Basic Information

Insect: Pseudomyrmex flavicornis
Gene Symbol: stc
Assembly: GCA_014825475.1
Location: QVNW01005116.1:6020-10396[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5 1.8e+04 -3.8 1.1 15 19 498 502 497 502 0.82

2 12 0.41 4.8e+03 -1.9 0.5 4 10 531 537 530 539 0.86

3 12 4.3e-06 0.051 14.0 14.8 3 18 546 561 533 562 0.84

4 12 3.3e-07 0.0038 17.6 15.7 1 18 598 615 598 616 0.98

5 12 8.3e-07 0.0097 16.3 8.7 1 18 654 671 654 672 0.96

6 12 1 1.2e+04 -3.2 0.7 5 10 701 706 701 706 0.94

7 12 1.5e-05 0.17 12.3 12.3 4 18 719 733 712 734 0.86

8 12 0.0089 1e+02 3.4 11.3 1 11 774 784 774 796 0.88

9 12 3.2e-09 3.7e-05 24.0 13.8 1 18 801 818 801 819 0.97

10 12 0.95 1.1e+04 -3.1 4.3 14 19 871 876 864 876 0.75

11 12 1.7e-07 0.002 18.5 9.4 1 16 912 927 912 937 0.87

12 12 5e-05 0.59 10.6 14.9 1 19 944 963 944 963 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5	1.8e+04	-3.8	1.1	15	19	498	502	497	502	0.82
2	12	0.41	4.8e+03	-1.9	0.5	4	10	531	537	530	539	0.86
3	12	4.3e-06	0.051	14.0	14.8	3	18	546	561	533	562	0.84
4	12	3.3e-07	0.0038	17.6	15.7	1	18	598	615	598	616	0.98
5	12	8.3e-07	0.0097	16.3	8.7	1	18	654	671	654	672	0.96
6	12	1	1.2e+04	-3.2	0.7	5	10	701	706	701	706	0.94
7	12	1.5e-05	0.17	12.3	12.3	4	18	719	733	712	734	0.86
8	12	0.0089	1e+02	3.4	11.3	1	11	774	784	774	796	0.88
9	12	3.2e-09	3.7e-05	24.0	13.8	1	18	801	818	801	819	0.97
10	12	0.95	1.1e+04	-3.1	4.3	14	19	871	876	864	876	0.75
11	12	1.7e-07	0.002	18.5	9.4	1	16	912	927	912	937	0.87
12	12	5e-05	0.59	10.6	14.9	1	19	944	963	944	963	0.96

