Basic Information

Insect: Pseudomyrmex gracilis
Gene Symbol: stc
Assembly: GCA_002006095.1
Location: NW:37359-42636[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.5 8.4e+03 -3.8 1.1 15 19 503 507 502 507 0.82

2 12 0.36 2e+03 -1.7 0.5 4 10 536 542 535 544 0.86

3 12 8.4e-06 0.045 13.1 16.1 3 18 551 566 538 567 0.84

4 12 3.3e-07 0.0018 17.6 15.7 1 18 603 620 603 621 0.98

5 12 5e-07 0.0027 17.0 8.4 1 19 659 677 659 677 0.96

6 12 0.84 4.5e+03 -2.9 0.9 5 10 706 711 706 711 0.95

7 12 5.6e-06 0.03 13.6 11.8 4 18 724 738 717 739 0.86

8 12 0.0089 48 3.4 11.3 1 11 779 789 779 801 0.88

9 12 3.2e-09 1.7e-05 24.0 13.8 1 18 806 823 806 824 0.97

10 12 0.95 5.1e+03 -3.1 4.3 14 19 876 881 869 881 0.75

11 12 8.6e-08 0.00047 19.4 8.7 1 16 917 932 917 942 0.90

12 12 5e-05 0.27 10.6 14.9 1 19 949 968 949 968 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.5	8.4e+03	-3.8	1.1	15	19	503	507	502	507	0.82
2	12	0.36	2e+03	-1.7	0.5	4	10	536	542	535	544	0.86
3	12	8.4e-06	0.045	13.1	16.1	3	18	551	566	538	567	0.84
4	12	3.3e-07	0.0018	17.6	15.7	1	18	603	620	603	621	0.98
5	12	5e-07	0.0027	17.0	8.4	1	19	659	677	659	677	0.96
6	12	0.84	4.5e+03	-2.9	0.9	5	10	706	711	706	711	0.95
7	12	5.6e-06	0.03	13.6	11.8	4	18	724	738	717	739	0.86
8	12	0.0089	48	3.4	11.3	1	11	779	789	779	801	0.88
9	12	3.2e-09	1.7e-05	24.0	13.8	1	18	806	823	806	824	0.97
10	12	0.95	5.1e+03	-3.1	4.3	14	19	876	881	869	881	0.75
11	12	8.6e-08	0.00047	19.4	8.7	1	16	917	932	917	942	0.90
12	12	5e-05	0.27	10.6	14.9	1	19	949	968	949	968	0.96

