Basic Information

Insect: Pseudomyrmex elongatus
Gene Symbol: stc
Assembly: GCA_014825605.1
Location: QVNY01026448.1:1-4339[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.2 3.6e+04 -3.7 1.1 15 19 501 505 500 505 0.82

2 13 0.046 7.7e+02 1.7 0.2 4 10 534 540 533 542 0.95

3 13 1.9e-06 0.032 15.7 12.5 3 18 549 564 548 565 0.94

4 13 4.6e-07 0.0077 17.7 15.7 1 18 601 618 601 619 0.98

5 13 1.6e-06 0.026 16.0 8.1 1 19 657 675 657 675 0.96

6 13 1.4 2.4e+04 -3.1 0.7 5 10 704 709 704 709 0.94

7 13 1.8e-05 0.3 12.6 11.8 4 18 722 736 715 737 0.86

8 13 0.012 2e+02 3.6 11.3 1 11 777 787 777 799 0.88

9 13 4.5e-09 7.5e-05 24.1 13.8 1 18 804 821 804 822 0.97

10 13 2.8 4.7e+04 -4.0 0.6 6 10 851 855 851 856 0.82

11 13 1.3 2.2e+04 -3.0 4.3 14 19 874 879 867 879 0.75

12 13 1.7e-07 0.0029 19.0 8.8 1 16 915 930 915 940 0.88

13 13 7.1e-05 1.2 10.7 14.9 1 19 947 966 947 966 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.2	3.6e+04	-3.7	1.1	15	19	501	505	500	505	0.82
2	13	0.046	7.7e+02	1.7	0.2	4	10	534	540	533	542	0.95
3	13	1.9e-06	0.032	15.7	12.5	3	18	549	564	548	565	0.94
4	13	4.6e-07	0.0077	17.7	15.7	1	18	601	618	601	619	0.98
5	13	1.6e-06	0.026	16.0	8.1	1	19	657	675	657	675	0.96
6	13	1.4	2.4e+04	-3.1	0.7	5	10	704	709	704	709	0.94
7	13	1.8e-05	0.3	12.6	11.8	4	18	722	736	715	737	0.86
8	13	0.012	2e+02	3.6	11.3	1	11	777	787	777	799	0.88
9	13	4.5e-09	7.5e-05	24.1	13.8	1	18	804	821	804	822	0.97
10	13	2.8	4.7e+04	-4.0	0.6	6	10	851	855	851	856	0.82
11	13	1.3	2.2e+04	-3.0	4.3	14	19	874	879	867	879	0.75
12	13	1.7e-07	0.0029	19.0	8.8	1	16	915	930	915	940	0.88
13	13	7.1e-05	1.2	10.7	14.9	1	19	947	966	947	966	0.96