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTGCCCAGAAGATCCAAATACTTTCGCGTATAGCAACCAGAATACATCTGGCAACACTGCGAACAACTGGTCACACTTCGCCAACAATATCGCGTGTCTGCAGAACGTGCCTACGGAAAGTTATTACACAAGAAACGGCAATCAATATCCATATCAAGAGCAGACCGGATCTACCGTCGCGTTTTGGCACTCGTCGAACGCAATGTCTTTAGGACATAGCCACCAGGAACATCTATTGCCAAACATCGCGTCTATCAACGATGCACAAATGTCAAGCAACAATTTTCAACACACTATAAGTGATATCCCTTCGACATCTTTGCACAATGTGTCGTCTTCTTCCGGTAACAATTACAATAAATCAAAGTGGATGAACAACCCGATGATTAGCAAGCATGTTCCAGCTGCAAAAAGCAATAGTGTCTTGTTCAACATAGTAGAGAACTCAACTTTGCATCCTTCAGCTAATGAATTTGTGCCGAACAATATCAAACCAAGAAAAGAAAAGTTTACTAAAAGGAACAGGTATAATGATGTAGTAAATAATACTTCTGATGCTGAAAGGCAAAACTTCAGATCCAAGTCATTTCCCAAGAATGCATACTTGTCAGATAATAGATACAAGAATAATTATAACTATAATAACAAGTTTCATTGTTCTACTAAGAAGGATGTGAATTACAAACAGAAGAATTTTCAAGATGCACAGATTCCACCAAAATCCAGCTACAAAGACACTCATAGAACTCACAATACAAGGAATTTCAACAAATTTCAAAACAGCAGATATTACAACAACAGAAAATATCAGTCAAACTCTTCTTTTGCGGAACAGAATGCTTTTGATGAAAGTTTTACATCAACAACTAAATTCACAGATATATCAAATACTCAAGATAATATATCTAGATCTTCTAATAAAGAGATACAAGAGAACAATTCATCTTTGAGTATGAAACATAATATAAATGAAGAGAAGACACTTATGCACCAAAATAATAATTCTGAAAACATATTGTCAGATGTTTTTGATATACAACAAAATAAATCTAAGCGATTACCTGCTAATGGATCTAATTATTACAAGTACAATGTTAATAATACACAAACTGAATTTAGTCCTAAACGTAGAACGGCAGCAACTTTGAGATGCACATATAGAAGAAACAATGAAGCGATATCAAATCAAAAAGAGACACAAGTAGATAATTGGAGAAATAGAACAGAAAAAGATGAGATAGCACAAGTGCAAAGAAAAAATCCTAAGAAAAAATATGAAAATGATAATCATGTGAGTCAAAGAGAGAGATTAACGGAACAGTTGAACAAAGGAACATTGGAGTGTCTAGTTTGTTATGAGCATATCAGACAAACCGATTATGTTTGGTTCTGCAGTAATTGTTATCATGTGTTGCATCTGAAATGCATCAAAAAGTGGGCAAGATCCTCACAAAGTGACAACGGTTGGAAGTGTCCGGCTTGTCGGGACGTCAGCTTCCAAGTTCCTGAAGATTACTTTTGCTTTTGTGGAAAAATGAAGATGCCGCAATGGAATCGCAGAGACGCGGCGCATACATGTGGCGGGATTTGCGGTCGAAAATTGACAAAAAATTGCAATCATAAATGCATTTTGCTTTGCCATCCCGGCTCCTGTCCGCAGTGCGAGGCAATGGTGACCAAGTATTGCGGCTGCGGAAGAACATCGCAGATGCTTCTGTGCAGCACTCAACAGTTGTTATTGTGCGACTCGATATGCAACAAGGTTCTGTCGTGCGGCAAACATTTTTGCCAGAAGAAATGCCATCATGGAGAGTGCGAACCTTGCGACAAAACTGTACAACAAACCTGCTTTTGTGGAAAAAAAACACAAGAAGTGCCTTGTCGAGCCAACGTCACGGATGTGTATTGCTGTAACAATGTCTGTAATAAACCGTTGGACTGCGGAAAGCATTATTGTCAAAAAGTCTGTCATTTGGAGCCCTGTGAGTTTTGCAACCTGGCGCCGGAAAGAGTTACTGTGTGTTGCTGCGGTCAAACACCTTTAACAGAAAAGAGAGAGAGCTGCTTAGATCCTGTGCCCACTTGCGATAAAATCTGTTCCAAGTCTCTGGCTTGCGGTCGACCTAGTAACCCGCATACTTGCAAGATGCAATGTCACACTGGCGATTGTCCCGAGTGCGATCTAAGCACGGAAGTCAAATGCCGATGTGGTAACATGAATCGTGAGATTCCTTGCCGGGACTTGACAAGCAAGGCCGATGACGCGCGTTGCGCGAAGCGTTGCAAGAAGAAGAGGTCCTGTGGCAAGCATAACTGCAATCAACTCTGTTGCATCGATATCGAGCATATTTGCCCGTTACCGTGCTCAAAGACTCTAAGCTGCGGTCGTCACAAGTGTCAGGAAAGATGTCACATAGGACGATGTCCTCCCTGTTTACAGAGCAGTTTTGATGAATTGTACTGTGAGTGCGGCGCTGAGGTGATCTACCCGCCGGTACCGTGTGGCACAAGGAGACCTATTTGCAATCGACCTTGTTCACGTCCACATTCTTGCGCTCATGAAGTGTTGCATAATTGTCACAGCGAACTTACTTGTCCACCTTGCACTGTGCTGACTCAGAGATGGTGCCACGGTAAACACGAGCTCAGAAAAGCCGTACCATGTCACGTGACTGAGCTTTCATGTGGTCTGCCCTGCAACAAGCAGTTGTCATGCGGACGGCACAAATGCATCAGAATGTGCCACGCTGGATCGTGTGAAATATCTGGGCAACAATGCACGCAGCCTTGTGGCACAAAAAGAGAACTATGCGGGCATATCTGCGGCGCTCCGTGTCACGAAGGCAAGTGTCCGGAGTTACCATGTAAAGAAGTAGTCAAGGTTACGTGTCAGTGCGGACATAGGACTTCGAGTCGTGTCTGCAATGAGAATGCACAAGAATACATGAAGATAATGAGCGTTTTGGTGGCTAGCAAAATGAAGGACATGCAACTTGGCCATTCGATCGATTTGGAGGAAGTGTACGGACAGAATGCAAAGAAGCAAAATCAGCTGAAGACTTTGGAGTGCAATGACGAGTGCAAAACGATCGAGAGAAACAGAAGACTCGCGTTGGGACTGCAGATTGTCAACCCAGATTTGAGCGGCAAATTGATGCCTCGATATACCGATTACTTGAAACAGTGGGCTAAAAGAGATCCGTTTTTCTGTCAAATGGTTCATGATAAACTAACGGAATTGGTACAGTTAGCGAAAACTTCCAAGCAGAAATCCCGGAGTTATTCGTTCGAAATTATGAATCGAGAAAAACGCCATTTCGTTCACGAGTTGTGTCAGCATTTTGGCTGCGAAAGTCAAGCATACGACGAGGAGCCGAAGAGAAATGTCGTTGCCACTGCCGTAAAAGATAAGTGTTGGTTACCGAGCTATAGCTTACTGGAAATAGTGCAGAGGGAGAAGGGGCAAAGAAAAGTTCCAGGACCGATACTGAACACTTCGATGGGAAATAGCTCTACAAAGACTGTTCTTTCATTACCTGCGAAACAAGGTCAACAATCGATGTCATTGTCAACAACTATAAAAACCCCCGACAAAGAAATCGATTATTTTGAATATCAAGGATAA
Protein Sequence: MATWDGSCPEDPNTFAYSNQNTSGNTANNWSHFANNIACLQNVPTESYYTRNGNQYPYQEQTGSTVAFWHSSNAMSLGHSHQEHLLPNIASINDAQMSSNNFQHTISDIPSTSLHNVSSSSGNNYNKSKWMNNPMISKHVPAAKSNSVLFNIVENSTLHPSANEFVPNNIKPRKEKFTKRNRYNDVVNNTSDAERQNFRSKSFPKNAYLSDNRYKNNYNYNNKFHCSTKKDVNYKQKNFQDAQIPPKSSYKDTHRTHNTRNFNKFQNSRYYNNRKYQSNSSFAEQNAFDESFTSTTKFTDISNTQDNISRSSNKEIQENNSSLSMKHNINEEKTLMHQNNNSENILSDVFDIQQNKSKRLPANGSNYYKYNVNNTQTEFSPKRRTAATLRCTYRRNNEAISNQKETQVDNWRNRTEKDEIAQVQRKNPKKKYENDNHVSQRERLTEQLNKGTLECLVCYEHIRQTDYVWFCSNCYHVLHLKCIKKWARSSQSDNGWKCPACRDVSFQVPEDYFCFCGKMKMPQWNRRDAAHTCGGICGRKLTKNCNHKCILLCHPGSCPQCEAMVTKYCGCGRTSQMLLCSTQQLLLCDSICNKVLSCGKHFCQKKCHHGECEPCDKTVQQTCFCGKKTQEVPCRANVTDVYCCNNVCNKPLDCGKHYCQKVCHLEPCEFCNLAPERVTVCCCGQTPLTEKRESCLDPVPTCDKICSKSLACGRPSNPHTCKMQCHTGDCPECDLSTEVKCRCGNMNREIPCRDLTSKADDARCAKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCPPCLQSSFDELYCECGAEVIYPPVPCGTRRPICNRPCSRPHSCAHEVLHNCHSELTCPPCTVLTQRWCHGKHELRKAVPCHVTELSCGLPCNKQLSCGRHKCIRMCHAGSCEISGQQCTQPCGTKRELCGHICGAPCHEGKCPELPCKEVVKVTCQCGHRTSSRVCNENAQEYMKIMSVLVASKMKDMQLGHSIDLEEVYGQNAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYLKQWAKRDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFEIMNREKRHFVHELCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEIVQREKGQRKVPGPILNTSMGNSSTKTVLSLPAKQGQQSMSLSTTIKTPDKEIDYFEYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01268677; iTF_01269482; iTF_01267955; iTF_01270880;
90% Identity: iTF_01267955;
80% Identity: -