCGCCACCACCAGAGGTAACTGTTGTTGTGGGCAACTACAAAAAGGACATGTACAGCATGTTAGTATCCCAGTGCTACACCGATCTAATCCTCATAGTGGGCTCAACCAAGTTTGCCGTTCATAAGTTTATGCTGGCTGCGGCTTCAAATGTCTTCTTTCGTCTGCTAACCACAGAACTCTCAGACATGGGTGGTAGAAGCAGTAGTGAATCGAGTATGATAAGTTCCACATTTGGTGAAGCGACAACAGCTGACTTTAACGACGACACCGAATGTCTAATACGCAACGAGTCTAGGACATTAAGAATGTGGGAACATTTGAAACGTCGATCCAGCTACCAAGCCCTACCACTAATCGAATCAAAGAAACCAACAGATATCTACAAGGATCTGCATCATCCGATTTTCCAAAATATACGCATCGTACAAATGGAGAACAATCGGGGAGTAAATGTTACCCAGACGATTGTCACCCTGACAAAGATTATCACACCACAAGCAATGAATCAGTGTCTTAAATTCATTTACACTGGCACAATTGAAAAGGAATTTCACAATCTTCAGGAAATAAAACAAGCAGCTGACTTCTTAGAACTGCCTCAATTAACACTGCTCCTCTCTAAGCCGCAAAATGTTTTAGCTAGTCTCTCAGAAGAACCAATTCAACACTATTGCTTAGTTATTGCTCAGAGCATCAAAGAGAATATGGAAAAGCATTGCATAGGCGATGGTTACTTTAGCGATGTGACATTCGAGCTCGACGACGGTCATATGAAGGCGCATCGTTCGATTTTGGTCGCACGATGTGATGTGATGAGAGCGATGCTGACTGGTGATTTTCGTGAAGCCCATTCTAGTGTTATTGTATTTCCAGGCGTCACAGTTTACACATTCCACAAACTGCTATGTTATCTATATACAGATGAGATACCTGCAATATCGGCTGATAAATGTCTTAATCTCTTGGAATTGGCAAACAGACTGTGTCTACCAAGGCTATTGAATTTGGTCGAGTGTCGGGTAATTGAGGACTTGACATTGATCTCTCAGAATGAGACTAACGAAACGGTTGATCATTGCCTAAAGCTGCTCGAACCAGTGAAGCTTCACAACGCACACCAATTGGCCGAATGGTGCATGTCGTATCTGTGTGTCAATTACAATATTATCTGTAAATTCTCACTCAAGGGACTAAAAGCCCTGCATCAGGATAATCAAGAATATTTACGTGAGCATCGATGGCCTCCAGTGTGGTATCTAAAAGACTATGACTACTACCAGCGATGCATCAACGAAATGAACAGAGAACTAAAGGATGCACGTGGTGATTCACCCAGTGACGACGAAGGATGCTTATGCTTTTCCGGAGGTAAAAATCGTCGGGGCGATGGTAATAACAACAGTGGCGGCGATAATGAAGCAACTCAAATGTTCAACAGCACTGCGAACTCAATAAATCACATTGACATGGAGCAGGAGGTCGACTTGAATCTCTGA
Protein Sequence
MDNEQPHQELVKCVLVGDTAVGKTRVICARACNKHVSLSQLLSTHVPTVWAIDQYRIYKDVLERSWEVVDGVNVSLRLWDTFGDHDKDRRFAYGRSDVVLLCFSIASPTSLRNCKAMWYPEIRRFCPDTPVILVGCKNDLRYMYRDEKYLSYFGERSPFVRAALKSDLVMPDEARAVAKELGVAYYETSVFTYFGVNELFENAIRSALIARRQQRFWMTNLKKVQKPLLQAPFRPPKPPPPEVTVVVGNYKKDMYSMLVSQCYTDLILIVGSTKFAVHKFMLAAASNVFFRLLTTELSDMGGRSSSESSMISSTFGEATTADFNDDTECLIRNESRTLRMWEHLKRRSSYQALPLIESKKPTDIYKDLHHPIFQNIRIVQMENNRGVNVTQTIVTLTKIITPQAMNQCLKFIYTGTIEKEFHNLQEIKQAADFLELPQLTLLLSKPQNVLASLSEEPIQHYCLVIAQSIKENMEKHCIGDGYFSDVTFELDDGHMKAHRSILVARCDVMRAMLTGDFREAHSSVIVFPGVTVYTFHKLLCYLYTDEIPAISADKCLNLLELANRLCLPRLLNLVECRVIEDLTLISQNETNETVDHCLKLLEPVKLHNAHQLAEWCMSYLCVNYNIICKFSLKGLKALHQDNQEYLREHRWPPVWYLKDYDYYQRCINEMNRELKDARGDSPSDDEGCLCFSGGKNRRGDGNNNSGGDNEATQMFNSTANSINHIDMEQEVDLNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01300123; iTF_00313554; iTF_00310337; iTF_00427329; iTF_00671649; iTF_00240834; iTF_00426466; iTF_00694754; iTF_01318339; iTF_00664164; iTF_00724868; iTF_00664933; iTF_00671013; iTF_00672902; iTF_01521190; iTF_01521958; iTF_00693927; iTF_01541512; iTF_00314410; iTF_01116522; iTF_01396618; iTF_01254027; iTF_00389708; iTF_00188237; iTF_00984333; iTF_01002863; iTF_00311889; iTF_01542290; iTF_00976596; iTF_00672277; iTF_00688757; iTF_01223509; iTF_00316054; iTF_00894039; iTF_00974807; iTF_00991895; iTF_00312696; iTF_00335161; iTF_00315258; iTF_01212058; iTF_00311131; iTF_00665756; iTF_01256482; iTF_00793609; iTF_00643299; iTF_00746789; iTF_00748295; iTF_00749767; iTF_00749032; iTF_00750541; iTF_01259274; iTF_00193633; iTF_00045410; iTF_00384643; iTF_01399555; iTF_00350244; iTF_00091397; iTF_01376709; iTF_01563845; iTF_00741958; iTF_01174342; iTF_01397542; iTF_00892839; iTF_01189575; iTF_01074568; iTF_01045545; iTF_01115084; iTF_00190733; iTF_00192877; iTF_00899694; iTF_01162318; iTF_00081327; iTF_01194479; iTF_01313071; iTF_01374159; iTF_00817520; iTF_00979409; iTF_01235825; iTF_00716786; iTF_00921490; iTF_00258963; iTF_00371155; iTF_00816627; iTF_01237747; iTF_00199956; iTF_00997812; iTF_01138100; iTF_01315573; iTF_01398581; iTF_00192150; iTF_00435638; iTF_00760182; iTF_01114326; iTF_01236791; iTF_01261079; iTF_00083032; iTF_00747545; iTF_00303866; iTF_01109402; iTF_01427547; iTF_01562971; iTF_00259836; iTF_00900700; iTF_01177020; iTF_00191421; iTF_00331581; iTF_01313887; iTF_01175200; iTF_00234055; iTF_01375931; iTF_00235001; iTF_01431015; iTF_01224681; iTF_00160815; iTF_00363343; iTF_00424749; iTF_00937389; iTF_01049761; iTF_00628454; iTF_01183911; iTF_01461255; iTF_00936658; iTF_00717886; iTF_00812878; iTF_01127570; iTF_01375029; iTF_00322646; iTF_01043951; iTF_00999740; iTF_01519414; iTF_00967278; iTF_00176500; iTF_00118786; iTF_00334251; iTF_00877199; iTF_00352564; iTF_01404984; iTF_01378458; iTF_00062011; iTF_00061193; iTF_00062860; iTF_01196049; iTF_01019518;
90% Identity
iTF_00176500;
80% Identity
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