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGTTCGTGCCCGGAGGATCCAAATATCCTCGTGTACTCCAATCGGAACACATCTGGCAACGCTGCGAACAACTGGCCACAGTTCGCCAGCAATATCGCTTGTCTGCGGAACGTGCCCGCGGATAGCTATTACACAAGAAACGGCAATCGGTATCCACATCAAGAACAGACCGGAACTACCATCGCGTTTTATCAGCAGCACTCGAACGCGATGATGTCTTTGGATCATAGCCGTCGTCAGGACCATTTACTGCCAAACGTCGCGTCTATCGACGACGCGCAAATGTCGAGCAACAATTTCCAACACTCCACGAGTGACATGCCTTCGACATCTCTGCACAACGTGTCTTCTTCCGGTGACAATTACAATAAGTCAAAATGGACAAACAATTCGGCGATCAGCAAGCATATTCCAGGTTCCGAGAACAATAGTGTCTTGTTTGACATAGTGGAGAATTCAAATTTGCATGCCTCAGCCAGTGAATTTGTGCCGAACGATATCAAaccgagaaaagaaaaatttaacaaaaggaataggtataataataataacgtagTGGATAATACTTCCGATAATACTGGTAGACAAAACTTCAGATCTTCTAAATCGTTTCCCAAGAACGCGTACTTGTCAGATAACAGATACAAGAACAATTATAACAACAGTAACAAGTTTTACTCTTCCGCTAAGAAGGATGTGAATTACAAACAGAAGAATTTTCAAGACCCACAGATTCCACCTACAAGATCCAGCTACAGAGATAATCAAAGAACTCCCAACGCAAGGAATTTcaacaaatttcaaaacagCAGATATTACAACAACAGAAAGCATCAGTCAAACTCTTCTCTTGCGGAACAGAATTCTTTCGATGAGAATTTTACATCAACATTCGCAGATACGTCAAATACTCAAGATAACACATCTAGGTCTTCTAACAAAGATGTTCGAGAGAACAATTCATCTTCGAGCGCGAAACATAACGCAAATGAAGAGAGGACACTTGTGCATCAGATTAATAATCATTCTAAAAACGCGTTATCGGATATTTCTGATGTACAGCAAAATAAATCTAAGCGATTATCTTCTAATGGATCTAATTATTACAAGTACAATTTTAATGATACACAAACCGAATTCGGCCCTAAATATAGAACGGCAGCAGCTTCGATGAAATGCGCGTATAGAAGAAACAATGAGGCAAATCAGAAGGAGACACAAGTAGATAACTGGAGAAGTAGAACAGAGAAAGATGAGACGGCACAAGCGCAAAGAAAAACTCccaagaaaaaatatgaaaatgATAATCATGTGagtcaaagagagagattaatgGAACAGTTGAACAAAGGAACGTTGGAGTGTCTAGTTTGTTACGAGCATGTCAAACAAACCGATTATGTTTGGTCCTGTTGTAATTGTTATCATGTGTTGCATCTGAAATGCATCAAGAAGTGGGCAAGATCCTCACAGAGTGATAACGGTTGGAAGTGTCCGGCTTGTCGGGACGTCAGCATACAAGTTCCTGAAGATTACTTTTGCTTTTGTGGAAAGATGAAGATACCGCAGTGGAATCGCAGAGATGTGGCGCATACATGCGGCGGGACTTGCGGTCgaaaactaacaaaaaattGCAATCATAAATGCACTTTGCTTTGCCATCCTGGCTCATGTCCGCAGTGCGAGGCAATGGTGACCAAGTATTGCGGCTGTGGAAGAACATCGCAGATGCTTCTGTGTAGCACCCAACAGCTGTTATTGTGCGACTCGATATGCAACAAGGTTCTGTCGTGCGGCAAACATTTCTGCCAGAAAAAATGCCATCATGGAGAGTGCGAACCTTGCGACAAAACTGTACAAcaaaCTTGcttttgtggaaaaaaaacacaagaagtGCCTTGTCGAGCCAACGTCACGGATATGTTTTGCTGTGACAATGTTTGTAACAAACCGTTGGACTGCGGTAAACATTATTGCCAAAAAGTCTGTCATTTGGAGCCTTGCGAATTTTGCAGCTTGGCACCAGAAAAAGTTACCGTGTGTTGCTGCGGTCAAACACCtttaacagaaaaaagagagagctgTTTAGATCCTGTGCCTACTTGCAACAAAATCTGTTCCAAGCCTCTGGCTTGCGGTCGGCCTAgTAATCCGCATACCTGTAAGATGCGATGTCACACTGGCGATTGTCCCGAGTGCGATCTAACTACGGAAGTTAAATGCCGATGCGGTAATATGAATCGCGAGATTCCTTGCCGAGACTTGACGAGCAAAGCCGACGACGCGCGTTGCGCGAAGCGTTGCAAGAAGAAGAGATCCTGCGGCAAGCATAACTGCAATCAGCTGTGTTGTATCGATATCGAGCATATTTGTCCGTTACCGTGCTCAAAGACCTTGAGTTGCGGTCGTCACAAGTGTCAGGAAAGATGTCACATAGGACGATGTCCTCCCTGTTTACAGAGCAGTTTCGACGAATTGTACTGCGAGTGCGGCGCTGAGGTGATCTACCCGCCAGTACCGTGCGGCACAAGAAGACCCGTTTGCAATCGACCTTGTTCACGTCCACATTCCTGCGCTCATGAGGTGTTGCATAATTGTCACAGCGAACTTACTTGTCCACCTTGCACCGTTCTGACTCAGAGATGGTGCCACGGTAAACACGAGCTCAGAAAAGCCGTACCGTGTCATGTGACCGAGCTCTCATGTGGTCTGCCTTGCAACAAACAGCTGTCTTGCGGACGTCACAAATGCATCAGAATGTGCCACGCTGGATCGTGCGAATCATCTGGACAACAATGCATGCAACCTTGCGCTATAAAGAGAGAACTATGCGGGCATATCTGCGGTGCTCCGTGCCACGAAGGCAAGTGTCCGGAGTTGCCGTGTAAAGAAGTGGTTAAgGTTACGTGTCAGTGTGGACATAGGACTTCGAGTCGTGTCTGCAATGAGAATGCGCAGGAATATATGAAGATAATGAGCGTCCTGGTGGCTAGCAAAATGAAGGACATGCAGCTTGGCCATTCGATTGACCTGGAAGAAGTGTACGGTCAGAATGCAAAGAAGCAGAATCAGCTAAAGACTTTGGAGTGCAACGACGAGTGCAAAACGATCGAGAGAAACAGAAGACTCGCTTTAGGACTGCAGATCGTCAATCCAGATTTGAGCGGCAAATTGATGCCCCGATATACCGATTACTTGAAACAGTGGGCCAAGAGAGATCCGTTCTTCTGTCAAATGGTTCATGACAAACTGACGGAATTGGTGCAGTTAGCGAAAACTTCTAAGCAGAAATCCCGAAGTTATTCGTTCGAGGTTATGAATCGTGAAAAGCGCCATTTTGTTCACGAGTTGTGTCAGCACTTTGGCTGCGAAAGTCAAGCTTACGACGAGGAACCGAAGAGAAATGTCGTTGCCACTGCCGTAAGAGATAAGTGTTGGTTACCGAGTTATAGCTTGCTGGAGATAGTTCAGAGGGAGAAGGGGCAAAGAAAAGTTCCAGGACCGGTGCTAAACACTTCGATAGGAAATAGCTCCacgaaGACTGTTCTTTCGTTACCTGCGAAACAAGGTCAACAATCGATGTCAACAAGTGTAAAAACCCCTGACAAAGAAATCGATTATTTTGAATATCAAGGATAA
Protein Sequence: MATWDGSCPEDPNILVYSNRNTSGNAANNWPQFASNIACLRNVPADSYYTRNGNRYPHQEQTGTTIAFYQQHSNAMMSLDHSRRQDHLLPNVASIDDAQMSSNNFQHSTSDMPSTSLHNVSSSGDNYNKSKWTNNSAISKHIPGSENNSVLFDIVENSNLHASASEFVPNDIKPRKEKFNKRNRYNNNNVVDNTSDNTGRQNFRSSKSFPKNAYLSDNRYKNNYNNSNKFYSSAKKDVNYKQKNFQDPQIPPTRSSYRDNQRTPNARNFNKFQNSRYYNNRKHQSNSSLAEQNSFDENFTSTFADTSNTQDNTSRSSNKDVRENNSSSSAKHNANEERTLVHQINNHSKNALSDISDVQQNKSKRLSSNGSNYYKYNFNDTQTEFGPKYRTAAASMKCAYRRNNEANQKETQVDNWRSRTEKDETAQAQRKTPKKKYENDNHVSQRERLMEQLNKGTLECLVCYEHVKQTDYVWSCCNCYHVLHLKCIKKWARSSQSDNGWKCPACRDVSIQVPEDYFCFCGKMKIPQWNRRDVAHTCGGTCGRKLTKNCNHKCTLLCHPGSCPQCEAMVTKYCGCGRTSQMLLCSTQQLLLCDSICNKVLSCGKHFCQKKCHHGECEPCDKTVQQTCFCGKKTQEVPCRANVTDMFCCDNVCNKPLDCGKHYCQKVCHLEPCEFCSLAPEKVTVCCCGQTPLTEKRESCLDPVPTCNKICSKPLACGRPSNPHTCKMRCHTGDCPECDLTTEVKCRCGNMNREIPCRDLTSKADDARCAKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCPPCLQSSFDELYCECGAEVIYPPVPCGTRRPVCNRPCSRPHSCAHEVLHNCHSELTCPPCTVLTQRWCHGKHELRKAVPCHVTELSCGLPCNKQLSCGRHKCIRMCHAGSCESSGQQCMQPCAIKRELCGHICGAPCHEGKCPELPCKEVVKVTCQCGHRTSSRVCNENAQEYMKIMSVLVASKMKDMQLGHSIDLEEVYGQNAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYLKQWAKRDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFEVMNREKRHFVHELCQHFGCESQAYDEEPKRNVVATAVRDKCWLPSYSLLEIVQREKGQRKVPGPVLNTSIGNSSTKTVLSLPAKQGQQSMSTSVKTPDKEIDYFEYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01270196;
90% Identity: -
80% Identity: -