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTGTCCAGAAGATCCAAATACCCTCGTGTACAGTAACCAGAATACATCTGGCAACACTGCGAATAACTGGCCACACTTCGCCAACAATATCGCGTGTCTGCAGAACGTGCCTGCGGAAAGTTATTACAGAAGAAACGGCAGTCGGTATCCATACCAAGAGTGCGAGCAAACCGGGTCTACCGTCGCGTTTTGGCACTCATCGAACGCAATGTCTTTAGGACATAGCCACCAGGAATATCTATTGCCAAACATCGCGTCAATCAGTGATGCACAAATGTCAAGCAACAATTTTCAACACTCCATGAGTGATATCCCTTCGACATCTTTAAACAATGTGTCGTCGTCTTCCAGTGACAATTACGATAAATCAAAGTGGATGAACAACCCGATGGTCAAGCATGTTTCAGCCGCAGGAAGCGATAGTGTTTTGTTTGACATAGTAGAGAACTCAACTTTGCATCCTTCAGCTAATGAATTTGTGCCGAACAATATCAAGCCAAGAAAAGAGAAATTTAAAAGGAACAGGTACAATGATGTAGTAGATAATACTTCCGATGCTGGTAGGCAAAACTTCAGATCCAAGTCATTTCCCAAGAATGCATACTTGTCAGATAATAGATACAAGAGTAATTATAACTATAGTAACAAGTTTTACTGTTCTACTAAGAAGGATGTGAATTGCAAACAGAAGAATTTTCAAGATGCACAGATTCCACCAAAATCTAGCTACAAAGACACTCATAGAACTCACAACACAAGAAATTTCAACAAATTTCAAAACAGCAGATATTACAACAACAGAAAGTATCAGTCAAACTCTTCTCTTGCAAAACAGAATGCTTTTGATGAAAGTTTTACATCAACAACTAAATTCACAGATATATCAAATACTCGAGATAATATATCTAGGTCTTCTAATAAAGAGATACGAGAAAACAATTCATCTTTGAGTATGAAACATAACATAAATGAAGAGAAGACACTTGTGCAGCAAAAAAGTAATAATTCTGAAAATGCATTGTCGGATGTTTCCGATATACGACAAAATAAATCTAAGCGATTACCTGCTAATTATGGATCTAATTATTACAAGTACAATTTTAATGATACACAAACTGAATTCAGTCCTAAACGTAGAACGGCAGCAACTTTGATGAAGTGTACGTATAGAAGAAACAATGAAGCGATATCAAATCAAAAAGAGACACAAGTAGATAATTGGAGAAATAGAACAGAGAAAGATGAGACGGCACAAGCACAAAGAAAACATCCCAAGAAAAAATACGAAAATGATAATCATGTGAGTCAAAGAGAAAGATTAACGGAACAGTTGAACAAAGGAACGTTGGAGTGTCTAGTTTGTTATGAGCATATCAGACAAACCGATTATGTTTGGTCCTGCAGTAATTGTTATCATGTGTTGCATCTGAAATGCATCAAGAAGTGGGCAAGATCCTCACAAAGTGACAACGGTTGGAAGTGTCCGGCTTGTCGGGACGTCAGTTTCCAAGTTCCTGAAGATTACTTTTGCTTTTGTGGAAAGATGAAAATGCCGCAGTGGAATCGCAGAGACGCGGCGCATACATGTGGCAGGATTTGCGGTCGAAAATTGACAAAAAATTGCAATCATAAATGCATTTTGCTTTGCCATCCTGGCTCCTGTCCGCAGTGCGAGGCAATGGTGACTAAGTATTGCGGCTGTGGAAGAACATCGCAGATGCTTCTGTGCAGCACTCAACAGTTGTTATTGTGCGATTCGATATGCAACAAGATTCTGTCGTGCGGTAAACATTTCTGCCAGAAGAAATGCCATCATGGAGAGTGCGAACCTTGCGACAAAACTGTACAGCAAACCTGCTTTTGTGGAAAAAAAACACAAGAAGTGCCTTGTCGAGCCAACGTCACGGATATGTATTGCTGTAACAATGTCTGTAATAAACCGTTGGACTGCGGAAAGCATTATTGTAAAAAAGTCTGTCATTTGGAGCCCTGCGAGTTTTGCAGCCTGGCGCCGGAAAGAGTTACTGTGTGTTGCTGCGGTCAAACACCTTTAACAGAAAAGAGAGAGAGCTGCTTAGATTCTGTGCCCACTTGCGATAAAATCTGTTCCAAATCTCTGGCTTGCGGTCGACCTAGTAACCCGCATACCTGCAAGATGCAATGTCACGCTGGCGATTGTCCCGAGTGCGATTTAAACACGGAAGTCAAATGCCGATGTGGTAACATGAATCGTGAGATTTCTTGCCGAGACTTGACGAGCAAGGCCGATGACGCGCGTTGCGCGAAGCGTTGCAAGAAGAAGAGGTCCTGTGGCAAGCATAACTGCAATCAACTCTGTTGCATCGATATTGAGCATATTTGTCCGTTACCGTGCTCAAAGACTCTAAGCTGCGGTCGTCACAAGTGTCAGGAAAGATGTCACATAGGACGATGTCCTCCTTGTTTACAGAGCAGTTTTGATGAATTGTACTGTGAGTGCGGCGCTGAAGTGATCTACCCGCCAGTACCGTGCGGCACAAGAAGACCTGTTTGCAATCGACCTTGTTCACGTCCACATTCCTGCGCTCATGAAGTGTTGCATAATTGTCACAGCGAACTTACTTGTCCACCTTGTACTGTGCTGACTCAGAGATGGTGCCACGGTAAACACGAACTTAGAAAAGCCGTACCATGTCACGTGACTGAGCTTTCATGCGGTCTGCCTTGCAACAAGCAGCTGTCATGCGGACGGCACAAATGCATCAGAATGTGCCACGCTGGATCGTGTGAAATATCTGGGCAACAATGCATGCAGCCTTGTGGCACAAAAAGAGAACTATGCGGGCATATCTGCGGCGCTCCGTGCCACGAAGGCAAGTGTCCGGAGTTACCATGTAAAGAAGTGGTCAAGGTTACATGTCAGTGTGGACATAGGACTTCGAGTCGTGTCTGCAATGAGAATGCACAAGAATATATGAAGATAATGAGCGTCCTAGTGGCTAGCAAAATGAAGGACATGCAGCTTGGCCATTCGATCGATTTGGAAGAAGTGTACGGACAGAATGCAAAGAAGCAAAATCAGCTGAAGACTTTGGAGTGCAATGACGAGTGCAAAACGATCGAGAGAAACAGAAGACTCGCGTTGGGACTGCAGATCGTCAATCCAGATTTGAGCGGCAAATTGATGCCTCGATATACCGATTACTTGAAACAGTGGGCCAAAAGAGATCCGTTCTTCTGTCAAATGGTTCATGATAAACTGACGGAATTGGTACAATTAGCGAAAACTTCCAAGCAGAAATCCCGGAGTTATTCGTTCGAAATTATGAATCGTGAAAAACGCCATTTCGTTCACGAGTTGTGTCAGCATTTTGGCTGCGAAAGTCAAGCATACGACGAGGAGCCGAAGAGAAATGTCGTTGCCACTGCCGTAAAAGATAAG
Protein Sequence: MATWDGSCPEDPNTLVYSNQNTSGNTANNWPHFANNIACLQNVPAESYYRRNGSRYPYQECEQTGSTVAFWHSSNAMSLGHSHQEYLLPNIASISDAQMSSNNFQHSMSDIPSTSLNNVSSSSSDNYDKSKWMNNPMVKHVSAAGSDSVLFDIVENSTLHPSANEFVPNNIKPRKEKFKRNRYNDVVDNTSDAGRQNFRSKSFPKNAYLSDNRYKSNYNYSNKFYCSTKKDVNCKQKNFQDAQIPPKSSYKDTHRTHNTRNFNKFQNSRYYNNRKYQSNSSLAKQNAFDESFTSTTKFTDISNTRDNISRSSNKEIRENNSSLSMKHNINEEKTLVQQKSNNSENALSDVSDIRQNKSKRLPANYGSNYYKYNFNDTQTEFSPKRRTAATLMKCTYRRNNEAISNQKETQVDNWRNRTEKDETAQAQRKHPKKKYENDNHVSQRERLTEQLNKGTLECLVCYEHIRQTDYVWSCSNCYHVLHLKCIKKWARSSQSDNGWKCPACRDVSFQVPEDYFCFCGKMKMPQWNRRDAAHTCGRICGRKLTKNCNHKCILLCHPGSCPQCEAMVTKYCGCGRTSQMLLCSTQQLLLCDSICNKILSCGKHFCQKKCHHGECEPCDKTVQQTCFCGKKTQEVPCRANVTDMYCCNNVCNKPLDCGKHYCKKVCHLEPCEFCSLAPERVTVCCCGQTPLTEKRESCLDSVPTCDKICSKSLACGRPSNPHTCKMQCHAGDCPECDLNTEVKCRCGNMNREISCRDLTSKADDARCAKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCPPCLQSSFDELYCECGAEVIYPPVPCGTRRPVCNRPCSRPHSCAHEVLHNCHSELTCPPCTVLTQRWCHGKHELRKAVPCHVTELSCGLPCNKQLSCGRHKCIRMCHAGSCEISGQQCMQPCGTKRELCGHICGAPCHEGKCPELPCKEVVKVTCQCGHRTSSRVCNENAQEYMKIMSVLVASKMKDMQLGHSIDLEEVYGQNAKKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLMPRYTDYLKQWAKRDPFFCQMVHDKLTELVQLAKTSKQKSRSYSFEIMNREKRHFVHELCQHFGCESQAYDEEPKRNVVATAVKDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01270196;
90% Identity: iTF_01267955;
80% Identity: -